BLASTX nr result

ID: Bupleurum21_contig00011934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011934
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259...   113   2e-23
ref|XP_002510535.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_004136491.1| PREDICTED: uncharacterized protein LOC101222...    89   5e-16
ref|XP_003535135.1| PREDICTED: uncharacterized protein LOC100812...    87   2e-15
ref|NP_173427.1| cytomatrix protein-like protein [Arabidopsis th...    86   4e-15

>ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259217 [Vitis vinifera]
           gi|302142661|emb|CBI19864.3| unnamed protein product
           [Vitis vinifera]
          Length = 379

 Score =  113 bits (283), Expect = 2e-23
 Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 14/150 (9%)
 Frame = -3

Query: 576 LTSMEQLQASNTEKDNLITNLKTNMAKLEADSLSKTKEIARLSKELESVKKSRSDPVTPE 397
           L  MEQL++ N EKD+ I  LKT++AK+E ++  K +EI+RLSKE+E ++KSRS  VTP 
Sbjct: 229 LVGMEQLESLNNEKDDKIVKLKTDLAKMETETKKKNEEISRLSKEVELLRKSRSASVTPI 288

Query: 396 LRRCTSEGRVQLGGKNSIAQNKNVTVKKELNSSQV--------------VKQGSRNSKRK 259
           L RCT + +    GKN     +N+++KKE  +S+                ++ SR SKRK
Sbjct: 289 LNRCTEKQKTSGQGKNKSWIGRNISIKKETPASEKNTEKKKESSVSEKNTEKKSRGSKRK 348

Query: 258 TAASSSTLRPPSLMPSTFKAPKLKSSSPHV 169
               + T   P L  STFK PKLK+SSP +
Sbjct: 349 EINVTPTSETPRLFTSTFKIPKLKNSSPQI 378


>ref|XP_002510535.1| conserved hypothetical protein [Ricinus communis]
           gi|223551236|gb|EEF52722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 354

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
 Frame = -3

Query: 576 LTSMEQLQASNTEKDNLITNLKTNMAKLEADSLSKTKEIARLSKELESVKKSRSDPVTPE 397
           L S+E LQ+SN EKD + + LK  + ++E D     +E +RL +ELE +KKSRS  VTP 
Sbjct: 211 LASVELLQSSNNEKDEIFSKLKAKLTEMEVDRDKWKEENSRLLQELELLKKSRSAQVTPS 270

Query: 396 LRRCTSEGRVQLGGKNSIAQNK-NVTVKKELNSSQV------VKQGSRNSKRKTAASSST 238
           L+ C +  +       S  +++ NV VKKEL  ++         +GSR SKRK   + + 
Sbjct: 271 LKHCNTGAKASSRVVKSNGRSRSNVVVKKELCPAKAAPPLKDADKGSRGSKRKEVETITI 330

Query: 237 LRPPSLMPSTFKAPKLKSSSPHVT 166
           L  P L  ++FK PKLK SS  VT
Sbjct: 331 LETPKLFSASFKVPKLKISSTPVT 354


>ref|XP_004136491.1| PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus]
           gi|449505782|ref|XP_004162567.1| PREDICTED:
           uncharacterized LOC101222062 [Cucumis sativus]
          Length = 365

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 54/132 (40%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = -3

Query: 576 LTSMEQLQASNTEKDNLITNLKTNMAKLEADSLSKTKEIARLSKELESVKKSRSDPVTPE 397
           L ++EQLQ+SN EKD++I  L+  + K+E DS     EI+RLS +LE  +KS +   TP 
Sbjct: 232 LATLEQLQSSNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPV 291

Query: 396 LRRCTSEGRVQ-LGGKNSIAQNKNVTVKKELNSSQVVKQGSRNSKRKTAASSSTLRPPSL 220
           L+ C +  R   LGGKN      NV V K+  S+Q    G  N  ++ A   S    P L
Sbjct: 292 LKPCKAGLRTSGLGGKNGSRSRSNVIVNKDAYSAQPSHSG--NQMKRGAGDISDPGTPRL 349

Query: 219 MPSTFKAPKLKS 184
             S+FK PKLK+
Sbjct: 350 FTSSFKVPKLKN 361


>ref|XP_003535135.1| PREDICTED: uncharacterized protein LOC100812121 [Glycine max]
          Length = 226

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 57/142 (40%), Positives = 81/142 (57%), Gaps = 10/142 (7%)
 Frame = -3

Query: 576 LTSMEQLQASNTEKDNLITNLKTNMAKLEADSLSKTKEIARLSKELESVKKSRSDPVTPE 397
           ++SMEQLQ+ N EKD+ I+ L++ MA++EA++     EI+ LS ELES++K R+  VTP 
Sbjct: 81  VSSMEQLQSENYEKDSKISELQSKMAEMEAETKRLNNEISELSVELESLRKFRNSQVTPS 140

Query: 396 -LRRCTSEGRV-QLGGKNSIAQNKNVTVKKEL--------NSSQVVKQGSRNSKRKTAAS 247
            L RCT   +  + G   S    +N+T+KKE+          S      +++ KRK A  
Sbjct: 141 VLNRCTEGTKAPESGVVKSNKSRRNMTLKKEICTPDAPVPAKSSEKGTKTKSMKRKEAPV 200

Query: 246 SSTLRPPSLMPSTFKAPKLKSS 181
             T   P L  S FK PKLKSS
Sbjct: 201 IPTSETPKLFSSGFKVPKLKSS 222


>ref|NP_173427.1| cytomatrix protein-like protein [Arabidopsis thaliana]
           gi|28392994|gb|AAO41932.1| unknown protein [Arabidopsis
           thaliana] gi|28827278|gb|AAO50483.1| unknown protein
           [Arabidopsis thaliana] gi|332191798|gb|AEE29919.1|
           cytomatrix protein-like protein [Arabidopsis thaliana]
          Length = 342

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
 Frame = -3

Query: 576 LTSMEQLQASNTEKDNLITNLKTNMAKLEADSLSKTKEIARLSKELESVKKSRSDPVTPE 397
           ++  EQLQ+SN EKD  I+ LK  MA++E +S  K +EI++L+++LES KKSR    TP 
Sbjct: 208 ISYQEQLQSSNQEKDETISRLKAKMAEMETNSTKKDEEISKLTRDLESAKKSRG--FTPV 265

Query: 396 LRRCTSEGRVQLGGKNSIAQNKNVTVKKELNSSQVVKQG-SRNSKRKTAASS---STLRP 229
           L RCT   +      N      +++ KK+ +++    +  S++SKRK A +    S    
Sbjct: 266 LTRCTKLEK----RSNGNTVGSHISTKKDKSAASTTNEKVSKSSKRKRAKNMTPVSVSEV 321

Query: 228 PSLMPSTFKAPKLKSSS 178
           P L  STF+ PKLKS S
Sbjct: 322 PKLFTSTFRLPKLKSPS 338


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