BLASTX nr result

ID: Bupleurum21_contig00011746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011746
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B gi|2326872|em...   587   e-165
gb|ACC60966.1| phytochrome B [Vitis vinifera]                         585   e-165
emb|CBI22877.3| unnamed protein product [Vitis vinifera]              585   e-164
ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]    585   e-164
gb|ACC60970.1| phytochrome B [Vitis riparia]                          585   e-164

>sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B gi|2326872|emb|CAA74908.1| phytochrome B
            [Solanum tuberosum]
          Length = 1130

 Score =  587 bits (1513), Expect = e-165
 Identities = 287/388 (73%), Positives = 333/388 (85%)
 Frame = -1

Query: 1449 KVVMDKFINIQGDYKAXXXXXXXXXXXIFASDENTCCSEWNMAMEKLTGLSRGDVIGKVL 1270
            KVVMDKFINIQGDYKA           IFASDENTCCSEWN AMEKLTG SRG+++GK+L
Sbjct: 743  KVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIVGKML 802

Query: 1269 VGEVFGSCCRLKGPDALTKFMIILHNAIGGQETDKFPFSFFDQSGKYVQALLTANKRVNM 1090
            VGE+FGSCCRLKGPDA+TKFMI+LHNAIGGQ+TDKFPFSFFD++GKYVQALLTANKRVNM
Sbjct: 803  VGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKYVQALLTANKRVNM 862

Query: 1089 EGQISGAFCFLQIASPELQQALEMQRQQENRCYGRMKELAYICQEIKKPLSGIRFTNSLL 910
            EG   GAFCF+QIASPELQQAL +QRQQE +CY +MKELAYICQEIK PL+GIRFTNSLL
Sbjct: 863  EGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEIKSPLNGIRFTNSLL 922

Query: 909  EATNLTEDQKQFLETSAACEKQMLKIIKDVNXXXXXXXXXXXEKADFLLGGVIDAVVSQG 730
            EATNLTE+QKQ+LETSAACE+QM KII+D++           EK DF LG VIDAVVSQ 
Sbjct: 923  EATNLTENQKQYLETSAACERQMSKIIRDIDLENIEDGSLTLEKEDFFLGSVIDAVVSQV 982

Query: 729  MIMLREKGLQLICDIPEEIKTLCVYGDQIRLQQVLANFLLNIVRYAPSPQGWVEIQVLPK 550
            M++LREKG+QLI DIPEEIKTL V+GDQ+R+QQVLA+FLLN+VRYAPSP GWVEIQ+ P 
Sbjct: 983  MLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAPSPDGWVEIQLRPS 1042

Query: 549  MKQISNGITTLCSEFRIVCPGEGLPSELIQDMFNSSLWVTQEGLGLSMSRKILKLMNGDV 370
            M  IS+G+T +  E RI+CPGEGLP EL+QDMF+SS WVTQEGLGLSM RK+LKLMNG++
Sbjct: 1043 MMPISDGVTVVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKMLKLMNGEI 1102

Query: 369  QYIREAERCYFHIIIELPVSQDSSDNVG 286
            QYIRE+ERCYF II++LP+++    +VG
Sbjct: 1103 QYIRESERCYFLIILDLPMTRKGPKSVG 1130


>gb|ACC60966.1| phytochrome B [Vitis vinifera]
          Length = 1129

 Score =  585 bits (1509), Expect = e-165
 Identities = 294/387 (75%), Positives = 332/387 (85%)
 Frame = -1

Query: 1449 KVVMDKFINIQGDYKAXXXXXXXXXXXIFASDENTCCSEWNMAMEKLTGLSRGDVIGKVL 1270
            KVVMDKFI+IQGDYKA           IFASDENT CSEWN AMEKLTG SRGD+IGK+L
Sbjct: 742  KVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTAMEKLTGWSRGDIIGKIL 801

Query: 1269 VGEVFGSCCRLKGPDALTKFMIILHNAIGGQETDKFPFSFFDQSGKYVQALLTANKRVNM 1090
            VGE+FGS CRLKGPDALTKFMI+LHNAIGGQ+TDKFPFSFFDQ+GKYVQALLTANKRVN+
Sbjct: 802  VGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSFFDQNGKYVQALLTANKRVNI 861

Query: 1089 EGQISGAFCFLQIASPELQQALEMQRQQENRCYGRMKELAYICQEIKKPLSGIRFTNSLL 910
            EGQI GAFCFLQIASPELQQAL++QRQQE +C+ RMKELAYICQEIK PLSGIRFTNSLL
Sbjct: 862  EGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELAYICQEIKNPLSGIRFTNSLL 921

