BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011818
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16128.3| unnamed protein product [Vitis vinifera]              222   2e-56
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]   222   2e-56
ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|NP_192906.1| pentatricopeptide repeat-containing protein [Ar...   201   4e-50
ref|XP_002872617.1| pentatricopeptide repeat-containing protein ...   197   6e-49

>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  222 bits (566), Expect = 2e-56
 Identities = 109/163 (66%), Positives = 133/163 (81%)
 Frame = -3

Query: 491 CNVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLF 312
           CNVVTYN L+GGL  E RV+E ERL+ +M+RDGLSPN+I+YNTLIDG+C+I   DKAS  
Sbjct: 302 CNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSL 361

Query: 311 LNQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMR 132
            NQMKSSG SPSL TYNILI GFS A N A VT++V+EME RG+ P+KVTYTIL+D  +R
Sbjct: 362 FNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVR 421

Query: 131 ANNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEAS 3
           ++N+EKA +++S MEKAGLVADI  YGVL+HG C  G+MKEAS
Sbjct: 422 SDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/158 (30%), Positives = 82/158 (51%)
 Frame = -3

Query: 479 TYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFLNQM 300
           T+N LL  LLI+S   E    V    +  +  +V ++  +I G C +   DK    L QM
Sbjct: 132 TFNNLLI-LLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM 190

Query: 299 KSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRANNM 120
           +  GLSP++V Y  LIDG  + G+  +  +L  +M E  +   + TYT+LI+ F +    
Sbjct: 191 EEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLK 250

Query: 119 EKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
           +  +E++  M+  G+V ++ TY  ++   C+ G +  A
Sbjct: 251 KDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 288



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/161 (28%), Positives = 78/161 (48%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V ++ I++ G      + +   ++ QM   GLSPNV+ Y TLIDG C     ++     
Sbjct: 163 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 222

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
            +M    +  +  TY +LI+GF + G +    EL ++M+  GI P   TY  +I      
Sbjct: 223 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 282

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
             +  A E+   M + G+  ++ TY  L+ G C +  + EA
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 323



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/161 (26%), Positives = 77/161 (47%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           ++ TYNIL+ G         V  +V +M   GLSP+ +TY  L+D     +  +KA    
Sbjct: 373 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 432

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
           + M+ +GL   +  Y +LI G    G+  + ++L + ++E  + P  V Y  +I  + + 
Sbjct: 433 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 492

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
            +  +AL +   M + G+V ++ +Y   +   C      EA
Sbjct: 493 GSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEA 533



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/146 (25%), Positives = 66/146 (45%)
 Frame = -3

Query: 482 VTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFLNQ 303
           VTY IL+  L+    + +  ++   M + GL  ++  Y  LI G C +    +AS     
Sbjct: 410 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 469

Query: 302 MKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRANN 123
           +    L P+ V YN +I G+ + G+  +   L++EM E G+ P   +Y   I    +   
Sbjct: 470 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEK 529

Query: 122 MEKALEVHSCMEKAGLVADICTYGVL 45
             +A  +   M + GL   I  + ++
Sbjct: 530 WTEAEVLLKDMIELGLKPSISIWNMI 555



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/106 (26%), Positives = 53/106 (50%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           ++  Y +L+ GL +   + E  +L   +    L PN + YNT+I G+C      +A   L
Sbjct: 443 DIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLL 502

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPT 171
            +M  +G+ P++ +YN  I    +     +   L+++M E G+ P+
Sbjct: 503 KEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  222 bits (566), Expect = 2e-56
 Identities = 109/163 (66%), Positives = 133/163 (81%)
 Frame = -3

Query: 491 CNVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLF 312
           CNVVTYN L+GGL  E RV+E ERL+ +M+RDGLSPN+I+YNTLIDG+C+I   DKAS  
Sbjct: 289 CNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSL 348

Query: 311 LNQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMR 132
            NQMKSSG SPSL TYNILI GFS A N A VT++V+EME RG+ P+KVTYTIL+D  +R
Sbjct: 349 FNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVR 408

Query: 131 ANNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEAS 3
           ++N+EKA +++S MEKAGLVADI  YGVL+HG C  G+MKEAS
Sbjct: 409 SDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 451



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/158 (30%), Positives = 82/158 (51%)
 Frame = -3

Query: 479 TYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFLNQM 300
           T+N LL  LLI+S   E    V    +  +  +V ++  +I G C +   DK    L QM
Sbjct: 119 TFNNLLI-LLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM 177

Query: 299 KSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRANNM 120
           +  GLSP++V Y  LIDG  + G+  +  +L  +M E  +   + TYT+LI+ F +    
Sbjct: 178 EEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLK 237

Query: 119 EKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
           +  +E++  M+  G+V ++ TY  ++   C+ G +  A
Sbjct: 238 KDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 275



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/161 (28%), Positives = 78/161 (48%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V ++ I++ G      + +   ++ QM   GLSPNV+ Y TLIDG C     ++     
Sbjct: 150 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 209

