BLASTX nr result

ID: Bupleurum21_contig00011752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011752
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327850.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
emb|CBI39182.3| unnamed protein product [Vitis vinifera]              106   6e-21
ref|XP_002310452.1| predicted protein [Populus trichocarpa] gi|2...   104   2e-20
ref|XP_002529771.1| hypothetical protein RCOM_0575190 [Ricinus c...    88   2e-15
gb|AAM13159.1| unknown protein [Arabidopsis thaliana] gi|2508383...    87   5e-15

>ref|XP_002327850.1| predicted protein [Populus trichocarpa] gi|222837259|gb|EEE75638.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  110 bits (274), Expect = 4e-22
 Identities = 79/218 (36%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
 Frame = -1

Query: 587 MATPPPSSSVAGELKSPDTP-LFRSLLKTKWKKTNAHTPASDAKTHLRSRRK-------- 435
           MA  P   S+ G  K    P    S  K +   +++ TPAS  K  +RS  +        
Sbjct: 1   MADVPTHLSINGAKKEKTRPGKMSSEAKKRKGFSSSTTPASLTKILIRSLSRLNPRTPSN 60

Query: 434 ----------QVMLRDWWLTKVKVEVPNALFKLGVAGYASF-GRSVVYFSSTEIVSRHIG 288
                      V L DWWL KV+         L V+G+ S  G     F S  IV RH  
Sbjct: 61  TVPLSSLSLNSVWLHDWWLVKVEGN------GLAVSGFTSREGVGTRLFCSAAIVKRHYT 114

Query: 287 GTLETTDGITITLFGLINRSRAHENGFPFQVCSLFAFGFPFDWEQIGD*YFRGESVDRGR 108
             LE  DGIT+TL G INR RAHENGF FQ+C  F  GFP+ WE+I       ES + G 
Sbjct: 115 TILEAKDGITVTLSGFINRDRAHENGFSFQICDRFQLGFPYSWEEIAAKLRGEESANGGS 174

Query: 107 PSNVT-----SVSNGDANSSPGLSFKDPPVTRFFDHMM 9
           P   +     ++S+G + ++  +SF D PVTR  D +M
Sbjct: 175 PRGKSGLVELNMSSGISTNTASVSFDDIPVTRIRDILM 212


>emb|CBI39182.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score =  106 bits (264), Expect = 6e-21
 Identities = 68/172 (39%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
 Frame = -1

Query: 503 KWKKTNAHTPASDAKTHLRSRRKQVMLRDWWLTKVKVEVPNALFKLGVAGYASFGRSVV- 327
           K + +N       A + LRS    V L DWWL K          +L V G+A+  R  + 
Sbjct: 3   KGESSNTKATIISASSFLRS----VTLHDWWLLKTNAN------RLAVGGFATRERQGIR 52

Query: 326 YFSSTEIVSRHIGGTLETTDGITITLFGLINRSRAHENGFPFQVCSLFAFGFPFDWEQIG 147
            FSS  I  RH   TLET DGITIT+ G +N+SR H+NGFP +VC  F FGFP+ WE+  
Sbjct: 53  VFSSGAIAKRHDATTLETADGITITIVGFLNKSRTHQNGFPSEVCKHFLFGFPYHWEEYA 112

Query: 146 D*YFRGESVDRG---RPSNVTSVSNGDANSSPGL---SFKDPPVTRFFDHMM 9
              F GES   G   +PS     +    +S   L   S  + PVTR  D +M
Sbjct: 113 VQCFVGESTKSGVSKKPSGCEEFNLPSTSSENNLLPASLDELPVTRVRDLLM 164


>ref|XP_002310452.1| predicted protein [Populus trichocarpa] gi|222853355|gb|EEE90902.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  104 bits (259), Expect = 2e-20
 Identities = 73/201 (36%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
 Frame = -1

