BLASTX nr result

ID: Bupleurum21_contig00011918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011918
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E...   247   3e-63
ref|XP_002522779.1| cellulose synthase, putative [Ricinus commun...   232   1e-58
emb|CAN62859.1| hypothetical protein VITISV_036211 [Vitis vinifera]   228   2e-57
ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E...   227   4e-57
emb|CBI39755.3| unnamed protein product [Vitis vinifera]              227   4e-57

>ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max]
          Length = 736

 Score =  247 bits (631), Expect = 3e-63
 Identities = 122/213 (57%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
 Frame = +3

Query: 510  MLSKYSPARYGFGRMKTGHIMGYSVYLLWAPCSLPTLYYCIVPSLSLLTGISLFPQKSSM 689
            +LSKYSPA YGFGR+  G  MGYSVY LWAP  L TLYY I+PSL LL GI LFP+ SS 
Sbjct: 498  LLSKYSPAWYGFGRINFGLQMGYSVYCLWAPNCLATLYYSIIPSLYLLKGIPLFPKISSP 557

Query: 690  WFIPFAYIIISTCAYSLAEFLQCGGTFLGFWNDQRIWLYKRTSSYFFAIVDTLWRLVGHS 869
            WFIPFAY+I+    YSL EF  CGGTF G+WNDQRIWLYKRTSSY FA +DT+ +L G S
Sbjct: 558  WFIPFAYVIVGETTYSLLEFFFCGGTFQGWWNDQRIWLYKRTSSYLFACIDTILKLFGFS 617

Query: 870  NTTFTITSKVSDQDAYRRYEQNIMDFETPSPMITIXXXXXXXXXXXXXXXVMQVVMDFS- 1046
             +TFTIT+KV+++DA +R+E+ IM+F T SPM+T+               +   ++    
Sbjct: 618  ESTFTITTKVTEEDASKRHEKEIMEFGTSSPMLTVLATLALLNLFCFLSVLKDAILGEGD 677

Query: 1047 -RTFETMVIQIILCLFLVLINLPIYEALFLRKD 1142
               +ETM +Q++LC FLV INLPIY+ LFLRKD
Sbjct: 678  IGAYETMGLQVLLCGFLVFINLPIYQGLFLRKD 710



 Score =  158 bits (400), Expect = 2e-36
 Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   HDIYANSLKVICEVDFHGLDGWGGPLYIGTGCFHRRDTLCGRVFNNNQTRSEYWNKGNDQ 181
           +D+Y  SL  I EV+F GLDG+GGPLY GTGCFH+R++LCG  F++       WN  +DQ
Sbjct: 350 NDLYGGSLTSILEVEFPGLDGYGGPLYAGTGCFHKRESLCGMKFSDQYCND--WNSEDDQ 407

Query: 182 EIYKETSY-ELEERLKDLASCTFEKDTLWGNEVGLKYGCPVEDIITGISILCNGWKSVYY 358
             +KE +  ELE++ K LASC +E++TLWG E+GLKYGCPVED+ITG+SI C GWKSVYY
Sbjct: 408 --FKEANLQELEQQSKVLASCNYEENTLWGKEMGLKYGCPVEDVITGLSIQCQGWKSVYY 465

Query: 359 NPRR 370
           NP R
Sbjct: 466 NPPR 469


>ref|XP_002522779.1| cellulose synthase, putative [Ricinus communis]
            gi|223538017|gb|EEF39630.1| cellulose synthase, putative
            [Ricinus communis]
          Length = 728

 Score =  232 bits (592), Expect = 1e-58
 Identities = 119/211 (56%), Positives = 146/211 (69%)
 Frame = +3

Query: 510  MLSKYSPARYGFGRMKTGHIMGYSVYLLWAPCSLPTLYYCIVPSLSLLTGISLFPQKSSM 689
            +LSKYSPA Y  G++  G  +GY  Y LWAP SL TLYY I PSL LL GISLFPQ SS+
Sbjct: 496  LLSKYSPAWYANGKISLGLQLGYCCYCLWAPNSLATLYYTIFPSLCLLKGISLFPQVSSL 555

