BLASTX nr result

ID: Bupleurum21_contig00011731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011731
         (1570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   202   2e-49
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   200   8e-49
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   195   3e-47
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...   181   5e-43
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...   179   2e-42

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
            gi|223534434|gb|EEF36137.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 393

 Score =  202 bits (515), Expect = 2e-49
 Identities = 145/407 (35%), Positives = 211/407 (51%), Gaps = 8/407 (1%)
 Frame = -1

Query: 1420 VLTLILLRVPWRKLMSLKCVSSKWLSLITSPQFTRLCNIYMLPLRAARASGLFIQRPPIP 1241
            ++T ILLR+P + L+  K VS +WLSLI++P F+ L   + L       S LF++  P+ 
Sbjct: 16   LITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSL---HTLRNPNHTISALFLRNSPLE 72

Query: 1240 EFGRPCPDKVYFLPVDYHLHTTTNPFRIPTFAHDPFDPQRIRILLSCNGLLFCSTCLFAP 1061
                       F  +     ++++       + D F    I+IL SCNGLL CST     
Sbjct: 73   -----------FKFLSLSSSSSSSSSSASPLSFDLF--HGIKILQSCNGLLLCSTLPKIG 119

Query: 1060 REHCIRYIYNPSTNQLAVLPQ----HPAAAHAWVDCIGLAFDPSKSLHYKVIAFVHTSQA 893
            ++    YI NP+T Q+  LP       AA+   +  + LAFDP KS +YKVI    T+ +
Sbjct: 120  QKRNY-YISNPTTKQMFTLPSLVGDANAASPTTLFGLNLAFDPLKSCNYKVICVRSTTNS 178

Query: 892  PSVGDFHIYSSETGTWRVSVQSFHCAPDMLRFHGGVYWHGCIHWLINLHVKRVPDSAVSD 713
                    Y SE   WR+S   F    DM+ F  GV+W+G IHW+          SA  +
Sbjct: 179  IYQYQIETYQSEIAAWRLSGLPFVAPFDMV-FDNGVFWNGAIHWI----------SATGN 227

Query: 712  CLYFNVDEGRIQTFPRPPIAVESTSKRSVYFGESGDHLHFTEVCPY-TTSLRVYEMKSDY 536
             +YF++D   I + P+ P + E   +R  YFGES  HLH  E+    TT   VYEM+ DY
Sbjct: 228  AIYFDMDRECISSMPKLPFSYEWGKRRFRYFGESDGHLHLIEIYGLRTTQFNVYEMEKDY 287

Query: 535  SEWLIKYQIDLAPLSNVFSEMTCHKACLIYGDK--YAVAVLSIIRRENFQEDSFLVLEIP 362
            S W I+Y++ L  +   F EM   ++ L  GD   YA  VLS++  E+  E+S L+L IP
Sbjct: 288  SFWRIRYRVQLDHVVAAFPEMV--RSYLDAGDSNYYAFVVLSLV-EEDATEESSLLLHIP 344

Query: 361  GKAIRYNLVDKSFKVIWDFAVDFGLEQV-DRWAFGRLKVWEYIETLS 224
            GK I YNL +K+FK + + +   G  +  +   FG L  ++YIETL+
Sbjct: 345  GKVISYNLKNKTFKKVCELSYGTGGSRTKESLQFGWLDAYQYIETLA 391


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
            gi|297743579|emb|CBI36446.3| unnamed protein product
            [Vitis vinifera]
          Length = 374

 Score =  200 bits (509), Expect = 8e-49
 Identities = 148/403 (36%), Positives = 202/403 (50%), Gaps = 4/403 (0%)
 Frame = -1

Query: 1420 VLTLILLRVPWRKLMSLKCVSSKWLSLITSPQFTRLCNIYMLPLRAARASGLFIQRPPIP 1241
            +L+ +LLR+P + L+  K VS  WLSLIT P F+R  N+   P+     S LF       
Sbjct: 23   LLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLKPNPV-----SALF------- 70

Query: 1240 EFGRPCPDKVYFLPVDYHLHTTTNPFRIPTFAHDPFDPQRIRILLSCNGLLFCSTCLFAP 1061
                       F+P+D     T+ PF   TF      P+ I IL SCNGL  CS+  +  
Sbjct: 71   ----------SFVPLD--PLQTSAPFTSLTFVD---HPRGIEILQSCNGLFCCSSVDYND 115

Query: 1060 REHCIRYIYNPSTNQLAVLPQHPAAAHAWVDCIGLAFDPSKSLHYKVIAFVHTSQAPSVG 881
             E    YIYNP+T Q   LP     +   V  + LAFDPSKS  YKV+       +    
Sbjct: 116  SERKY-YIYNPTTKQFTTLPPLCGRSVRRVLGVNLAFDPSKSHTYKVVCVQRCKSSYDHC 174

Query: 880  DFHIYSSETGTWRVSVQSFHCAPDMLRFHGGVYWHGCIHWLINLHVKRVPDSAVSDCLYF 701
               I S ETG WRVS   F  AP  + F  GVYW+G IHW+          S     LYF
Sbjct: 175  QIQISSLETGPWRVSGVPF-AAPISVDFPSGVYWNGAIHWI----------SPREASLYF 223