Query: 587 MATPPP--SSSVAGELKSPDTPLFRSLLKTKWKKTNAHTPASDAKTHLRSRRKQVMLRDW 414
           M+T P    SS A    S    L RSL   K +  N  TP S          K V L DW
Sbjct: 1   MSTDPKRKGSSSATTPASLTKILHRSLSHLKSRTPNNITPVSSLSL------KSVWLYDW 54

Query: 413 WLTKVK---VEVPNALFKLGVAGYASFGR-SVVYFSSTEIVSRHIGGTLETTDGITITLF 246
           WL K +   + V    F+  V G+  F +   ++     IV RH    LE+ DGIT+T+ 
Sbjct: 55  WLAKAEGDGLAVSGFTFREFVFGHKLFYKLGSIFLLMITIVRRHYATILESKDGITVTIS 114

Query: 245 GLINRSRAHENGFPFQVCSLFAFGFPFDWEQIGD*YFRGESVDRGRPSNVT-----SVSN 81
           G INR R  ENGF FQ+C  F  GFP+ W ++       ES +RG P   +      +S+
Sbjct: 115 GFINRDRTRENGFSFQICEHFQLGFPYSWLELATRLGGEESANRGSPPGKSGFDEPKMSS 174

Query: 80  GDANSSPGLSFKDPPVTRFFD 18
           G + S+  +SF D PVTR  D
Sbjct: 175 GTSTSAASVSFDDLPVTRIRD 195


>ref|XP_002529771.1| hypothetical protein RCOM_0575190 [Ricinus communis]
           gi|223530769|gb|EEF32637.1| hypothetical protein
           RCOM_0575190 [Ricinus communis]
          Length = 368

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 63/165 (38%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
 Frame = -1

Query: 479 TPASDAKTHLRSRRKQVMLRDWWLTKVKVEVPNALFKLGVAGYAS---FGRSVVYFSSTE 309
           TPAS          K V+L DWWL K          ++ VAG AS    G  V  F S  
Sbjct: 27  TPASSLSL------KSVLLHDWWLLKADSR------RISVAGLASRQRLGNRV--FLSAP 72

Query: 308 IVSRHIGGTLETTDGITITLFGLINRSRAHENGFPFQVCSLFAFGFPFDWEQIGD*YFRG 129
           I  R    TLET DGITIT+ G INRS+ H+NG  F VC+ F  GFP+ WE+    ++  
Sbjct: 73  ISRRIDATTLETIDGITITISGFINRSKTHQNGISFLVCNQFKLGFPYHWEECVAQFYGE 132

Query: 128 ESVDRGRPSNVT-----SVSNGDANSSPGLSFKDPPVTRFFDHMM 9
           ES  +  P   +     ++S+G  N+ P  +  D P TR  D +M
Sbjct: 133 ESAKQEAPHRNSGFIEHNISSG-TNAMPS-TLDDLPATRLRDLVM 175


>gb|AAM13159.1| unknown protein [Arabidopsis thaliana] gi|25083835|gb|AAN72124.1|
           unknown protein [Arabidopsis thaliana]
          Length = 281

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 57/141 (40%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
 Frame = -1

Query: 437 KQVMLRDWWLTKVKVEVPNALFKLGVAGYASFGRSVV-YFSSTEIVSRHIGGTLETTDGI 261
           K V L DWWLTK   +       L + G+ S G S V  FSS  I  RH   TLE  DGI
Sbjct: 64  KSVTLSDWWLTKKGKD-------LCIKGFESNGASGVRLFSSGTISKRHESTTLEAIDGI 116

Query: 260 TITLFGLINRSRAHENGFPFQVCSLFAFGFPFDWEQIGD*YFRGESVDRGRPSNVTSVSN 81
           TI++ G INRSR  ENG   +VC+ F  GFP+DWE         E  +  +  NV     
Sbjct: 117 TISINGFINRSRCLENGISIEVCNRFRLGFPYDWEDY------NEEEEEKKKKNV----- 165

Query: 80  GDANSSPGLSFKDPPVTRFFD 18
                   +SF D PV R+ D
Sbjct: 166 -------DISFDDIPVNRYQD 179


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