BLASTX nr result

ID: Bupleurum21_contig00011751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011751
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39182.3| unnamed protein product [Vitis vinifera]               69   4e-20
ref|XP_002327850.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-19
ref|XP_002310452.1| predicted protein [Populus trichocarpa] gi|2...    69   8e-15
ref|XP_002529771.1| hypothetical protein RCOM_0575190 [Ricinus c...    56   5e-13
ref|XP_002886709.1| EMB1674 [Arabidopsis lyrata subsp. lyrata] g...    51   7e-13

>emb|CBI39182.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score = 69.3 bits (168), Expect(2) = 4e-20
 Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
 Frame = +1

Query: 400 RSRTHENGFPSQVCSDFAIGFPFDWEQIGAQYFGGESIDRG------RLSDVTSMSNGDA 561
           +SRTH+NGFPS+VC  F  GFP+ WE+   Q F GES   G         +    S    
Sbjct: 84  KSRTHQNGFPSEVCKHFLFGFPYHWEEYAVQCFVGESTKSGVSKKPSGCEEFNLPSTSSE 143

Query: 562 NSPPALSFKDLPVTRYFDHMMLSSGDYNECTQIKTLFDDIL 684
           N+    S  +LPVTR  D +M + GD    T   ++F DI+
Sbjct: 144 NNLLPASLDELPVTRVRDLLMSTLGDSKTLT--NSIFSDIV 182



 Score = 54.7 bits (130), Expect(2) = 4e-20
 Identities = 34/86 (39%), Positives = 44/86 (51%)
 Frame = +3

Query: 36  GKLKSPDTPLSDVETHLLTKQVILSDWWLTKVKVQIPNPLFKLGVAGNAYGPVVHFSSSE 215
           GK +S +T  + +      + V L DWWL K      N L   G A      +  FSS  
Sbjct: 2   GKGESSNTKATIISASSFLRSVTLHDWWLLKTNA---NRLAVGGFATRERQGIRVFSSGA 58

Query: 216 IVKRHIEGTLETADGITIILMGPINR 293
           I KRH   TLETADGITI ++G +N+
Sbjct: 59  IAKRHDATTLETADGITITIVGFLNK 84


>ref|XP_002327850.1| predicted protein [Populus trichocarpa] gi|222837259|gb|EEE75638.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score = 73.6 bits (179), Expect(2) = 4e-19
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
 Frame = +1

Query: 400 RSRTHENGFPSQVCSDFAIGFPFDWEQIGAQYFGGESID----RGRLSDV-TSMSNGDAN 564
           R R HENGF  Q+C  F +GFP+ WE+I A+  G ES +    RG+   V  +MS+G + 
Sbjct: 133 RDRAHENGFSFQICDRFQLGFPYSWEEIAAKLRGEESANGGSPRGKSGLVELNMSSGIST 192

Query: 565 SPPALSFKDLPVTRYFDHMMLSSGDYNECTQIKTLFDDILSEYGS 699
           +  ++SF D+PVTR  D +M   GD  +C       +DIL  + S
Sbjct: 193 NTASVSFDDIPVTRIRDILMHPLGDPKDCA-----LEDILGSFCS 232



 Score = 47.4 bits (111), Expect(2) = 4e-19
 Identities = 34/83 (40%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +3

Query: 48  SPDTPLSDVETHLLT-KQVILSDWWLTKVKVQIPNPLFKLGVAGNAYGPVVHFSSSEIVK 224
           +P TP + V    L+   V L DWWL KV+    N L   G           F S+ IVK
Sbjct: 54  NPRTPSNTVPLSSLSLNSVWLHDWWLVKVE---GNGLAVSGFTSREGVGTRLFCSAAIVK 110

Query: 225 RHIEGTLETADGITIILMGPINR 293
           RH    LE  DGIT+ L G INR
Sbjct: 111 RHYTTILEAKDGITVTLSGFINR 133


>ref|XP_002310452.1| predicted protein [Populus trichocarpa] gi|222853355|gb|EEE90902.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 68.9 bits (167), Expect(2) = 8e-15
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = +1

Query: 400 RSRTHENGFPSQVCSDFAIGFPFDWEQIGAQYFGGESIDRGRLS-----DVTSMSNGDAN 564
           R RT ENGF  Q+C  F +GFP+ W ++  +  G ES +RG        D   MS+G + 
Sbjct: 119 RDRTRENGFSFQICEHFQLGFPYSWLELATRLGGEESANRGSPPGKSGFDEPKMSSGTST 178