Query: 700  NVDEGRIQTFPRPPIAVESTSKRSVYFGESGDHLHFTEVC-PYTTSLRVYEMKSDYSEWL 524
            +++E  ++  P PP+  +S  +    FGES  HLH  E+    TT   VYEM+ D+S W 
Sbjct: 224  DLNEELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEIYESSTTQFNVYEMERDHSGWF 283

Query: 523  IKYQIDLAPLSNVFSEMT--CHKACLIYGDKYAVAVLSIIRRENFQEDSFLVLEIPGKAI 350
            +K+++DL  ++  F  +    H+    Y   Y+ +VL I+RRE  +EDSFL L IPGK I
Sbjct: 284  VKFRVDLNGVALAFPGIIEGYHEE---YDYMYSFSVLCIVRREK-EEDSFLALHIPGKVI 339

Query: 349  RYNLVDKSFKVI-WDFAVDFGLEQVDRWAFGRLKVWEYIETLS 224
             YN   KS++    D  + FG      W++     ++YIE+LS
Sbjct: 340  GYNFSSKSYQTSDTDCPLAFG------WSY----AFQYIESLS 372


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
            gi|296090309|emb|CBI40128.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  195 bits (495), Expect = 3e-47
 Identities = 151/407 (37%), Positives = 202/407 (49%), Gaps = 8/407 (1%)
 Frame = -1

Query: 1420 VLTLILLRVPWRKLMSLKCVSSKWLSLITSPQFTRLCNIYMLPLRAARASGLFIQRPPIP 1241
            +LT I LR P + L+  + VS +WLSLI+ P F           R AR S   +   P  
Sbjct: 38   LLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCH---------RHARRSSASV---PGV 85

Query: 1240 EFGRPCPDKVYFLPVDYHLHTTTNPFRIPTFAHDPFDPQRIRILLSCNGLLFCSTC--LF 1067
              G P      F+  D     +  P R   F  DP     +++L  CNGLL CST   L 
Sbjct: 86   LLGLP-NSNFDFISFD-EKKASEPPLRSLDFIGDPLG---VKVLQVCNGLLCCSTVRSLG 140

Query: 1066 APREHCIRYIYNPSTNQLAVLPQH-PAAAHAWVDCIGLAFDPSKSLHYKVIAFVHTSQAP 890
              R +   YI N +T + +VLP    +     V  I LAFDPSKS +Y VI       + 
Sbjct: 141  TSRNY---YICNLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSI 197

Query: 889  SVGDFHIYSSETGTWRVSVQSFHCAPDMLRFHGGVYWHGCIHWLINLHVKRVPDSAVSDC 710
            S     IYSS TG WR+S + F    DM+ F+ GV+W+G +HW+          S     
Sbjct: 198  SHYQIEIYSSGTGDWRLSGKPFRAPFDMV-FYDGVFWNGAVHWI----------SPSGAS 246

Query: 709  LYFNVDEGRIQTFPRPPIAVESTSKRSV-YFGESGDHLHFTEVC-PYTTSLRVYEMKSDY 536
            LYF +DEGRI T P PP       KR + +FGESG HLH  E+  P TT   VYEM+ DY
Sbjct: 247  LYFGIDEGRIDTMPPPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEMERDY 306

Query: 535  SEWLIKYQIDLAPLSNVFSEMTCHKACLIYGDKYAVAVLSIIRRENFQEDSFLVLEIPGK 356
            S W +++ +DL  +   F E+T +         YA  VL +IR    +ED  L+L+I GK
Sbjct: 307  SNWGVRFSVDLDKVIAAFPEITQNYLDAHDLYYYAYNVLCLIRGGGNEEDFSLLLQIRGK 366

Query: 355  AIRYNLVDKSFKVIWDFAVDF--GLEQVDRWA-FGRLKVWEYIETLS 224
             I YN+ D SFK ++D A      L  V   +  G L+ + Y+ETL+
Sbjct: 367  IICYNIKDGSFKNVYDVAHGNPPALPPVKASSLIGCLEAYPYMETLT 413


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  181 bits (459), Expect = 5e-43
 Identities = 136/401 (33%), Positives = 196/401 (48%), Gaps = 6/401 (1%)
 Frame = -1

Query: 1408 ILLRVPWRKLMSLKCVSSKWLSLITSPQFTRLCNIYMLPLRAARASGLFIQRPPIPEFGR 1229
            ILLR+P R L+  K VS +WLSLI++P F+    I   P      SG+F        F R
Sbjct: 26   ILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHP--NPTPSGIF--------FPR 75

Query: 1228 PCPDKVYFLPVDYHLHTTTNPFRIPTFAHDPFDPQRIRILLSCNGLLFCSTC--LFAPRE 1055
            P P    F  +++  + +  PF  P FA    D     IL SCNGL  CST    ++ R+
Sbjct: 76   PTPKSPPFDFINFTTNPSRPPFESPHFAD---DKHGFLILQSCNGLFLCSTYNGNYSTRD 132

