BLASTX nr result

ID: Bupleurum21_contig00011839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011839
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   239   6e-61
ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   238   1e-60
gb|AFK42399.1| unknown [Lotus japonicus]                              234   2e-59
ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59
ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   232   8e-59

>ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449474267|ref|XP_004154123.1|
           PREDICTED: thylakoid lumenal 17.9 kDa protein,
           chloroplastic-like [Cucumis sativus]
           gi|449503674|ref|XP_004162120.1| PREDICTED: thylakoid
           lumenal 17.9 kDa protein, chloroplastic-like [Cucumis
           sativus]
          Length = 232

 Score =  239 bits (610), Expect = 6e-61
 Identities = 122/199 (61%), Positives = 148/199 (74%)
 Frame = +1

Query: 31  ASLLSPNTKPIVWSNIISIALAVSTFTSPLQSLAIXXXXXXXXXXXXXXXXXQSKNLPTG 210
           ++L + N KPI  S+++S AL++ T +SP  S+AI                 QSKNLPTG
Sbjct: 35  STLQNANHKPIFLSHLLSFALSI-TLSSPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTG 93

Query: 211 LENGTIRACPPTNPSCISTNPKSSSSAFPWLISQKALEDNPTQQLFEAILETQKDVKIET 390
           LENG I  CP  NPSC+STNPKSSS AFP  I       NP Q+L EAILETQ++ KI+ 
Sbjct: 94  LENGKIMPCPSANPSCVSTNPKSSSFAFPLNIPDN-FSGNPIQKLQEAILETQRNPKIQV 152

Query: 391 VENTPYGQYLQAEVDGGFGRDVLEFLVKGDVVAYRAMATKVTYLYPFTTALGDSKGQEER 570
           VE+TPYGQYL+AEVDG FGRDV+EFLV+GDV AYR MATKVTY+YPFTTALGDSKGQEER
Sbjct: 153 VEDTPYGQYLEAEVDGNFGRDVIEFLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEER 212

Query: 571 LKKIVDQLGWYAPTLESME 627
           ++KI+DQL WY+PT +SM+
Sbjct: 213 MRKIIDQLHWYSPTFDSMD 231


>ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Vitis
           vinifera] gi|297734440|emb|CBI15687.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  238 bits (608), Expect = 1e-60
 Identities = 122/193 (63%), Positives = 145/193 (75%)
 Frame = +1

Query: 49  NTKPIVWSNIISIALAVSTFTSPLQSLAIXXXXXXXXXXXXXXXXXQSKNLPTGLENGTI 228
           NT+P +  N++S AL VS  +SPL SLA+                 QSKNL  GLENG I
Sbjct: 36  NTRPFLLPNLLSFALTVSLASSPL-SLALPSINSQSSLLPPTTPFSQSKNLQVGLENGKI 94

Query: 229 RACPPTNPSCISTNPKSSSSAFPWLISQKALEDNPTQQLFEAILETQKDVKIETVENTPY 408
           R CP  NP C+STNPKSSS AFP  I +K   DN  Q+L E IL+TQ++ KI+ VE+TP 
Sbjct: 95  RPCPSINPGCVSTNPKSSSFAFPLTIPEK-YSDNAVQKLQETILKTQRNAKIQVVEDTPD 153

Query: 409 GQYLQAEVDGGFGRDVLEFLVKGDVVAYRAMATKVTYLYPFTTALGDSKGQEERLKKIVD 588
           GQYL+AEVDGGFGRD++EFLVKGDVVAYR MATKVTY+YPFTTALGDSKGQEER+KKI+D
Sbjct: 154 GQYLRAEVDGGFGRDIMEFLVKGDVVAYRTMATKVTYVYPFTTALGDSKGQEERMKKIID 213

Query: 589 QLGWYAPTLESME 627
            LGWYAP+L+SM+
Sbjct: 214 LLGWYAPSLDSMD 226


>gb|AFK42399.1| unknown [Lotus japonicus]
          Length = 214

 Score =  234 bits (597), Expect = 2e-59
 Identities = 123/185 (66%), Positives = 140/185 (75%)
 Frame = +1

Query: 73  NIISIALAVSTFTSPLQSLAIXXXXXXXXXXXXXXXXXQSKNLPTGLENGTIRACPPTNP 252
           N++S+ALAV T TSPL S AI                 Q+KNL  GLENG IR CP  NP
Sbjct: 32  NLLSLALAV-TLTSPLPSSAIPSLNSQPPSTSLTTPFSQAKNLKVGLENGKIRTCPSINP 90

