BLASTX nr result

ID: Bupleurum21_contig00011755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011755
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ98024.1| predicted protein [Hordeum vulgare subsp. vulgar...   160   8e-38
ref|XP_002437774.1| hypothetical protein SORBIDRAFT_10g002370 [S...   160   1e-37
ref|XP_003557238.1| PREDICTED: uncharacterized protein LOC100836...   159   3e-37
dbj|BAK03047.1| predicted protein [Hordeum vulgare subsp. vulgare]    159   3e-37
gb|ABK95689.1| unknown [Populus trichocarpa]                          158   5e-37

>dbj|BAJ98024.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326526541|dbj|BAJ97287.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 316

 Score =  160 bits (406), Expect = 8e-38
 Identities = 68/120 (56%), Positives = 100/120 (83%)
 Frame = -2

Query: 368 RAQSFTFQSSSVTYGGSDGSYYTKSRSMRTGSDGLTIDETKEADSATGRAAHKLSRGIYE 189
           +++SFT+QSS+VTYGG +G+YYT S++ R+GSDG+T++E+KEAD+ T  A H++SRGI++
Sbjct: 153 QSRSFTYQSSTVTYGGINGAYYTASKTWRSGSDGITVEESKEADTTTKEATHRISRGIHD 212

Query: 188 KGHTVSRNLHSDGRVDTKQILHNISEDDLVGFEEAWKENTGKSMPGWSEALQVQNGSRSG 9
           KGH+V+R L SDG+VD+ QILHN++ED+L GFEE+WK N G+ +PGW++   + NG  SG
Sbjct: 213 KGHSVTRKLKSDGKVDSTQILHNLNEDELPGFEESWKGNAGQHLPGWNQNAGISNGDNSG 272


>ref|XP_002437774.1| hypothetical protein SORBIDRAFT_10g002370 [Sorghum bicolor]
           gi|241915997|gb|EER89141.1| hypothetical protein
           SORBIDRAFT_10g002370 [Sorghum bicolor]
          Length = 321

 Score =  160 bits (404), Expect = 1e-37
 Identities = 69/120 (57%), Positives = 98/120 (81%)
 Frame = -2

Query: 368 RAQSFTFQSSSVTYGGSDGSYYTKSRSMRTGSDGLTIDETKEADSATGRAAHKLSRGIYE 189
           +A++FT+QSSSVTYGG +G+YYT S++ RTGSDG+T++E+KEAD+ T  A H++SRGI++
Sbjct: 162 QARTFTYQSSSVTYGGINGAYYTASKTRRTGSDGITVEESKEADTTTKEATHRISRGIHD 221

Query: 188 KGHTVSRNLHSDGRVDTKQILHNISEDDLVGFEEAWKENTGKSMPGWSEALQVQNGSRSG 9
           KGH+++R L+SDG+VDT Q LHN++ED+L GFEE+WK N G  +PGW++   V N   SG
Sbjct: 222 KGHSLTRKLNSDGKVDTTQTLHNLNEDELAGFEESWKGNAGHYLPGWNQNAGVPNSDNSG 281


>ref|XP_003557238.1| PREDICTED: uncharacterized protein LOC100836371 [Brachypodium
           distachyon]
          Length = 304

 Score =  159 bits (401), Expect = 3e-37
 Identities = 68/121 (56%), Positives = 98/121 (80%)
 Frame = -2

Query: 371 SRAQSFTFQSSSVTYGGSDGSYYTKSRSMRTGSDGLTIDETKEADSATGRAAHKLSRGIY 192
           S+ ++F++QSSSVTYGG +G+YYT S++ R+GSDG+T++E+KEAD+ T  A H++SRGI+
Sbjct: 146 SQPRAFSYQSSSVTYGGINGAYYTASKTRRSGSDGITVEESKEADTTTKEATHRISRGIH 205

Query: 191 EKGHTVSRNLHSDGRVDTKQILHNISEDDLVGFEEAWKENTGKSMPGWSEALQVQNGSRS 12
           +KGH+V+R L SDG+VD+ QILHN+ ED+L GFEE+WK N G+ +PGW+    + NG  S
Sbjct: 206 DKGHSVTRKLKSDGKVDSTQILHNLDEDELPGFEESWKGNAGQHLPGWNHNAGISNGDNS 265

Query: 11  G 9
           G
Sbjct: 266 G 266


>dbj|BAK03047.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 316

 Score =  159 bits (401), Expect = 3e-37
 Identities = 67/120 (55%), Positives = 99/120 (82%)
 Frame = -2

Query: 368 RAQSFTFQSSSVTYGGSDGSYYTKSRSMRTGSDGLTIDETKEADSATGRAAHKLSRGIYE 189
           +++SFT+QSS+VTYGG +G+YY  S++ R+GSDG+T++E+KEAD+ T  A H++SRGI++
Sbjct: 153 QSRSFTYQSSTVTYGGINGAYYAASKTWRSGSDGITVEESKEADTTTKEATHRISRGIHD 212

Query: 188 KGHTVSRNLHSDGRVDTKQILHNISEDDLVGFEEAWKENTGKSMPGWSEALQVQNGSRSG 9
           KGH+V+R L SDG+VD+ QILHN++ED+L GFEE+WK N G+ +PGW++   + NG  SG
Sbjct: 213 KGHSVTRKLKSDGKVDSTQILHNLNEDELPGFEESWKGNAGQHLPGWNQNAGISNGDNSG 272


>gb|ABK95689.1| unknown [Populus trichocarpa]
          Length = 372

 Score =  158 bits (399), Expect = 5e-37
 Identities = 73/123 (59%), Positives = 101/123 (82%), Gaps = 3/123 (2%)
 Frame = -2

Query: 368 RAQSFTFQSSSVTYGGSDGSYYTKSRSMRTGSDGLTIDETKEADSATGRAAHKLSRGIYE 189
           + +SFTFQSS+VT+GG++G+YYT S++ R GSDGLT +E+K ADSATG+A HK+SRG++ 
Sbjct: 191 QGRSFTFQSSTVTHGGANGAYYTSSKTRRAGSDGLTFEESKAADSATGQATHKVSRGLHN 250

Query: 188 KGHTVSRNLHSDGRVDTKQILHNISEDDLVGFEEAWKENTGKSMPGWSEALQ-VQN--GS 18
           KGH+++R L+SDGRV+T Q+LHN++ED+L GFEEAWK N GK +PGW+ +   + N   S
Sbjct: 251 KGHSLTRKLNSDGRVNTMQMLHNLNEDELTGFEEAWKGNAGKHLPGWTGSFTGIDNIGAS 310

Query: 17  RSG 9
           RSG
Sbjct: 311 RSG 313


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