Query: 909  EATNLTEDQKQFLETSAACEKQMLKIIKDVNXXXXXXXXXXXEKADFLLGGVIDAVVSQG 730
            EAT+LTEDQKQFLETSAACEKQM KII+DV+           E+A+FLLG VI+AVVSQ 
Sbjct: 922  EATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSLELERAEFLLGSVINAVVSQV 981

Query: 729  MIMLREKGLQLICDIPEEIKTLCVYGDQIRLQQVLANFLLNIVRYAPSPQGWVEIQVLPK 550
            MI+LRE+ LQLI DIPEE+KTL VYGDQ+R+QQVLA+FLLN+VRYAPSP GW+EIQV P+
Sbjct: 982  MILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLLNMVRYAPSPDGWIEIQVCPR 1041

Query: 549  MKQISNGITTLCSEFRIVCPGEGLPSELIQDMFNSSLWVTQEGLGLSMSRKILKLMNGDV 370
            +KQIS  +  +  EFR+VCPGEGLP  LIQDMF+SS W+TQEGLGLSM RKILKL+NG+V
Sbjct: 1042 LKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWMTQEGLGLSMCRKILKLINGEV 1101

Query: 369  QYIREAERCYFHIIIELPVSQDSSDNV 289
            QYIRE+ERCYF I IELP+    S +V
Sbjct: 1102 QYIRESERCYFLISIELPIPHRGSKSV 1128


>emb|CBI22877.3| unnamed protein product [Vitis vinifera]
          Length = 982

 Score =  585 bits (1507), Expect = e-164
 Identities = 295/387 (76%), Positives = 333/387 (86%)
 Frame = -1

Query: 1449 KVVMDKFINIQGDYKAXXXXXXXXXXXIFASDENTCCSEWNMAMEKLTGLSRGDVIGKVL 1270
            KVVMDKFI+IQGDYKA           IFASDENT CSEWN AMEKLTG SRGD+IGK+L
Sbjct: 595  KVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTAMEKLTGWSRGDIIGKML 654

Query: 1269 VGEVFGSCCRLKGPDALTKFMIILHNAIGGQETDKFPFSFFDQSGKYVQALLTANKRVNM 1090
            VGE+FGS CRLKGPDALTKFMI+LHNAIGGQ+TDKFPFSFFDQ+GKYVQALLTANKRVN+
Sbjct: 655  VGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSFFDQNGKYVQALLTANKRVNI 714

Query: 1089 EGQISGAFCFLQIASPELQQALEMQRQQENRCYGRMKELAYICQEIKKPLSGIRFTNSLL 910
            EGQI GAFCFLQIASPELQQAL++QRQQE +C+ RMKELAYICQEIK PLSGIRFTNSLL
Sbjct: 715  EGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELAYICQEIKNPLSGIRFTNSLL 774

Query: 909  EATNLTEDQKQFLETSAACEKQMLKIIKDVNXXXXXXXXXXXEKADFLLGGVIDAVVSQG 730
            EAT+LTEDQKQFLETSAACEKQM KII+DV+           E+A+FLLG VI+AVVSQ 
Sbjct: 775  EATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSLELERAEFLLGSVINAVVSQV 834

Query: 729  MIMLREKGLQLICDIPEEIKTLCVYGDQIRLQQVLANFLLNIVRYAPSPQGWVEIQVLPK 550
            MI+LRE+ LQLI DIPEE+KTL VYGDQ+R+QQVLA+FLLN+VRYAPSP GW+EIQV P+
Sbjct: 835  MILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLLNMVRYAPSPDGWIEIQVHPR 894

Query: 549  MKQISNGITTLCSEFRIVCPGEGLPSELIQDMFNSSLWVTQEGLGLSMSRKILKLMNGDV 370
            +KQIS  +  +  EFR+VCPGEGLP  LIQDMF+SS W+TQEGLGLSM RKILKL+NG+V
Sbjct: 895  LKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWMTQEGLGLSMCRKILKLINGEV 954

Query: 369  QYIREAERCYFHIIIELPVSQDSSDNV 289
            QYIRE+ERCYF I IELPV +  S +V
Sbjct: 955  QYIRESERCYFLISIELPVPRRGSKSV 981


>ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]
          Length = 1129

 Score =  585 bits (1507), Expect = e-164
 Identities = 295/387 (76%), Positives = 333/387 (86%)
 Frame = -1

Query: 1449 KVVMDKFINIQGDYKAXXXXXXXXXXXIFASDENTCCSEWNMAMEKLTGLSRGDVIGKVL 1270
            KVVMDKFI+IQGDYKA           IFASDENT CSEWN AMEKLTG SRGD+IGK+L
Sbjct: 742  KVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTAMEKLTGWSRGDIIGKML 801

Query: 1269 VGEVFGSCCRLKGPDALTKFMIILHNAIGGQETDKFPFSFFDQSGKYVQALLTANKRVNM 1090
            VGE+FGS CRLKGPDALTKFMI+LHNAIGGQ+TDKFPFSFFDQ+GKYVQALLTANKRVN+
Sbjct: 802  VGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSFFDQNGKYVQALLTANKRVNI 861