Query: 253 SCISTNPKSSSSAFPWLISQKALEDNPTQQLFEAILETQKDVKIETVENTPYGQYLQAEV 432
            CIS+NPKSSS AFPWLI + +L DNP Q+L EAIL+TQK+VK   VE+TP GQY+QAEV
Sbjct: 91  GCISSNPKSSSFAFPWLIPENSL-DNPIQKLREAILKTQKNVKFLLVEDTPDGQYMQAEV 149

Query: 433 DGGFGRDVLEFLVKGDVVAYRAMATKVTYLYPFTTALGDSKGQEERLKKIVDQLGWYAPT 612
           D GF RDVLEFLVKG+VVAYR MATKVTY+YPFTTA GDSKGQE RLK+I DQLGWYAP+
Sbjct: 150 DAGFDRDVLEFLVKGEVVAYRCMATKVTYVYPFTTAFGDSKGQEARLKQINDQLGWYAPS 209

Query: 613 LESME 627
            +SME
Sbjct: 210 FDSME 214


>ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|222869262|gb|EEF06393.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  233 bits (595), Expect = 3e-59
 Identities = 122/208 (58%), Positives = 151/208 (72%), Gaps = 6/208 (2%)
 Frame = +1

Query: 22  HISASLLSPNT------KPIVWSNIISIALAVSTFTSPLQSLAIXXXXXXXXXXXXXXXX 183
           H+S S ++  T      KPI+++N+ S+AL V T  SPL SLAI                
Sbjct: 11  HLSTSKITNFTSQNVTLKPILFTNLFSLALTV-TLNSPLPSLAIPSLNSQPPLLSPTTPF 69

Query: 184 XQSKNLPTGLENGTIRACPPTNPSCISTNPKSSSSAFPWLISQKALEDNPTQQLFEAILE 363
            QSKNL  GLENG IR CP TNP C+STNP+SSS +FPW I +   E N  Q+L EAIL+
Sbjct: 70  SQSKNLQIGLENGKIRPCPSTNPGCVSTNPQSSSFSFPWRIPENDTE-NAIQKLEEAILK 128

Query: 364 TQKDVKIETVENTPYGQYLQAEVDGGFGRDVLEFLVKGDVVAYRAMATKVTYLYPFTTAL 543
           TQ++ KI+ +E+TP G+YLQAEVDGGF  DVLEFLV+GDVVAYR MATKVTY+YPFTTA 
Sbjct: 129 TQRNAKIQVIEDTPNGKYLQAEVDGGFDPDVLEFLVRGDVVAYRTMATKVTYVYPFTTAF 188

Query: 544 GDSKGQEERLKKIVDQLGWYAPTLESME 627
           GDSKGQEER+KKI+++LGWYAP+ +SM+
Sbjct: 189 GDSKGQEERMKKILNELGWYAPSFDSMD 216


>ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 223

 Score =  232 bits (592), Expect = 8e-59
 Identities = 126/207 (60%), Positives = 145/207 (70%)
 Frame = +1

Query: 7   KTTSTHISASLLSPNTKPIVWSNIISIALAVSTFTSPLQSLAIXXXXXXXXXXXXXXXXX 186
           K  +TH    +L     P    N++S+ALAV T  SPL S AI                 
Sbjct: 22  KLKTTHTPNLVLGQRVLP----NLLSLALAV-TLASPLPSHAIPSLNSQPPPISLTTPFS 76

Query: 187 QSKNLPTGLENGTIRACPPTNPSCISTNPKSSSSAFPWLISQKALEDNPTQQLFEAILET 366
           QSKNL  GLENG IR CP  NP CISTNPKSSS +FPWLI   +  D+  Q+L EAIL+T
Sbjct: 77  QSKNLELGLENGKIRPCPSINPGCISTNPKSSSFSFPWLIPSNS-SDDAIQKLREAILKT 135

Query: 367 QKDVKIETVENTPYGQYLQAEVDGGFGRDVLEFLVKGDVVAYRAMATKVTYLYPFTTALG 546
           QK+VK + VE+TP GQYLQAEVDGGFGRD+LEFLVKGDVVAYR +A KVTY+YPFTTA G
Sbjct: 136 QKNVKFQPVEDTPDGQYLQAEVDGGFGRDILEFLVKGDVVAYRCVAMKVTYVYPFTTAFG 195

Query: 547 DSKGQEERLKKIVDQLGWYAPTLESME 627
           DSKGQE RLK+I DQLGWYAP+ +SME
Sbjct: 196 DSKGQEARLKQINDQLGWYAPSFDSME 222


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