Query: 1054 HCIRYIYNPSTNQLAVLPQHPAAAHAWVDCIGLAFDPSKSLHYKVIAFVHTSQAPSVGDF 875
                YI+NP+TN    LP     A   V  + LAFDP +S  YKVI   ++         
Sbjct: 133  F---YIHNPTTNHHTKLPYLQVGA---VFGLNLAFDPLRSSDYKVICVRYSDAYTDTFQI 186

Query: 874  HIYSSETGTWRVSVQSFHCAPDMLRFHGGVYWHGCIHWLINLHVKRVPDSAVSDCLYFNV 695
             +YSS TG WR  VQ    AP  +RF  GVYW+  +HW+          S   + LYF++
Sbjct: 187  EMYSSVTGPWR-PVQGVFSAPLSVRFDSGVYWNNAVHWI----------STSENSLYFDL 235

Query: 694  DEGRIQTFPRPPIAVESTSKRSVYFGESGDHLHFTEVC-PYTTSLRVYEMKSDYSEWLIK 518
             E ++   P P +      +R  YFG  G +LH  E+       L VY+M+ D+  W ++
Sbjct: 236  REEKVHDLPMPGVPDGQEQRRVKYFGTCGGNLHLIEIYEAQEMELNVYQMQDDHCGWFVR 295

Query: 517  YQIDLAPLSNVFSEMTCHK--ACLIYGDKYAVAVLSIIRRENFQEDSFLVLEIPGKAIRY 344
            Y++DL  +S VF EM   +  A L    K++VA +     E  +E S +VLE+ GK +R 
Sbjct: 296  YRVDLRGVSVVFPEMIPSEDDADLGLFPKFSVAAVV----EGIEEAS-VVLEVDGKIVRV 350

Query: 343  NLVDKSFKVIWDFAVDFGLEQVD-RWAFGRLKVWEYIETLS 224
            N+    F+ + +        Q+     FGR+  + YIE+L+
Sbjct: 351  NVESGRFERLGEIEKGGCSSQLPLAVGFGRIDAFLYIESLA 391


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  179 bits (453), Expect = 2e-42
 Identities = 135/401 (33%), Positives = 196/401 (48%), Gaps = 6/401 (1%)
 Frame = -1

Query: 1408 ILLRVPWRKLMSLKCVSSKWLSLITSPQFTRLCNIYMLPLRAARASGLFIQRPPIPEFGR 1229
            ILLR+P R L+  K VS +WLSLI++P F+    I   P      SG+F        F R
Sbjct: 26   ILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHP--NPTPSGIF--------FPR 75

Query: 1228 PCPDKVYFLPVDYHLHTTTNPFRIPTFAHDPFDPQRIRILLSCNGLLFCSTC--LFAPRE 1055
            P P    F  +++  + +  PF  P FA    D     IL SCNGL  CST    ++ R+
Sbjct: 76   PTPKSPPFDFINFTTNPSRPPFESPHFAD---DKHGFLILQSCNGLFLCSTYNGNYSTRD 132

Query: 1054 HCIRYIYNPSTNQLAVLPQHPAAAHAWVDCIGLAFDPSKSLHYKVIAFVHTSQAPSVGDF 875
                YI+NP+TN    LP     A   V  + LAFDP +S  YKVI   ++         
Sbjct: 133  F---YIHNPTTNHHTKLPYLQVGA---VFGLNLAFDPLRSSDYKVICVRYSDAYTDTFQI 186

Query: 874  HIYSSETGTWRVSVQSFHCAPDMLRFHGGVYWHGCIHWLINLHVKRVPDSAVSDCLYFNV 695
             +YSS TG WR  VQ    AP  +RF  GVYW+  +HW+          S   + LYF++
Sbjct: 187  EMYSSVTGPWR-PVQGVFSAPLSMRFDSGVYWNNAVHWI----------STSENSLYFDL 235

Query: 694  DEGRIQTFPRPPIAVESTSKRSVYFGESGDHLHFTEVC-PYTTSLRVYEMKSDYSEWLIK 518
             E ++   P P +      +R  YFG  G +L+  E+       L VY+M+ D+  W ++
Sbjct: 236  REEKVHDLPMPGVPDGQEQRRVKYFGTCGGNLNLIEIYEAQEMELNVYQMQDDHCGWFVR 295

Query: 517  YQIDLAPLSNVFSEMTCHK--ACLIYGDKYAVAVLSIIRRENFQEDSFLVLEIPGKAIRY 344
            Y++DL  +S VF EM   +  A L    K++VA +     E  +E S +VLE+ GK +R 
Sbjct: 296  YRVDLRGVSVVFPEMIPSEDDADLGLFPKFSVAAVV----EGIEEAS-VVLEVDGKIVRV 350

Query: 343  NLVDKSFKVIWDFAVDFGLEQVD-RWAFGRLKVWEYIETLS 224
            N+    F+ + +        Q+     FGR+  + YIE+L+
Sbjct: 351  NVESGRFERLGEIEKGGCSSQLPLAVGFGRIDAFLYIESLA 391


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