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
            +M    +  +  TY +LI+GF + G +    EL ++M+  GI P   TY  +I      
Sbjct: 210 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 269

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
             +  A E+   M + G+  ++ TY  L+ G C +  + EA
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 310



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/161 (26%), Positives = 77/161 (47%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           ++ TYNIL+ G         V  +V +M   GLSP+ +TY  L+D     +  +KA    
Sbjct: 360 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 419

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
           + M+ +GL   +  Y +LI G    G+  + ++L + ++E  + P  V Y  +I  + + 
Sbjct: 420 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 479

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
            +  +AL +   M + G+V ++ +Y   +   C      EA
Sbjct: 480 GSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEA 520



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/146 (25%), Positives = 66/146 (45%)
 Frame = -3

Query: 482 VTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFLNQ 303
           VTY IL+  L+    + +  ++   M + GL  ++  Y  LI G C +    +AS     
Sbjct: 397 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 456

Query: 302 MKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRANN 123
           +    L P+ V YN +I G+ + G+  +   L++EM E G+ P   +Y   I    +   
Sbjct: 457 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEK 516

Query: 122 MEKALEVHSCMEKAGLVADICTYGVL 45
             +A  +   M + GL   I  + ++
Sbjct: 517 WTEAEVLLKDMIELGLKPSISIWNMI 542



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/106 (26%), Positives = 53/106 (50%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           ++  Y +L+ GL +   + E  +L   +    L PN + YNT+I G+C      +A   L
Sbjct: 430 DIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLL 489

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPT 171
            +M  +G+ P++ +YN  I    +     +   L+++M E G+ P+
Sbjct: 490 KEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPS 535


>ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|222844663|gb|EEE82210.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/162 (61%), Positives = 128/162 (79%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           NVVTYN L+GG+  E RV E E+LVDQM++  +SPN+ITYNTLI GFC++   DKAS  L
Sbjct: 301 NVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLL 360

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
           +Q+KS+GLSPSLVTYNILI+G+S+AGN   V +L +EME RGI P+KVT T+LID ++R 
Sbjct: 361 DQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRL 420

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEAS 3
             MEKA +++S MEK GLV D+  YGVL+HG C +GNMKE+S
Sbjct: 421 QEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESS 462



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/161 (29%), Positives = 85/161 (52%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           N++TYN L+GG      + +   L+DQ++ +GLSP+++TYN LI+G+     +   +   
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
            +M+  G+SPS VT  +LID + R     K  ++   ME+ G+ P    Y +LI      
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
            NM+++ ++   M +  +      Y  ++HG+C + N   A
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRA 496



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/161 (30%), Positives = 81/161 (50%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           ++VTYNIL+ G         V  L  +M   G+SP+ +T   LID +  +   +KA    
Sbjct: 371 SLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIY 430

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
           + M+  GL P +  Y +LI G    GN  + ++L + M E  + P+ V Y  +I  + + 
Sbjct: 431 SSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKE 490

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
           +N  +AL +   ME  GLV ++ +Y  ++   C  G  +EA
Sbjct: 491 DNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEA 531



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 35/197 (17%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V ++ I++ G      + +  +L+  ++  GLSPNV+ Y TLIDG C     ++A LF 
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF 220

Query: 308 NQM-----------------------------------KSSGLSPSLVTYNILIDGFSRA 234
           ++M                                   K +GL P+L TYN L++ +   
Sbjct: 221 DKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGE 280

Query: 233 GNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRANNMEKALEVHSCMEKAGLVADICTY 54
           G   +  +L  EM ERG+    VTY  LI    R   + +A ++   M+KA +  ++ TY
Sbjct: 281 GKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITY 340

Query: 53  GVLVHGWCSQGNMKEAS 3
             L+ G+C  GN+ +AS
Sbjct: 341 NTLIGGFCDVGNLDKAS 357



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/157 (26%), Positives = 77/157 (49%)
 Frame = -3

Query: 476 YNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFLNQMK 297
           +N LLG L + S   E   L     ++ +  +V ++  +I G C     DK+   L  ++
Sbjct: 131 FNSLLGSL-VRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189

Query: 296 SSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRANNME 117
             GLSP++V Y  LIDG  + G+  +      +M E G+   + T+T+LI+   +    +
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249

Query: 116 KALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
              ++   M+  GL  ++ TY  L++ +C +G +  A
Sbjct: 250 DGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRA 286



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/106 (26%), Positives = 56/106 (52%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V  Y +L+ GL ++  + E  +L   M    + P+ + YNT+I G+C  +   +A   L
Sbjct: 441 DVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLL 500

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPT 171
            +M++ GL P++ +Y+ +I    + G   +   L+ +M E  + P+
Sbjct: 501 REMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546


>ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g11690 gi|4539460|emb|CAB39940.1| putative protein
           [Arabidopsis thaliana] gi|7267869|emb|CAB78212.1|
           putative protein [Arabidopsis thaliana]
           gi|91806660|gb|ABE66057.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332657639|gb|AEE83039.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  201 bits (512), Expect = 4e-50
 Identities = 94/163 (57%), Positives = 124/163 (76%)
 Frame = -3

Query: 491 CNVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLF 312
           CN+VTYN L+GGL  E ++ E  ++VDQM+ DG++PN+ITYNTLIDGFC + +  KA   
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360

Query: 311 LNQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMR 132
              +KS GLSPSLVTYNIL+ GF R G+ +   ++V+EMEERGI P+KVTYTILID F R
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420

Query: 131 ANNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEAS 3
           ++NMEKA+++   ME+ GLV D+ TY VL+HG+C +G M EAS
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/161 (29%), Positives = 82/161 (50%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           ++VTYNIL+ G   +       ++V +M   G+ P+ +TY  LID F   +  +KA    
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
             M+  GL P + TY++LI GF   G   + + L + M E+   P +V Y  +I  + + 
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
            +  +AL++   ME+  L  ++ +Y  ++   C +   KEA
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/162 (29%), Positives = 83/162 (51%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V ++ IL+ G      + +   L+ ++   G SPNV+ Y TLIDG C     +KA    
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
            +M   GL  +  TY +LI+G  + G + +  E+ ++M+E G+ P   TY  +++   + 
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEAS 3
              + A +V   M + G+  +I TY  L+ G C +  + EA+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/136 (28%), Positives = 68/136 (50%)
 Frame = -3

Query: 482 VTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFLNQ 303
           VTY IL+        + +  +L   M   GL P+V TY+ LI GFC   + ++AS     
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 302 MKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRANN 123
           M      P+ V YN +I G+ + G+  +  +L++EMEE+ + P   +Y  +I+   +   
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528

Query: 122 MEKALEVHSCMEKAGL 75
            ++A  +   M  +G+
Sbjct: 529 SKEAERLVEKMIDSGI 544



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/122 (28%), Positives = 62/122 (50%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V TY++L+ G  I+ ++ E  RL   M      PN + YNT+I G+C      +A   L
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
            +M+   L+P++ +Y  +I+   +     +   LV++M + GI P+    T ++    RA
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS----TSILSLISRA 557

Query: 128 NN 123
            N
Sbjct: 558 KN 559


>ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318454|gb|EFH48876.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 584

 Score =  197 bits (502), Expect = 6e-49
 Identities = 92/163 (56%), Positives = 122/163 (74%)
 Frame = -3

Query: 491 CNVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLF 312
           CN+VTYN L+GGL  E +  E   ++DQM+ DG++PN+ITYNTLIDGFC + +  KA   
Sbjct: 301 CNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSL 360

Query: 311 LNQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMR 132
              +KS GLSPSLVTYNIL+ GF + G+ +   ++V+EMEERGI P+KVTYTILID F R
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFAR 420

Query: 131 ANNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEAS 3
           ++NMEKA+++ S ME+ GL  D+ TY VL+HG+C +G M EAS
Sbjct: 421 SDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEAS 463



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/161 (31%), Positives = 84/161 (52%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           N  TY +L+ GL       +   + ++M+  G+ PN+ TYN +++  C   R   A    
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
           ++M+  G+S ++VTYN LI G  R     +  E++ +M+  GI P  +TY  LID F   
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
             + KAL +   ++  GL   + TY +LV G+C +G+   A
Sbjct: 352 RKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/161 (28%), Positives = 83/161 (51%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           ++VTYNIL+ G   +       ++V +M   G+ P+ +TY  LID F   +  +KA    
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
           + M+  GL+P + TY++LI GF   G   + + L + M E+   P +V Y  ++  + + 
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEA 6
            +  +AL +   ME+  L  ++ +Y  ++   C +   KEA
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/162 (29%), Positives = 82/162 (50%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V ++ I++ G      + +   L+ ++R  G SPNV+ Y TLIDG C     +KA    
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPTKVTYTILIDCFMRA 129
            +M   GL  +  TY +LI G  + G + +  E+ ++M+E G+ P   TY  +++   + 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 128 NNMEKALEVHSCMEKAGLVADICTYGVLVHGWCSQGNMKEAS 3
              + A +V   M + G+  +I TY  L+ G C +    EA+
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/106 (28%), Positives = 54/106 (50%)
 Frame = -3

Query: 488 NVVTYNILLGGLLIESRVVEVERLVDQMRRDGLSPNVITYNTLIDGFCNINRFDKASLFL 309
           +V TY++L+ G  I+ R+ E  RL   M      PN + YNT++ G+C      +A    
Sbjct: 442 DVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLF 501

Query: 308 NQMKSSGLSPSLVTYNILIDGFSRAGNQAKVTELVQEMEERGIPPT 171
            +M+   L P++ +Y  +I+   +     +   LV++M + GI P+
Sbjct: 502 REMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS 547