Query: 690  WFIPFAYIIISTCAYSLAEFLQCGGTFLGFWNDQRIWLYKRTSSYFFAIVDTLWRLVGHS 869
            WFIPFAY+I +   YSLAEFL  GGT LG+WN+QRIWLYKRT+SY FA +DT+ + VG S
Sbjct: 556  WFIPFAYVITAKYVYSLAEFLWSGGTSLGWWNEQRIWLYKRTTSYLFAFLDTILKTVGLS 615

Query: 870  NTTFTITSKVSDQDAYRRYEQNIMDFETPSPMITIXXXXXXXXXXXXXXXVMQVVMDFSR 1049
            +  F IT+KV+D D  +RYE+ IM+F   SPM TI               V +V+    R
Sbjct: 616  DLDFVITAKVADGDVLQRYEEEIMEFGVSSPMFTILATLAMLNLVCFVGVVKKVI----R 671

Query: 1050 TFETMVIQIILCLFLVLINLPIYEALFLRKD 1142
             +ETM +QI+LC  LVLINLP+Y+ LF+RKD
Sbjct: 672  IYETMSLQILLCGVLVLINLPLYKGLFVRKD 702



 Score =  166 bits (419), Expect = 1e-38
 Identities = 74/123 (60%), Positives = 97/123 (78%)
 Frame = +2

Query: 2   HDIYANSLKVICEVDFHGLDGWGGPLYIGTGCFHRRDTLCGRVFNNNQTRSEYWNKGNDQ 181
           +D+Y +SLKVI  V+FHG+DG+GGPLYIG+GCFHRRD LCGR F+ N    ++  K ++ 
Sbjct: 348 NDLYGSSLKVIANVEFHGVDGFGGPLYIGSGCFHRRDVLCGRKFSKN---CKFEWKNDEA 404

Query: 182 EIYKETSYELEERLKDLASCTFEKDTLWGNEVGLKYGCPVEDIITGISILCNGWKSVYYN 361
              K++  +LEE  K LASCT+E++T WGNE+GLKYGCPVED+ITG+SI C GWKSVY++
Sbjct: 405 LNAKQSIQDLEEETKPLASCTYEQNTQWGNEMGLKYGCPVEDVITGLSIQCKGWKSVYFS 464

Query: 362 PRR 370
           P R
Sbjct: 465 PER 467


>emb|CAN62859.1| hypothetical protein VITISV_036211 [Vitis vinifera]
          Length = 1181

 Score =  228 bits (581), Expect = 2e-57
 Identities = 115/211 (54%), Positives = 147/211 (69%)
 Frame = +3

Query: 510  MLSKYSPARYGFGRMKTGHIMGYSVYLLWAPCSLPTLYYCIVPSLSLLTGISLFPQKSSM 689
            +LSKYSPA YG GR+  G I+GY  Y LW   SL TL YCIVPSL LL GI LFPQ SS 
Sbjct: 759  LLSKYSPAWYGLGRISPGLILGYCTYCLWPLNSLATLSYCIVPSLYLLHGIPLFPQVSSP 818

Query: 690  WFIPFAYIIISTCAYSLAEFLQCGGTFLGFWNDQRIWLYKRTSSYFFAIVDTLWRLVGHS 869
            WF+PFAY+I++  + SLAEFL  GGT LG+WNDQRIWL+KRT+SY FA +DT+ RL+G S
Sbjct: 819  WFLPFAYVILAKYSGSLAEFLWSGGTLLGWWNDQRIWLFKRTTSYLFAFMDTILRLLGFS 878

Query: 870  NTTFTITSKVSDQDAYRRYEQNIMDFETPSPMITIXXXXXXXXXXXXXXXVMQVVMDFSR 1049
             T+F +T+KV+D+D  +RYE  +M+F   SPM TI               V +V +D   
Sbjct: 879  ETSFILTAKVADEDVSQRYEGEMMEFGGSSPMFTILATLAMLNLFCVVGVVKKVGLDM-E 937

Query: 1050 TFETMVIQIILCLFLVLINLPIYEALFLRKD 1142
             ++TM +QI+L + L+LIN P+Y+ LFLRKD
Sbjct: 938  VYKTMALQILLAVVLLLINWPLYQGLFLRKD 968



