BLASTX nr result

ID: Bupleurum21_contig00011778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011778
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15784.3| unnamed protein product [Vitis vinifera]              232   8e-59
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   231   1e-58
ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|2...   213   5e-53
ref|XP_002526386.1| conserved hypothetical protein [Ricinus comm...   210   2e-52
ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr...   204   1e-50

>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  232 bits (591), Expect = 8e-59
 Identities = 124/260 (47%), Positives = 170/260 (65%), Gaps = 2/260 (0%)
 Frame = +2

Query: 2    ARLANIDGVNQHLLAKYGDHILKTIRDLSEGLGLSVDGVSNLQVVNNQKICSMSNHSKEL 181
            ARLANIDGVNQH L  YGDH L++I+ LS+ L L +DG +++Q    +K+  + N  ++L
Sbjct: 663  ARLANIDGVNQHFLTTYGDHFLQSIQHLSQALNLPLDGDASMQAAVVRKMQPVPNQQRKL 722

Query: 182  SPAKLQAWKMWQEDGLSFLKIANFPGRSAPIKEQTVVGYILDAARSGFVIDWMRLSEEIG 361
            +PAK +AWKMWQEDGLS  K+ANFP RSAPIK+QTV+ Y+L AA+ GF IDW RL +E+G
Sbjct: 723  TPAKYEAWKMWQEDGLSIEKVANFPSRSAPIKDQTVLEYLLGAAQEGFAIDWTRLCDEVG 782

Query: 362  LRQDVFINIQAAILKVGSKDKLKPIKDELPEEVSYAQISAVLTMQDLGLSKDVLLVNHQT 541
            L +++F +I+AAI KVGS+DKLKP+K E PE +SYA I   LT+QD G+SK+V+   +  
Sbjct: 783  LTREMFSDIEAAITKVGSRDKLKPVKIESPEYISYAHIKVCLTLQDCGMSKEVIPPGNHN 842

Query: 542  GHDADKCSNDMLELPKQSNNSSHVDSEICELKEPVEHPSLIEKSEAFSKTQDFDDQHSLR 721
               AD       ELP +++ +S      C ++ P                   D+  SLR
Sbjct: 843  TLTAD-------ELPSKASEASMDTMHKCLIRGPFTTSIPFTVDLDMHPPGVHDEIFSLR 895

Query: 722  KRQKVD--PQEKLVVVEATE 775
            KRQK+D   +E L++ EATE
Sbjct: 896  KRQKIDEPEEESLIMQEATE 915


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
            vinifera]
          Length = 913

 Score =  231 bits (589), Expect = 1e-58
 Identities = 128/279 (45%), Positives = 178/279 (63%), Gaps = 21/279 (7%)
 Frame = +2

Query: 2    ARLANIDGVNQHLLAKYGDHILKTIRDLSEGLGLSVDGVSNLQVVNNQKICSMSNHSKEL 181
            ARLANIDGVNQH L  YGDH L++I+ LS+ L L +DG +++Q    +K+  + N  ++L
Sbjct: 588  ARLANIDGVNQHFLTTYGDHFLQSIQHLSQALNLPLDGDASMQAAVVRKMQPVPNQQRKL 647

Query: 182  SPAKLQAWKMWQEDGLSFLKIANFPGRSAPIKEQTVVGYILDAARSGFVIDWMRLSEEIG 361
            +PAK +AWKMWQEDGLS  K+ANFP RSAPIK+QTV+ Y+L AA+ GF IDW RL +E+G
Sbjct: 648  TPAKYEAWKMWQEDGLSIEKVANFPSRSAPIKDQTVLEYLLGAAQEGFAIDWTRLCDEVG 707

Query: 362  LRQDVFINIQAAILKVGSKDKLKPIKDELPEEVSYAQISAVLTMQDLGLSKDVLLVNHQT 541
            L +++F +I+AAI KVGS+DKLKP+K E PE +SYA I   LT+QD G+SK+V+   +  
Sbjct: 708  LTREMFSDIEAAITKVGSRDKLKPVKIESPEYISYAHIKVCLTLQDCGMSKEVIPPGNHN 767

Query: 542  GHDADKCSNDMLELPKQSNNSSHVDSEICELKEPVEHPSLIEK-------------SEAF 682
               AD       ELP +++ +S      C ++ P E  + ++              S  F
Sbjct: 768  TLTAD-------ELPSKASEASMDTMHKCLIRGPCEVETSVDNIIASCCLENEVTTSIPF 820

Query: 683  SKTQDF------DDQHSLRKRQKVD--PQEKLVVVEATE 775
            +   D       D+  SLRKRQK+D   +E L++ EATE
Sbjct: 821  TVDLDMHPPGVHDEIFSLRKRQKIDEPEEESLIMQEATE 859


>ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|222857820|gb|EEE95367.1|
            predicted protein [Populus trichocarpa]
          Length = 854

 Score =  213 bits (541), Expect = 5e-53
 Identities = 124/259 (47%), Positives = 164/259 (63%), Gaps = 1/259 (0%)
 Frame = +2