Query: 565 SPPALSFKDLPVTRYFDHMMLSSGDYNEC 651
           S  ++SF DLPVTR  D      GD  +C
Sbjct: 179 SAASVSFDDLPVTRIRDIATHPLGDSKDC 207



 Score = 37.4 bits (85), Expect(2) = 8e-15
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
 Frame = +3

Query: 39  KLKSPD--TPLSDVETHLLTKQVILSDWWLTKVK---VQIPNPLFKLGVAGNAYG---PV 194
           K ++P+  TP+S     L  K V L DWWL K +   + +    F+  V G+        
Sbjct: 31  KSRTPNNITPVSS----LSLKSVWLYDWWLAKAEGDGLAVSGFTFREFVFGHKLFYKLGS 86

Query: 195 VHFSSSEIVKRHIEGTLETADGITIILMGPINR 293
           +      IV+RH    LE+ DGIT+ + G INR
Sbjct: 87  IFLLMITIVRRHYATILESKDGITVTISGFINR 119


>ref|XP_002529771.1| hypothetical protein RCOM_0575190 [Ricinus communis]
           gi|223530769|gb|EEF32637.1| hypothetical protein
           RCOM_0575190 [Ricinus communis]
          Length = 368

 Score = 55.8 bits (133), Expect(2) = 5e-13
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
 Frame = +1

Query: 400 RSRTHENGFPSQVCSDFAIGFPFDWEQIGAQYFGGESIDR---GRLSDVTSMSNGDANSP 570
           RS+TH+NG    VC+ F +GFP+ WE+  AQ++G ES  +    R S     +     + 
Sbjct: 98  RSKTHQNGISFLVCNQFKLGFPYHWEECVAQFYGEESAKQEAPHRNSGFIEHNISSGTNA 157

Query: 571 PALSFKDLPVTRYFDHMMLSSGDYNEC 651
              +  DLP TR  D +M  + D   C
Sbjct: 158 MPSTLDDLPATRLRDLVMHLAEDSENC 184



 Score = 44.3 bits (103), Expect(2) = 5e-13
 Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
 Frame = +3

Query: 45  KSPDTPLSDVETHLLTKQVILSDWWLTKVKVQIPNPLFKLGVAGNAYGPVVH---FSSSE 215
           ++P TP S     L  K V+L DWWL K   +      ++ VAG A    +    F S+ 
Sbjct: 23  RTPITPASS----LSLKSVLLHDWWLLKADSR------RISVAGLASRQRLGNRVFLSAP 72

Query: 216 IVKRHIEGTLETADGITIILMGPINR 293
           I +R    TLET DGITI + G INR
Sbjct: 73  ISRRIDATTLETIDGITITISGFINR 98


>ref|XP_002886709.1| EMB1674 [Arabidopsis lyrata subsp. lyrata]
           gi|297332550|gb|EFH62968.1| EMB1674 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1287

 Score = 50.8 bits (120), Expect(2) = 7e-13
 Identities = 36/86 (41%), Positives = 41/86 (47%)
 Frame = +3

Query: 36  GKLKSPDTPLSDVETHLLTKQVILSDWWLTKVKVQIPNPLFKLGVAGNAYGPVVHFSSSE 215
           G  ++P  PLS +      K + LSDWWL K        L   G   N    V  FSS  
Sbjct: 44  GTFRTP-FPLSLITPIKTLKSITLSDWWLKKKS----KGLSITGFESNGGSGVRLFSSGT 98

Query: 216 IVKRHIEGTLETADGITIILMGPINR 293
           I KRH   TLE  DGITI + G INR
Sbjct: 99  ISKRHESTTLEAIDGITISINGFINR 124



 Score = 48.9 bits (115), Expect(2) = 7e-13
 Identities = 33/108 (30%), Positives = 50/108 (46%)
 Frame = +1

Query: 400 RSRTHENGFPSQVCSDFAIGFPFDWEQIGAQYFGGESIDRGRLSDVTSMSNGDANSPPAL 579
           RSR+ ENG  ++VC+ F +GFP+DWE    +    E  ++  + D+              
Sbjct: 124 RSRSLENGVSNEVCNRFRLGFPYDWEDYNVE----EEEEKKNVVDI-------------- 165

Query: 580 SFKDLPVTRYFDHMMLSSGDYNECTQIKTLFDDILSEYGSCIELNDKD 723
           SF D+PV RY D   L       C + K L D + S      ++ DK+
Sbjct: 166 SFDDIPVNRYQDLYCLEG-----CLKDKILDDVVSSLRDLVCQIFDKE 208


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