BLASTX nr result

ID: Bupleurum21_contig00011898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011898
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40788.3| unnamed protein product [Vitis vinifera]              304   1e-80
ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like pr...   304   1e-80
ref|XP_002301891.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
ref|XP_002510746.1| Squamosa promoter-binding protein, putative ...   288   6e-76
ref|XP_004172805.1| PREDICTED: LOW QUALITY PROTEIN: squamosa pro...   279   5e-73

>emb|CBI40788.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  304 bits (779), Expect = 1e-80
 Identities = 148/224 (66%), Positives = 173/224 (77%), Gaps = 1/224 (0%)
 Frame = -1

Query: 669  DAQNRSGRIFFKLIDKDPSQLPGALRTQIFNWLGQSPSEMESYIRPGCVVLSIYISMPSS 490
            DAQ+R+GRI FKL DKDPS  PG LRT+I+NWL  SPSEMESYIRPGCVVLS+Y SM S+
Sbjct: 406  DAQDRTGRIIFKLFDKDPSHFPGTLRTEIYNWLAHSPSEMESYIRPGCVVLSVYASMSSA 465

Query: 489  AWEQLEDNLLQNITALVQDSDV-FWRKGRFLVNTGRQLASYLDGKVHLRKSLRAWTFPEV 313
            AWEQLE+NLL  + +LVQDSD  FWR GRFLV+TGR+LAS+ DGK+ L KS R W  PE+
Sbjct: 466  AWEQLEENLLHRVNSLVQDSDSDFWRNGRFLVHTGRELASHKDGKIRLCKSWRTWNSPEL 525

Query: 312  VSVSPLAVVGGQETTILLKGRNLSAQDTKVFCTHAVGYKLKGISKLISEDATYDEITLSD 133
            +SVSPLAVVGGQET+ LLKGRNL+   TK+ CT+  GY  K +  L  +   YDEI+   
Sbjct: 526  ISVSPLAVVGGQETSFLLKGRNLANPGTKIHCTYMGGYTSKEVPGLARQGTVYDEISFGS 585

Query: 132  FTITGGAPDVLGRCFIEVENGFRATSFPIIIANATICNELRLLE 1
            F I    P VLGRCFIEVENGFR  SFP+I+A+ATIC ELRLLE
Sbjct: 586  FKINDAIPSVLGRCFIEVENGFRGNSFPVIVADATICKELRLLE 629


>ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis
            vinifera]
          Length = 1070

 Score =  304 bits (779), Expect = 1e-80
 Identities = 148/224 (66%), Positives = 173/224 (77%), Gaps = 1/224 (0%)
 Frame = -1

Query: 669  DAQNRSGRIFFKLIDKDPSQLPGALRTQIFNWLGQSPSEMESYIRPGCVVLSIYISMPSS 490
            DAQ+R+GRI FKL DKDPS  PG LRT+I+NWL  SPSEMESYIRPGCVVLS+Y SM S+
Sbjct: 539  DAQDRTGRIIFKLFDKDPSHFPGTLRTEIYNWLAHSPSEMESYIRPGCVVLSVYASMSSA 598

Query: 489  AWEQLEDNLLQNITALVQDSDV-FWRKGRFLVNTGRQLASYLDGKVHLRKSLRAWTFPEV 313
            AWEQLE+NLL  + +LVQDSD  FWR GRFLV+TGR+LAS+ DGK+ L KS R W  PE+
Sbjct: 599  AWEQLEENLLHRVNSLVQDSDSDFWRNGRFLVHTGRELASHKDGKIRLCKSWRTWNSPEL 658

Query: 312  VSVSPLAVVGGQETTILLKGRNLSAQDTKVFCTHAVGYKLKGISKLISEDATYDEITLSD 133
            +SVSPLAVVGGQET+ LLKGRNL+   TK+ CT+  GY  K +  L  +   YDEI+   
Sbjct: 659  ISVSPLAVVGGQETSFLLKGRNLANPGTKIHCTYMGGYTSKEVPGLARQGTVYDEISFGS 718

Query: 132  FTITGGAPDVLGRCFIEVENGFRATSFPIIIANATICNELRLLE 1
            F I    P VLGRCFIEVENGFR  SFP+I+A+ATIC ELRLLE
Sbjct: 719  FKINDAIPSVLGRCFIEVENGFRGNSFPVIVADATICKELRLLE 762


>ref|XP_002301891.1| predicted protein [Populus trichocarpa] gi|222843617|gb|EEE81164.1|
            predicted protein [Populus trichocarpa]
          Length = 1044

 Score =  298 bits (762), Expect = 1e-78
 Identities = 144/224 (64%), Positives = 176/224 (78%), Gaps = 1/224 (0%)
 Frame = -1

Query: 669  DAQNRSGRIFFKLIDKDPSQLPGALRTQIFNWLGQSPSEMESYIRPGCVVLSIYISMPSS 490
            D Q+R+GRI FKL DKDPS  PG LRT+I+NWL  SPSEMESYIRPGCVVLS+Y+SMPS+
Sbjct: 507  DPQDRTGRIIFKLFDKDPSHFPGTLRTKIYNWLSNSPSEMESYIRPGCVVLSVYLSMPSA 566

