BLASTX nr result

ID: Bupleurum21_contig00011732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011732
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36634.1| C2H2L domain class transcription factor [Malus x ...    67   1e-09
ref|XP_002315844.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis...    62   5e-08
ref|XP_002311543.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>gb|ADL36634.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 255

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = -2

Query: 257 DKSPG-SNHSTTTSSCLTNPIHPQXXXXXXXXXXXLGFNFSNAEAPKDTQMHDDNTEENA 81
           ++SP  S  STTTSSCLTN  H Q           L F+  + E  K T   + ++E  A
Sbjct: 29  EESPDPSKDSTTTSSCLTNQKHQQQDPRPVSLHLTLQFSSGDTEL-KGTG--ETSSEVAA 85

Query: 80  PHMPSGTMPRVFSCNYCRRKFYSSQA 3
           P    GT+PRVFSCNYC+RKFYSSQA
Sbjct: 86  PPTSEGTIPRVFSCNYCKRKFYSSQA 111


>ref|XP_002315844.1| predicted protein [Populus trichocarpa] gi|222864884|gb|EEF02015.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/80 (50%), Positives = 45/80 (56%)
 Frame = -2

Query: 242 SNHSTTTSSCLTNPIHPQXXXXXXXXXXXLGFNFSNAEAPKDTQMHDDNTEENAPHMPSG 63
           S  STT SS LT+ I  Q           L FN S  E  K T    + + E A H P+ 
Sbjct: 34  SKESTTPSSSLTDLIKIQENPVPVSLDLSLHFNSSEIEL-KGT---GETSSEVAAHAPNT 89

Query: 62  TMPRVFSCNYCRRKFYSSQA 3
           T+PRVFSCNYCRRKFYSSQA
Sbjct: 90  TIPRVFSCNYCRRKFYSSQA 109


>ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis vinifera]
          Length = 246

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
 Frame = -2

Query: 251 SPGSNHSTTTSSCLTNPIHPQXXXXXXXXXXXLGFNFSNAEAPKDTQMHD--DNTEENAP 78
           S  S  STTTSSCLTN I  Q           L FN      P DT++    +++ +   
Sbjct: 31  SDPSKDSTTTSSCLTNLIKLQPDQGSVSLDLTLCFN------PNDTKLKGMGESSSDAVA 84

Query: 77  HMPSGTMPRVFSCNYCRRKFYSSQA 3
             P  T P+VFSCNYCRRKF+SSQA
Sbjct: 85  QAPVATAPKVFSCNYCRRKFFSSQA 109


>ref|XP_002311543.1| predicted protein [Populus trichocarpa] gi|222851363|gb|EEE88910.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/80 (48%), Positives = 45/80 (56%)
 Frame = -2

Query: 242 SNHSTTTSSCLTNPIHPQXXXXXXXXXXXLGFNFSNAEAPKDTQMHDDNTEENAPHMPSG 63
           S  STT SS LT+ +  Q           L FN S  E  K T    + + E A H P+ 
Sbjct: 34  SKDSTTPSSYLTDLVKHQENSVPVSLDLSLHFNSSEIEL-KGT---GETSIEVAAHTPAT 89

Query: 62  TMPRVFSCNYCRRKFYSSQA 3
           T+PRVFSCNYCRRKFYSSQA
Sbjct: 90  TIPRVFSCNYCRRKFYSSQA 109


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