BLASTX nr result

ID: Bupleurum21_contig00011730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011730
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54
ref|XP_002526452.1| yth domain-containing protein, putative [Ric...   213   3e-53
emb|CBI29706.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249...   207   2e-51
emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera]   199   4e-49

>ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|222839074|gb|EEE77425.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  217 bits (552), Expect = 3e-54
 Identities = 108/195 (55%), Positives = 141/195 (72%), Gaps = 2/195 (1%)
 Frame = -3

Query: 764 IKSEAGSVCPIFLFYSVNASGQFVGLAEMIGKVDYAKNMDFWQRDKWNGFFPVKWHIIKD 585
           + SE G+ CPIFLF+SVN SGQFVGLAEM+G+VD+ K+MDFWQ DKWNGFFPVKWH+IKD
Sbjct: 148 VSSETGTKCPIFLFFSVNGSGQFVGLAEMVGQVDFNKDMDFWQIDKWNGFFPVKWHVIKD 207

Query: 584 IPNTKLRHIIIESNENKPVTESRDAQEIGLQQGLEMLKIFKSYSAVTSVLDDFDFYKNRE 405
           IPN +LRHI++E+N+   VT SRD QEIGL++GLEML IFKSYSA TS+LDDF+FY+NRE
Sbjct: 208 IPNGQLRHIVLENNDGHSVTFSRDTQEIGLEKGLEMLNIFKSYSAKTSMLDDFNFYENRE 267

Query: 404 QSLKTTRNNLPAA-EPKMYMQHDYPKHQRAGIRTTR-GSTNNNSSDLSAITRQTKKITLM 231
           +SL T ++N PA    +++   D+PKH  A  + +   S    +++ S +   TK ++L 
Sbjct: 268 KSLNTKKSNKPATLRMEIFENSDFPKHTAAEEKISEDDSRAKKTTNPSTLINLTKNLSL- 326

Query: 230 *TGQTNKEGLKNKRI 186
             G   K     K I
Sbjct: 327 -NGHNQKSNSVKKPI 340


>ref|XP_002526452.1| yth domain-containing protein, putative [Ricinus communis]
           gi|223534232|gb|EEF35947.1| yth domain-containing
           protein, putative [Ricinus communis]
          Length = 582

 Score =  213 bits (543), Expect = 3e-53
 Identities = 101/176 (57%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
 Frame = -3

Query: 758 SEAGSVCPIFLFYSVNASGQFVGLAEMIGKVDYAKNMDFWQRDKWNGFFPVKWHIIKDIP 579
           SE G+ CPIFLF+SVN SGQFVGLAEM+G+VD+ K+MDFWQ DKW+GFFPVKWH+IKDIP
Sbjct: 383 SETGTKCPIFLFFSVNGSGQFVGLAEMVGQVDFEKDMDFWQLDKWSGFFPVKWHVIKDIP 442

Query: 578 NTKLRHIIIESNENKPVTESRDAQEIGLQQGLEMLKIFKSYSAVTSVLDDFDFYKNREQS 399
           N +LRHII+E+N+ +PVT SRD QEIG +QGLEML IFK YS+  S+LDDF+FY+NRE S
Sbjct: 443 NNQLRHIILENNDKRPVTFSRDTQEIGFEQGLEMLNIFKGYSSKASLLDDFNFYENRETS 502

Query: 398 LKTTRNNLPAAEPKMYMQHDYPKHQRAGIRT-TRGSTNNNSSDLSAITRQTKKITL 234
           +    N L     ++    D+PKH ++G R     S    +S+ S++   TK ++L
Sbjct: 503 VDRKSNKLATLRMEINNNGDFPKHPKSGERKHEEESWTKKTSNPSSLINLTKNLSL 558


>emb|CBI29706.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  207 bits (527), Expect = 2e-51
 Identities = 102/179 (56%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
 Frame = -3

Query: 758  SEAGSVCPIFLFYSVNASGQFVGLAEMIGKVDYAKNMDFWQRDKWNGFFPVKWHIIKDIP 579
            +E G+  PIFLF+SVN SGQFVG+AEM+G+VD+ K+MDFWQ DKWNGFFPVKWHI+KDIP
Sbjct: 500  NETGTKFPIFLFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIP 559

Query: 578  NTKLRHIIIESNENKPVTESRDAQEIGLQQGLEMLKIFKSYSAVTSVLDDFDFYKNREQS 399
            N++LRHI +ESNEN+ VT +RD QEIGL+QG+EMLKIFK+YSA TS+ DDF+FY+NRE+S
Sbjct: 560  NSQLRHITLESNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKS 619

Query: 398  LKTTRNNLPAAEPKMYMQ---HDYPKHQRAGIR-TTRGSTNNNSSDLSAITRQTKKITL 234
            L   R++ P    +M +     D PKH     R T   +  + S D  ++   TK ++L
Sbjct: 620  LHARRSSKPPPPSQMEIYGSGDDLPKHLHGEERKTEEPARTSRSHDPKSLINLTKNLSL 678


>ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249242 [Vitis vinifera]
          Length = 608

 Score =  207 bits (527), Expect = 2e-51
 Identities = 102/179 (56%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
 Frame = -3

Query: 758 SEAGSVCPIFLFYSVNASGQFVGLAEMIGKVDYAKNMDFWQRDKWNGFFPVKWHIIKDIP 579
           +E G+  PIFLF+SVN SGQFVG+AEM+G+VD+ K+MDFWQ DKWNGFFPVKWHI+KDIP
Sbjct: 400 NETGTKFPIFLFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIP 459

Query: 578 NTKLRHIIIESNENKPVTESRDAQEIGLQQGLEMLKIFKSYSAVTSVLDDFDFYKNREQS 399
           N++LRHI +ESNEN+ VT +RD QEIGL+QG+EMLKIFK+YSA TS+ DDF+FY+NRE+S
Sbjct: 460 NSQLRHITLESNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKS 519

Query: 398 LKTTRNNLPAAEPKMYMQ---HDYPKHQRAGIR-TTRGSTNNNSSDLSAITRQTKKITL 234
           L   R++ P    +M +     D PKH     R T   +  + S D  ++   TK ++L
Sbjct: 520 LHARRSSKPPPPSQMEIYGSGDDLPKHLHGEERKTEEPARTSRSHDPKSLINLTKNLSL 578


>emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera]
          Length = 812

 Score =  199 bits (507), Expect = 4e-49
 Identities = 91/135 (67%), Positives = 115/135 (85%)
 Frame = -3

Query: 758 SEAGSVCPIFLFYSVNASGQFVGLAEMIGKVDYAKNMDFWQRDKWNGFFPVKWHIIKDIP 579
           +E G+  PIFLF+SVN SGQFVG+AEM+G+VD+ K+MDFWQ DKWNGFFPVKWHI+KDIP
Sbjct: 403 NETGTKFPIFLFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIP 462

Query: 578 NTKLRHIIIESNENKPVTESRDAQEIGLQQGLEMLKIFKSYSAVTSVLDDFDFYKNREQS 399
           N++LRHI +ESNEN+ VT +RD QEIGL+QG+EMLKIFK+YSA TS+ DDF+FY+NRE+S
Sbjct: 463 NSQLRHITLESNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKS 522

Query: 398 LKTTRNNLPAAEPKM 354
           L   R++ P    +M
Sbjct: 523 LHARRSSKPPPPSQM 537


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