Query: 489  AWEQLEDNLLQNITALVQDSDV-FWRKGRFLVNTGRQLASYLDGKVHLRKSLRAWTFPEV 313
            +WEQLE NLLQ + +LVQDSD   WR GRFL+NTGRQLAS+ DGKV L KS R W+ PE+
Sbjct: 567  SWEQLERNLLQLVDSLVQDSDSDLWRSGRFLLNTGRQLASHKDGKVRLCKSWRTWSSPEL 626

Query: 312  VSVSPLAVVGGQETTILLKGRNLSAQDTKVFCTHAVGYKLKGISKLISEDATYDEITLSD 133
            + VSP+AV+GGQET++ LKGRNL+   TK+ CT+  GY  K ++   S  + YDEI +  
Sbjct: 627  ILVSPVAVIGGQETSLQLKGRNLTGPGTKIHCTYMGGYTSKEVTDSSSPGSMYDEINVGG 686

Query: 132  FTITGGAPDVLGRCFIEVENGFRATSFPIIIANATICNELRLLE 1
            F I G +P +LGRCFIEVENGF+  SFP+IIA+A+IC ELRLLE
Sbjct: 687  FKIHGPSPSILGRCFIEVENGFKGNSFPVIIADASICKELRLLE 730


>ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis]
            gi|223551447|gb|EEF52933.1| Squamosa promoter-binding
            protein, putative [Ricinus communis]
          Length = 1073

 Score =  288 bits (738), Expect = 6e-76
 Identities = 141/224 (62%), Positives = 172/224 (76%), Gaps = 1/224 (0%)
 Frame = -1

Query: 669  DAQNRSGRIFFKLIDKDPSQLPGALRTQIFNWLGQSPSEMESYIRPGCVVLSIYISMPSS 490
            DAQ+R+GRI FKL DKDPS  PG LRTQI+NWL  SPSEMESYIRPGCVVLS+Y+SM S+
Sbjct: 539  DAQDRTGRIIFKLFDKDPSHFPGKLRTQIYNWLSNSPSEMESYIRPGCVVLSVYLSMSSA 598

Query: 489  AWEQLEDNLLQNITALVQDS-DVFWRKGRFLVNTGRQLASYLDGKVHLRKSLRAWTFPEV 313
             WE+LE NLLQ + +LVQDS   FWR GRFL++TGRQLAS+ DG + L KS R W+ PE+
Sbjct: 599  KWERLERNLLQQVDSLVQDSYSDFWRTGRFLLHTGRQLASHKDGNIRLCKSWRTWSSPEL 658

Query: 312  VSVSPLAVVGGQETTILLKGRNLSAQDTKVFCTHAVGYKLKGISKLISEDATYDEITLSD 133
            +SVSP+AVVGGQET++LL+GRNL+   TK+ CT+  GY    + +     A YDEI +S 
Sbjct: 659  ISVSPVAVVGGQETSLLLRGRNLTNAGTKIHCTYMGGYTSMEVMESTLPGAIYDEINMSG 718

Query: 132  FTITGGAPDVLGRCFIEVENGFRATSFPIIIANATICNELRLLE 1
            F + G  P  LGR FIEVENGF+  SFP+I+A+ATIC ELRLLE
Sbjct: 719  FKVHGSPPSSLGRLFIEVENGFKGNSFPVIVADATICKELRLLE 762


>ref|XP_004172805.1| PREDICTED: LOW QUALITY PROTEIN: squamosa promoter-binding-like
            protein 14-like [Cucumis sativus]
          Length = 1031

 Score =  279 bits (713), Expect = 5e-73
 Identities = 140/228 (61%), Positives = 173/228 (75%), Gaps = 5/228 (2%)
 Frame = -1

Query: 669  DAQNRSGRIFFKLIDKDPSQLPGALRTQIFNWLGQSPSEMESYIRPGCVVLSIYISMPSS 490
            DAQ+R+GRI FKL +KDPSQ PG LRTQI+NWL   PSEMESYIRPGCVVLS+Y+SM S 
Sbjct: 493  DAQDRTGRISFKLFEKDPSQFPGTLRTQIYNWLSNCPSEMESYIRPGCVVLSVYMSMSSI 552

Query: 489  AWEQLEDNLLQNITALVQDSDV-FWRKGRFLVNTGRQLASYLDGKVHLRKSLRAWTFPEV 313
            AWE+LE+NL+ ++ +LV   ++ FWR GRFLV TGRQLAS+ DGK+HL KS +AW+ PE+
Sbjct: 553  AWERLEENLVLHLKSLVHSEELDFWRSGRFLVYTGRQLASHKDGKIHLNKSSKAWSNPEL 612

Query: 312  VSVSPLAVVGGQETTILLKGRNLSAQDTKVFCTHAVGY---KLKGISKL-ISEDATYDEI 145
             SVSPLAVV GQ+T+ LL+GRNL    T++ CT   GY   ++ G+S L +S +  YDEI
Sbjct: 613  TSVSPLAVVSGQKTSFLLRGRNLKIPGTRIHCTSMGGYISEEVMGLSSLGLSSEGIYDEI 672

Query: 144  TLSDFTITGGAPDVLGRCFIEVENGFRATSFPIIIANATICNELRLLE 1
                F +   +P  LGRCFIEVENGFR  SFP+IIA+ATIC ELR LE
Sbjct: 673  HSRSFKVGDVSPTTLGRCFIEVENGFRGNSFPVIIADATICRELRHLE 720


Top