BLASTX nr result

ID: Bupleurum21_contig00011852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011852
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606513.1| CCR4-NOT transcription complex subunit [Medi...   127   3e-36
ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267...   127   2e-35
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...   128   2e-35
emb|CBI16241.3| unnamed protein product [Vitis vinifera]              127   2e-35
emb|CAN64164.1| hypothetical protein VITISV_018167 [Vitis vinifera]   127   2e-35

>ref|XP_003606513.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|355507568|gb|AES88710.1| CCR4-NOT transcription
           complex subunit [Medicago truncatula]
          Length = 1223

 Score =  127 bits (318), Expect(2) = 3e-36
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   MSDQGEKTCPLCAEEMDLTDQQLKPCKCGYDICVWCWHHIMDMAEKDGTSGRCPACR 171
           MSD+GE+TCPLCAEEMDLTDQQLKPC+CGY+ICVWCWHHIMDMAEKD T GRCPACR
Sbjct: 9   MSDEGERTCPLCAEEMDLTDQQLKPCRCGYEICVWCWHHIMDMAEKDDTDGRCPACR 65



 Score = 50.1 bits (118), Expect(2) = 3e-36
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = +2

Query: 230 GRCPACRTLYNKEKIVGTSAKFERAVAEMGME 325
           GRCPACR+ Y+KEKIVGT+AK ER + EM +E
Sbjct: 59  GRCPACRSPYDKEKIVGTAAKCERLLNEMNLE 90


>ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267264 [Vitis vinifera]
          Length = 1024

 Score =  127 bits (318), Expect(2) = 2e-35
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   MSDQGEKTCPLCAEEMDLTDQQLKPCKCGYDICVWCWHHIMDMAEKDGTSGRCPACR 171
           MSD+GEKTCPLCAEEMDLTDQQLKPCKCGY+ICVWCWHHIM+MAEKD T GRCPACR
Sbjct: 1   MSDEGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMNMAEKDETEGRCPACR 57



 Score = 47.4 bits (111), Expect(2) = 2e-35
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = +2

Query: 230 GRCPACRTLYNKEKIVGTSAKFERAVAEMGME 325
           GRCPACR  YNKEKIVG +A  +R VAE+ +E
Sbjct: 51  GRCPACRVPYNKEKIVGMAADCKRLVAEINLE 82


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score =  128 bits (321), Expect(2) = 2e-35
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   MSDQGEKTCPLCAEEMDLTDQQLKPCKCGYDICVWCWHHIMDMAEKDGTSGRCPACR 171
           MSD+GE+TCPLCAEEMDLTDQQLKPCKCGY+ICVWCWHHIMDMAEKD T GRCPACR
Sbjct: 1   MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACR 57



 Score = 46.2 bits (108), Expect(2) = 2e-35
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = +2

Query: 230 GRCPACRTLYNKEKIVGTSAKFERAVAEMGME 325
           GRCPACR+ Y+KEKIVGT+A  ER V  + ME
Sbjct: 51  GRCPACRSPYDKEKIVGTAANCERLVNGINME 82


>emb|CBI16241.3| unnamed protein product [Vitis vinifera]
          Length = 1022

 Score =  127 bits (318), Expect(2) = 2e-35
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   MSDQGEKTCPLCAEEMDLTDQQLKPCKCGYDICVWCWHHIMDMAEKDGTSGRCPACR 171
           MSD+GEKTCPLCAEEMDLTDQQLKPCKCGY+ICVWCWHHIM+MAEKD T GRCPACR
Sbjct: 1   MSDEGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMNMAEKDETEGRCPACR 57



 Score = 47.4 bits (111), Expect(2) = 2e-35
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = +2

Query: 230 GRCPACRTLYNKEKIVGTSAKFERAVAEMGME 325
           GRCPACR  YNKEKIVG +A  +R VAE+ +E
Sbjct: 51  GRCPACRVPYNKEKIVGMAADCKRLVAEINLE 82


>emb|CAN64164.1| hypothetical protein VITISV_018167 [Vitis vinifera]
          Length = 245

 Score =  127 bits (318), Expect(2) = 2e-35
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   MSDQGEKTCPLCAEEMDLTDQQLKPCKCGYDICVWCWHHIMDMAEKDGTSGRCPACR 171
           MSD+GEKTCPLCAEEMDLTDQQLKPCKCGY+ICVWCWHHIM+MAEKD T GRCPACR
Sbjct: 1   MSDEGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMNMAEKDETEGRCPACR 57



 Score = 47.4 bits (111), Expect(2) = 2e-35
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = +2

Query: 230 GRCPACRTLYNKEKIVGTSAKFERAVAEMGME 325
           GRCPACR  YNKEKIVG +A  +R VAE+ +E
Sbjct: 51  GRCPACRVPYNKEKIVGMAADCKRLVAEINLE 82


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