BLASTX nr result

ID: Bupleurum21_contig00011734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011734
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48784.1| unknown [Lotus japonicus]                              183   1e-44
ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis...   181   6e-44
ref|XP_002513313.1| conserved hypothetical protein [Ricinus comm...   179   2e-43
ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [...   177   8e-43
ref|XP_003529438.1| PREDICTED: reticulon-like protein B22-like [...   174   9e-42

>gb|AFK48784.1| unknown [Lotus japonicus]
          Length = 183

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/106 (83%), Positives = 97/106 (91%)
 Frame = -1

Query: 320 GKTMIGLICGSLVYYHCAFRNSTLVSLLSDVFIVLLCSLAILGLLFRQINISVPVDPLEW 141
           GK +I L+CG+LVYYHCA+RNST+VSL SDVFIVLLCSLAILGLLFRQ+NI VPVDPLEW
Sbjct: 22  GKAIIALVCGTLVYYHCAYRNSTVVSLFSDVFIVLLCSLAILGLLFRQMNIQVPVDPLEW 81

Query: 140 QISQDTANGIFACLANTIGAAESVLRVAATGHDKRLFLKVVASLYL 3
           QISQDTAN I ACLANT+GAAESVLRVAATGHDKRLF KV+  LY+
Sbjct: 82  QISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLYV 127


>ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis vinifera]
           gi|297735759|emb|CBI18446.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  181 bits (459), Expect = 6e-44
 Identities = 88/106 (83%), Positives = 99/106 (93%)
 Frame = -1

Query: 320 GKTMIGLICGSLVYYHCAFRNSTLVSLLSDVFIVLLCSLAILGLLFRQINISVPVDPLEW 141
           GK +I +ICG+L+YYHCA+RNSTL++L+SDV IVLLCSLAILGLLFRQINISVPVDPLEW
Sbjct: 8   GKPVIVMICGTLIYYHCAYRNSTLLTLVSDVLIVLLCSLAILGLLFRQINISVPVDPLEW 67

Query: 140 QISQDTANGIFACLANTIGAAESVLRVAATGHDKRLFLKVVASLYL 3
           QISQDTAN I AC+ANTIGAAESVLRVAATGHDKRLF+KVV  LY+
Sbjct: 68  QISQDTANNIVACMANTIGAAESVLRVAATGHDKRLFVKVVVCLYV 113


>ref|XP_002513313.1| conserved hypothetical protein [Ricinus communis]
           gi|223547221|gb|EEF48716.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 169

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/106 (83%), Positives = 98/106 (92%)
 Frame = -1

Query: 320 GKTMIGLICGSLVYYHCAFRNSTLVSLLSDVFIVLLCSLAILGLLFRQINISVPVDPLEW 141
           GK +IG++CG+LVYYHCA+RN++L+SLLSDV IVLLCSLAILGLLFRQ+NISVPVDPLEW
Sbjct: 11  GKAIIGMVCGTLVYYHCAYRNASLLSLLSDVLIVLLCSLAILGLLFRQMNISVPVDPLEW 70

Query: 140 QISQDTANGIFACLANTIGAAESVLRVAATGHDKRLFLKVVASLYL 3
           QISQDTAN I A  ANTIGAAESVLRVAATGHDKRLF KVV SLY+
Sbjct: 71  QISQDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFKVVISLYV 116


>ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [Cucumis sativus]
          Length = 188

 Score =  177 bits (449), Expect = 8e-43
 Identities = 86/105 (81%), Positives = 96/105 (91%)
 Frame = -1

Query: 320 GKTMIGLICGSLVYYHCAFRNSTLVSLLSDVFIVLLCSLAILGLLFRQINISVPVDPLEW 141
           GK  + LICGSLVYYHCAFRNS+L+SL++DVFIVLLCSLAILGLLFR +N+SVPVDPLEW
Sbjct: 29  GKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEW 88

Query: 140 QISQDTANGIFACLANTIGAAESVLRVAATGHDKRLFLKVVASLY 6
           Q+SQDTAN + A LANTIGAAESVLRVAATGHDKRLF+KVV  LY
Sbjct: 89  QVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLY 133


>ref|XP_003529438.1| PREDICTED: reticulon-like protein B22-like [Glycine max]
          Length = 173

 Score =  174 bits (440), Expect = 9e-42
 Identities = 87/106 (82%), Positives = 94/106 (88%)
 Frame = -1

Query: 320 GKTMIGLICGSLVYYHCAFRNSTLVSLLSDVFIVLLCSLAILGLLFRQINISVPVDPLEW 141
           GK +I L+ GSLVYYHCA+RNSTLVSL SDVFIVLLCSLAILGLLFRQ+ I VPVDPLEW
Sbjct: 19  GKAIIALVIGSLVYYHCAYRNSTLVSLFSDVFIVLLCSLAILGLLFRQMGIQVPVDPLEW 78

Query: 140 QISQDTANGIFACLANTIGAAESVLRVAATGHDKRLFLKVVASLYL 3
           QISQ++AN I A LANTIG AESV RVAATGHDKRLFLKV+ SLYL
Sbjct: 79  QISQESANAIVAWLANTIGGAESVFRVAATGHDKRLFLKVILSLYL 124


Top