Query: 2    ARLANIDGVNQHLLAKYGDHILKTIRDLSEGLGLSVDGVSNLQVVNNQKICSMSNHSKEL 181
            ARLANIDGVNQHL+ ++GD++L+TIRDLS+ L LS+DG +NLQ  N +K   + NH K+L
Sbjct: 555  ARLANIDGVNQHLVVRHGDYLLQTIRDLSQELNLSLDGGANLQTANTRKANQVPNH-KKL 613

Query: 182  SPAKLQAWKMWQEDGLSFLKIANFPGRSAPIKEQTVVGYILDAARSGFVIDWMRLSEEIG 361
            +PAKL AWKMW E+GL   KIANFPGRSAPIKE +VV Y+L+AA+ G  I+W RL  E+G
Sbjct: 614  TPAKLDAWKMWHENGLPIQKIANFPGRSAPIKEGSVVEYLLEAAQGGLQIEWTRLCGEVG 673

Query: 362  LRQDVFINIQAAILKVGSKDKLKPIKDELPEEVSYAQISAVLTMQDLGLSKDVLLVNHQT 541
            L ++    I+ AI KVGS++KLKPIKDELPE++SYA I   L MQ+ G   +V   +H  
Sbjct: 674  LSRERLSEIEGAISKVGSREKLKPIKDELPEDISYAHIKICLAMQNCGFLPEVTPPSHLD 733

Query: 542  GHDADKCSNDMLELPKQSNNSSHVDSEICELKEPVEHPSLIEKSEAFSKTQDFDDQHSLR 721
               AD+      E    S  +S +D+        V    +  K  A     D +++ S  
Sbjct: 734  TSKADEFVES--ESGMVSTGTSCLDT--------VHEVEISVKIMATHCCSDHNEETS-- 781

Query: 722  KRQKVD-PQEKLVVVEATE 775
               KVD P+E    +EATE
Sbjct: 782  SLMKVDIPEESTTALEATE 800


>ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis]
            gi|223534248|gb|EEF35962.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 795

 Score =  210 bits (535), Expect = 2e-52
 Identities = 106/190 (55%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2    ARLANIDGVNQHLLAKYGDHILKTIRDLSEGLGLSVDGVSNLQV-VNNQKICSMSNHSKE 178
            ARLANI+GVNQHL+AK+GD IL++IR L++ L LS+DG ++LQ+ VN +K+C   N  K 
Sbjct: 498  ARLANIEGVNQHLVAKHGDRILQSIRHLTQELNLSLDGEASLQITVNTRKVCPTPNLQKT 557

Query: 179  LSPAKLQAWKMWQEDGLSFLKIANFPGRSAPIKEQTVVGYILDAARSGFVIDWMRLSEEI 358
            LSPAK +AWKMW EDGLS  KIAN P R APIK +TV  Y+LDAA+ G   DW+R   EI
Sbjct: 558  LSPAKFEAWKMWHEDGLSIHKIANLPSRQAPIKVETVCEYLLDAAQEGLEFDWIRFCSEI 617

Query: 359  GLRQDVFINIQAAILKVGSKDKLKPIKDELPEEVSYAQISAVLTMQDLGLSKDVLLVNHQ 538
            GL  ++F +IQ AI+KVGS++KLKPIK+ELPE+VSYA I   L MQ  G+S + +  +H 
Sbjct: 618  GLTGEIFSDIQGAIIKVGSREKLKPIKNELPEDVSYAHIKTFLAMQTSGMSLEGMQPSHL 677

Query: 539  TGHDADKCSN 568
            +    D   N
Sbjct: 678  SPSKDDPVQN 687


>ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
            helicase homolog [Glycine max]
          Length = 920

 Score =  204 bits (520), Expect = 1e-50
 Identities = 105/198 (53%), Positives = 136/198 (68%), Gaps = 9/198 (4%)
 Frame = +2

Query: 2    ARLANIDGVNQHLLAKYGDHILKTIRDLSEGLGLSVDG-----VSNLQVVNNQKICSMSN 166
            ARLANIDGVNQHL+ KYGDH L+ I+ LS+GL LS+DG      ++LQ    +K+  ++N
Sbjct: 591  ARLANIDGVNQHLVTKYGDHFLQVIQKLSQGLNLSLDGEARVATASLQTNEVRKVSLVTN 650

Query: 167  HSKELSPAKLQAWKMWQEDGLSFLKIANFPGRSAPIKEQTVVGYILDAARSGFVIDWMRL 346
             S +L+PAK +AWKMW EDG S  +IANFPGRSAPIKEQ V  Y+L+AA+ G   DW R 
Sbjct: 651  KSNKLTPAKFEAWKMWHEDGCSIHEIANFPGRSAPIKEQIVAEYLLEAAQEGLPFDWARF 710

Query: 347  SEEIGLRQDVFINIQAAILKVGSKDKLKPIKDELPEEVSYAQISAVLTMQDLGLSKDVL- 523
            SE IGL Q++   IQ AI KVGS DKLKPIK+ELP+E++Y  I   LTM++ G+S + + 
Sbjct: 711  SEMIGLTQEIISEIQGAISKVGSTDKLKPIKNELPKEITYQHIKTYLTMRNCGISLEAIQ 770

Query: 524  ---LVNHQTGHDADKCSN 568
               +   + G  A   SN
Sbjct: 771  SGSIQTEKDGEPAHNASN 788


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