BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011935
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-l...    94   1e-17
ref|XP_003573245.1| PREDICTED: high mobility group B protein 7-l...    82   5e-14
ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis tha...    80   1e-13
ref|NP_001190371.1| high-mobility group B6 protein [Arabidopsis ...    80   1e-13
ref|NP_001060758.1| Os08g0101100 [Oryza sativa Japonica Group] g...    80   2e-13

>ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
           gi|147815109|emb|CAN61363.1| hypothetical protein
           VITISV_034306 [Vitis vinifera]
           gi|297742725|emb|CBI35359.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/104 (50%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
 Frame = +1

Query: 220 RKRVEAQAASLKRARDGSAFVRCEECNKDVAAALIGMHNCSSEAKLKTNLEALVVENQTE 399
           RKRVEA+ +SLKRARDGSAF+RCEEC KDV   LI MH+CS EAK+K NLEA VVE  T+
Sbjct: 7   RKRVEAETSSLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVVEKVTD 66

Query: 400 I------XXXXXXXXXXXXXXXXXXXXXXXXXXXRPPTAFFVFM 513
           +                                 RPPTAFF+FM
Sbjct: 67  VKKKPAEKKNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFM 110


>ref|XP_003573245.1| PREDICTED: high mobility group B protein 7-like [Brachypodium
           distachyon]
          Length = 218

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/106 (46%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
 Frame = +1

Query: 214 TVRKRVEAQAASLKRARDGSAFVRCEECNKDVAAALIGMHNCSSEAKLKTNLEALVVENQ 393
           T RKRVEA  A LKRARDGSAF RCE CNK+V   LI +H+CS ++K++T+LEA VVE  
Sbjct: 9   TARKRVEA--AVLKRARDGSAFTRCEGCNKNVPVVLIDLHSCSLDSKIRTSLEAQVVEKT 66

Query: 394 TEI------XXXXXXXXXXXXXXXXXXXXXXXXXXXRPPTAFFVFM 513
            EI                                 RPPTAFF+FM
Sbjct: 67  VEISKPEKKRKAPSSAAAGKGSKKGKSGAGAKNGKKRPPTAFFIFM 112


>ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis thaliana]
           gi|75245985|sp|Q8LDF9.1|HMGB7_ARATH RecName: Full=High
           mobility group B protein 7; AltName:
           Full=Nucleosome/chromatin assembly factor group D 07;
           Short=Nucleosome/chromatin assembly factor group D 7
           gi|21554154|gb|AAM63233.1| unknown [Arabidopsis
           thaliana] gi|26452394|dbj|BAC43282.1| unknown protein
           [Arabidopsis thaliana] gi|332005781|gb|AED93164.1|
           high-mobility group B6 protein [Arabidopsis thaliana]
          Length = 241

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
 Frame = +1

Query: 220 RKRVEAQAAS-----LKRARDGSAFVRCEECNKDVAAALIGMHNCSSEAKLKTNLEALVV 384
           RKRVEA+ +S     L+RA+DGSAF  CE CNK VA ALI MHNCS +AK++ NLEA VV
Sbjct: 14  RKRVEAETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNLEAQVV 73

Query: 385 ENQTE 399
           E Q E
Sbjct: 74  ETQAE 78


>ref|NP_001190371.1| high-mobility group B6 protein [Arabidopsis thaliana]
           gi|332005782|gb|AED93165.1| high-mobility group B6
           protein [Arabidopsis thaliana]
          Length = 157

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
 Frame = +1

Query: 220 RKRVEAQAAS-----LKRARDGSAFVRCEECNKDVAAALIGMHNCSSEAKLKTNLEALVV 384
           RKRVEA+ +S     L+RA+DGSAF  CE CNK VA ALI MHNCS +AK++ NLEA VV
Sbjct: 14  RKRVEAETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNLEAQVV 73

Query: 385 ENQTE 399
           E Q E
Sbjct: 74  ETQAE 78


>ref|NP_001060758.1| Os08g0101100 [Oryza sativa Japonica Group]
           gi|38637289|dbj|BAD03552.1| putative HMG type
           nucleosome/chromatin assembly factor D [Oryza sativa
           Japonica Group] gi|113622727|dbj|BAF22672.1|
           Os08g0101100 [Oryza sativa Japonica Group]
           gi|125601889|gb|EAZ41214.1| hypothetical protein
           OsJ_25719 [Oryza sativa Japonica Group]
           gi|213959174|gb|ACJ54921.1| HMG type
           nucleosome/chromatin assembly factor [Oryza sativa
           Japonica Group] gi|215697671|dbj|BAG91665.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 203

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/99 (47%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +1

Query: 220 RKRVEA-QAASLKRARDGSAFVRCEECNKDVAAALIGMHNCSSEAKLKTNLEALVVENQT 396
           RKRVEA  +A LKRARDGSAF RCE C K V+  LI MHNCS + K++ +LEA VVE   
Sbjct: 10  RKRVEATDSAVLKRARDGSAFTRCEACGKSVSVVLIDMHNCSLDDKIRISLEAQVVEQAV 69

Query: 397 EIXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPTAFFVFM 513
           E+                           RPPTAFF+FM
Sbjct: 70  EV-----AASKKKSGKNNNNNGEGAKKGKRPPTAFFLFM 103