BLASTX nr result

ID: Bupleurum21_contig00011879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011879
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]              328   1e-87
ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cy...   314   2e-83
ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycin...   313   4e-83
ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy...   310   3e-82

>emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
          Length = 201

 Score =  328 bits (841), Expect = 1e-87
 Identities = 161/186 (86%), Positives = 175/186 (94%)
 Frame = +2

Query: 2   RTVYVSEIDHNVTEERLAGLFSGFGQVVDCRICGDPHSRLRFAFVEFADEYSARAALNLA 181
           RTVYV+EID+NVTEE+LA LFS +GQVVDCRICGDPHSRLRFAFVEFADEYSARAAL+L 
Sbjct: 16  RTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFVEFADEYSARAALSLC 75

Query: 182 GTVLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYCTNIDKKVSQADVKIFFEE 361
           GT+LGFSP+KVLPSKTAILPVNPTFLP+SEDEREMCARTVYCTNIDKKV+QADVK FFE 
Sbjct: 76  GTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVTQADVKNFFET 135

Query: 362 RCGEVSRLRLLGDQVHSTRIAFVEFVMAESAIVALNCCGQVLGSQPVRVSPSKTPVRPRS 541
           RCGEVSRLRLLGD VHSTRIAFVEFVMAESAI+AL+CCG++LGSQ +RVSPSKTPVRPR 
Sbjct: 136 RCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALDCCGEILGSQRIRVSPSKTPVRPRL 195

Query: 542 TRPGMQ 559
            R  MQ
Sbjct: 196 PRAMMQ 201


>ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|222846171|gb|EEE83718.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  318 bits (816), Expect = 1e-84
 Identities = 158/185 (85%), Positives = 167/185 (90%)
 Frame = +2

Query: 2   RTVYVSEIDHNVTEERLAGLFSGFGQVVDCRICGDPHSRLRFAFVEFADEYSARAALNLA 181
           RTVYVS+ID +VTEERLAGLFSG GQVVDCR+CGDPHS LRFAFVEFADE  ARAALNL 
Sbjct: 122 RTVYVSDIDQHVTEERLAGLFSGCGQVVDCRVCGDPHSVLRFAFVEFADEQGARAALNLG 181

Query: 182 GTVLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYCTNIDKKVSQADVKIFFEE 361
           GT+LG+ PV+VLPSKTAILPVNPTFLP+SEDEREMC RTVYCTNIDKKVSQ +VK FFE 
Sbjct: 182 GTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTVYCTNIDKKVSQVEVKNFFES 241

Query: 362 RCGEVSRLRLLGDQVHSTRIAFVEFVMAESAIVALNCCGQVLGSQPVRVSPSKTPVRPRS 541
            CGEV+RLRLLGDQVHSTRIAFVEF MAESAIVALNC G  LGSQPVRVSPSKTPVRPR 
Sbjct: 242 ICGEVTRLRLLGDQVHSTRIAFVEFAMAESAIVALNCSGMALGSQPVRVSPSKTPVRPRV 301

Query: 542 TRPGM 556
           TRP M
Sbjct: 302 TRPAM 306


>ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 296

 Score =  314 bits (805), Expect = 2e-83
 Identities = 154/183 (84%), Positives = 165/183 (90%)
 Frame = +2

Query: 2   RTVYVSEIDHNVTEERLAGLFSGFGQVVDCRICGDPHSRLRFAFVEFADEYSARAALNLA 181
           RTVYVSEID +VTEERLA LFS  GQV+DCRICGDPHS LRFAFVEFADEY AR ALNL 
Sbjct: 111 RTVYVSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLG 170

Query: 182 GTVLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYCTNIDKKVSQADVKIFFEE 361
           GTVLG+ PV+VLPSKTAILPVNPTFLP+S+DEREMCARTVYCTNIDKKVSQA+VK FFE 
Sbjct: 171 GTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTVYCTNIDKKVSQAEVKNFFES 230

Query: 362 RCGEVSRLRLLGDQVHSTRIAFVEFVMAESAIVALNCCGQVLGSQPVRVSPSKTPVRPRS 541
            CGEV RLRLLGD VHSTRIAFVEF MAESAI+ALNC G +LG+QP+RVSPSKTPVRPR 
Sbjct: 231 ACGEVMRLRLLGDHVHSTRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRV 290

Query: 542 TRP 550
           TRP
Sbjct: 291 TRP 293


>ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
           gi|255639113|gb|ACU19856.1| unknown [Glycine max]
          Length = 296

 Score =  313 bits (803), Expect = 4e-83
 Identities = 153/183 (83%), Positives = 165/183 (90%)
 Frame = +2

Query: 2   RTVYVSEIDHNVTEERLAGLFSGFGQVVDCRICGDPHSRLRFAFVEFADEYSARAALNLA 181
           RTVYVSEID +VTEERLA LFS  GQV+DCRICGDPHS LRFAFVEFADEY AR ALNL 
Sbjct: 111 RTVYVSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLG 170

Query: 182 GTVLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYCTNIDKKVSQADVKIFFEE 361
           GTVLG+ PV+VLPSKTAILPVNPTFLP+S+DEREMCART+YCTNIDKKVSQA+VK FFE 
Sbjct: 171 GTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQAEVKNFFES 230

Query: 362 RCGEVSRLRLLGDQVHSTRIAFVEFVMAESAIVALNCCGQVLGSQPVRVSPSKTPVRPRS 541
            CGEV RLRLLGDQVHSTRIAFVEF MAESAI+ALNC G +LG+QP+RVSPSKTPVRPR 
Sbjct: 231 ACGEVMRLRLLGDQVHSTRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRV 290

Query: 542 TRP 550
            RP
Sbjct: 291 PRP 293


>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
           [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
           protein product [Vitis vinifera]
          Length = 292

 Score =  310 bits (795), Expect = 3e-82
 Identities = 154/182 (84%), Positives = 165/182 (90%)
 Frame = +2

Query: 2   RTVYVSEIDHNVTEERLAGLFSGFGQVVDCRICGDPHSRLRFAFVEFADEYSARAALNLA 181
           RTVYVS+ID +VTEERLA LFS  GQVVDCR+CGDPHS LRFAFVEFADE+ ARAALNL 
Sbjct: 107 RTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNLG 166

Query: 182 GTVLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYCTNIDKKVSQADVKIFFEE 361
           GT+LG+ PV+VLPSKTAILPVNPTFLP+SEDEREMCARTVYCTNIDKKVSQA+VK FFE 
Sbjct: 167 GTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVSQAEVKNFFER 226

Query: 362 RCGEVSRLRLLGDQVHSTRIAFVEFVMAESAIVALNCCGQVLGSQPVRVSPSKTPVRPRS 541
            CGEVSRLRLLGD VHSTRIAFVEF MAESAIVALNC G VLG+QP+RVSPSKTPVRPR 
Sbjct: 227 ACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGLVLGTQPIRVSPSKTPVRPRV 286

Query: 542 TR 547
            R
Sbjct: 287 PR 288


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