 Score =  168 bits (426), Expect = 2e-39
 Identities = 77/122 (63%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   HDIYANSLKVICEVDFHGLDGWGGPLYIGTGCFHRRDTLCGRVFNNNQTRSEYWNKGNDQ 181
           +++Y++SL+VI EV+FHGLDG+GGP+YIGTGCFHRRDTLCGR F+      +Y N+   +
Sbjct: 612 NELYSSSLRVISEVEFHGLDGYGGPMYIGTGCFHRRDTLCGRKFSK-----DYRNEWKRE 666

Query: 182 EIY-KETSYELEERLKDLASCTFEKDTLWGNEVGLKYGCPVEDIITGISILCNGWKSVYY 358
            I  +E+++EL+E LK+LASC +E DT WGNE+GLKYGCPVED+ITG+SI C GWKSVY 
Sbjct: 667 SIKTEESAHELQESLKNLASCRYEGDTQWGNEMGLKYGCPVEDVITGLSIQCLGWKSVYL 726

Query: 359 NP 364
           NP
Sbjct: 727 NP 728



 Score =  127 bits (320), Expect = 4e-27
 Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
 Frame = +3

Query: 681  SSMWFIPFAYIIISTCAYSLAEFLQCGGTFLGFWNDQRIWLYKRTSSYFFAIVDTLWRLV 860
            SS+WF+PFAY+ ++  AYS+ E + CG TF   WN +R+W+ +  +SY FA +D L  L 
Sbjct: 157  SSLWFLPFAYVFVAKNAYSILETVSCGETFKTLWNFERMWMMRSATSYLFAFIDNLIMLF 216

Query: 861  GHSNTTFTITSKVSDQDAYRRYEQNIMDFETPSPMITIXXXXXXXXXXXXXXXVMQVVMD 1040
            G S TTF IT+KV+D+D  +RY+  I++F + S   TI               + +V+ D
Sbjct: 217  GLSETTFVITAKVADEDVLKRYQHEIIEFGSSSLXFTIISTLALLNLFSSVGXIKKVIFD 276

Query: 1041 FS-RTFETMVIQIILCLFLVLINLPIYEALFLRKD 1142
               R    ++  +ILC   V++++P+YEALF+R D
Sbjct: 277  IEFRAAAGLIPHVILCGVTVMLHVPVYEALFVRND 311


>ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E1 [Vitis vinifera]
          Length = 922

 Score =  227 bits (579), Expect = 4e-57
 Identities = 115/211 (54%), Positives = 147/211 (69%)
 Frame = +3

Query: 510  MLSKYSPARYGFGRMKTGHIMGYSVYLLWAPCSLPTLYYCIVPSLSLLTGISLFPQKSSM 689
            +LSKYSPA YG GR+  G I+GY  Y LW   SL TL YCIVPSL LL GI LFPQ SS 
Sbjct: 492  LLSKYSPAWYGLGRISPGLILGYCTYCLWPLNSLATLSYCIVPSLYLLHGIPLFPQVSSP 551

Query: 690  WFIPFAYIIISTCAYSLAEFLQCGGTFLGFWNDQRIWLYKRTSSYFFAIVDTLWRLVGHS 869
            WF+PFAY+I++  + SLAEFL  GGT LG+WNDQRIWL+KRT+SY FA +DT+ RL+G S
Sbjct: 552  WFLPFAYVILAKYSGSLAEFLWSGGTLLGWWNDQRIWLFKRTTSYLFAFMDTILRLLGFS 611

Query: 870  NTTFTITSKVSDQDAYRRYEQNIMDFETPSPMITIXXXXXXXXXXXXXXXVMQVVMDFSR 1049
             T+F +T+KV+D+D  +RYE  +M+F   SPM TI               V +V +D   
Sbjct: 612  ETSFILTAKVADEDVSQRYEGEMMEFGGSSPMFTILATLAMLNLFCVVGVVKKVGLDM-E 670