Query: 1089 EGQISGAFCFLQIASPELQQALEMQRQQENRCYGRMKELAYICQEIKKPLSGIRFTNSLL 910
            EGQI GAFCFLQIASPELQQAL++QRQQE +C+ RMKELAYICQEIK PLSGIRFTNSLL
Sbjct: 862  EGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELAYICQEIKNPLSGIRFTNSLL 921

Query: 909  EATNLTEDQKQFLETSAACEKQMLKIIKDVNXXXXXXXXXXXEKADFLLGGVIDAVVSQG 730
            EAT+LTEDQKQFLETSAACEKQM KII+DV+           E+A+FLLG VI+AVVSQ 
Sbjct: 922  EATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSLELERAEFLLGSVINAVVSQV 981

Query: 729  MIMLREKGLQLICDIPEEIKTLCVYGDQIRLQQVLANFLLNIVRYAPSPQGWVEIQVLPK 550
            MI+LRE+ LQLI DIPEE+KTL VYGDQ+R+QQVLA+FLLN+VRYAPSP GW+EIQV P+
Sbjct: 982  MILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLLNMVRYAPSPDGWIEIQVHPR 1041

Query: 549  MKQISNGITTLCSEFRIVCPGEGLPSELIQDMFNSSLWVTQEGLGLSMSRKILKLMNGDV 370
            +KQIS  +  +  EFR+VCPGEGLP  LIQDMF+SS W+TQEGLGLSM RKILKL+NG+V
Sbjct: 1042 LKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWMTQEGLGLSMCRKILKLINGEV 1101

Query: 369  QYIREAERCYFHIIIELPVSQDSSDNV 289
            QYIRE+ERCYF I IELPV +  S +V
Sbjct: 1102 QYIRESERCYFLISIELPVPRRGSKSV 1128


>gb|ACC60970.1| phytochrome B [Vitis riparia]
          Length = 1129

 Score =  585 bits (1507), Expect = e-164
 Identities = 294/387 (75%), Positives = 333/387 (86%)
 Frame = -1

Query: 1449 KVVMDKFINIQGDYKAXXXXXXXXXXXIFASDENTCCSEWNMAMEKLTGLSRGDVIGKVL 1270
            KVVMDKFI+IQGDYKA           IFASDENT CSEWN AMEKLTG SRGD+IGK+L
Sbjct: 742  KVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTAMEKLTGWSRGDIIGKML 801

Query: 1269 VGEVFGSCCRLKGPDALTKFMIILHNAIGGQETDKFPFSFFDQSGKYVQALLTANKRVNM 1090
            VGE+FGS CRLKGPDALTKFMI+LHNAIGGQ+TDKFPFSFFDQ+GKYVQALLTANKRVN+
Sbjct: 802  VGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSFFDQNGKYVQALLTANKRVNI 861

Query: 1089 EGQISGAFCFLQIASPELQQALEMQRQQENRCYGRMKELAYICQEIKKPLSGIRFTNSLL 910
            EGQI GAFCFLQIASPELQQAL++QRQQE +C+ RMKELAYICQEIK PLSGIRFTNSLL
Sbjct: 862  EGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELAYICQEIKNPLSGIRFTNSLL 921

Query: 909  EATNLTEDQKQFLETSAACEKQMLKIIKDVNXXXXXXXXXXXEKADFLLGGVIDAVVSQG 730
            EAT+LTEDQKQFLETSAACEKQM KII+DV+           E+A+FLLG VI+AVVSQ 
Sbjct: 922  EATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSLELERAEFLLGSVINAVVSQV 981

Query: 729  MIMLREKGLQLICDIPEEIKTLCVYGDQIRLQQVLANFLLNIVRYAPSPQGWVEIQVLPK 550
            MI+LRE+ LQLI DIPEE+KTL VYGDQ+R+QQVLA+FLLN+VRYAPSP GW+EIQV P+
Sbjct: 982  MILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLLNMVRYAPSPDGWIEIQVRPR 1041

Query: 549  MKQISNGITTLCSEFRIVCPGEGLPSELIQDMFNSSLWVTQEGLGLSMSRKILKLMNGDV 370
            +KQIS  +  +  EFR+VCPGEGLP  LIQDMF+SS W+TQEGLGLSM RKILKL+NG+V
Sbjct: 1042 LKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWMTQEGLGLSMCRKILKLINGEV 1101

Query: 369  QYIREAERCYFHIIIELPVSQDSSDNV 289
            QYIRE+ERCYF I IELP+ +  S +V
Sbjct: 1102 QYIRESERCYFLISIELPIPRRGSKSV 1128


Top