Query: 1050 TFETMVIQIILCLFLVLINLPIYEALFLRKD 1142
             ++TM +QI+L + L+LIN P+Y+ LFLRKD
Sbjct: 671  VYKTMALQILLAVVLLLINGPLYQGLFLRKD 701



 Score =  168 bits (426), Expect = 2e-39
 Identities = 77/122 (63%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   HDIYANSLKVICEVDFHGLDGWGGPLYIGTGCFHRRDTLCGRVFNNNQTRSEYWNKGNDQ 181
           +++Y++SL+VI EV+FHGLDG+GGP+YIGTGCFHRRDTLCGR F+      +Y N+   +
Sbjct: 345 NELYSSSLRVISEVEFHGLDGYGGPMYIGTGCFHRRDTLCGRKFSK-----DYRNEWKRE 399

Query: 182 EIY-KETSYELEERLKDLASCTFEKDTLWGNEVGLKYGCPVEDIITGISILCNGWKSVYY 358
            I  +E+++EL+E LK+LASC +E DT WGNE+GLKYGCPVED+ITG+SI C GWKSVY 
Sbjct: 400 SIKTEESAHELQESLKNLASCRYEGDTQWGNEMGLKYGCPVEDVITGLSIQCLGWKSVYL 459

Query: 359 NP 364
           NP
Sbjct: 460 NP 461


>emb|CBI39755.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  227 bits (579), Expect = 4e-57
 Identities = 115/211 (54%), Positives = 147/211 (69%)
 Frame = +3

Query: 510  MLSKYSPARYGFGRMKTGHIMGYSVYLLWAPCSLPTLYYCIVPSLSLLTGISLFPQKSSM 689
            +LSKYSPA YG GR+  G I+GY  Y LW   SL TL YCIVPSL LL GI LFPQ SS 
Sbjct: 470  LLSKYSPAWYGLGRISPGLILGYCTYCLWPLNSLATLSYCIVPSLYLLHGIPLFPQVSSP 529

Query: 690  WFIPFAYIIISTCAYSLAEFLQCGGTFLGFWNDQRIWLYKRTSSYFFAIVDTLWRLVGHS 869
            WF+PFAY+I++  + SLAEFL  GGT LG+WNDQRIWL+KRT+SY FA +DT+ RL+G S
Sbjct: 530  WFLPFAYVILAKYSGSLAEFLWSGGTLLGWWNDQRIWLFKRTTSYLFAFMDTILRLLGFS 589

Query: 870  NTTFTITSKVSDQDAYRRYEQNIMDFETPSPMITIXXXXXXXXXXXXXXXVMQVVMDFSR 1049
             T+F +T+KV+D+D  +RYE  +M+F   SPM TI               V +V +D   
Sbjct: 590  ETSFILTAKVADEDVSQRYEGEMMEFGGSSPMFTILATLAMLNLFCVVGVVKKVGLDM-E 648

Query: 1050 TFETMVIQIILCLFLVLINLPIYEALFLRKD 1142
             ++TM +QI+L + L+LIN P+Y+ LFLRKD
Sbjct: 649  VYKTMALQILLAVVLLLINGPLYQGLFLRKD 679



 Score =  168 bits (426), Expect = 2e-39
 Identities = 77/122 (63%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   HDIYANSLKVICEVDFHGLDGWGGPLYIGTGCFHRRDTLCGRVFNNNQTRSEYWNKGNDQ 181
           +++Y++SL+VI EV+FHGLDG+GGP+YIGTGCFHRRDTLCGR F+      +Y N+   +
Sbjct: 323 NELYSSSLRVISEVEFHGLDGYGGPMYIGTGCFHRRDTLCGRKFSK-----DYRNEWKRE 377

Query: 182 EIY-KETSYELEERLKDLASCTFEKDTLWGNEVGLKYGCPVEDIITGISILCNGWKSVYY 358
            I  +E+++EL+E LK+LASC +E DT WGNE+GLKYGCPVED+ITG+SI C GWKSVY 
Sbjct: 378 SIKTEESAHELQESLKNLASCRYEGDTQWGNEMGLKYGCPVEDVITGLSIQCLGWKSVYL 437

Query: 359 NP 364
           NP
Sbjct: 438 NP 439