BLASTX nr result

ID: Bupleurum21_contig00011728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011728
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P85200.1|PRS6B_HELAN RecName: Full=26S protease regulatory su...   149   3e-34
gb|ADE75925.1| unknown [Picea sitchensis]                             147   1e-33
gb|ACA58350.1| putative 26S proteasome regulatory complex protei...   147   1e-33
sp|P54778.1|PRS6B_SOLTU RecName: Full=26S protease regulatory su...   145   3e-33
gb|AFK43608.1| unknown [Medicago truncatula]                          145   3e-33

>sp|P85200.1|PRS6B_HELAN RecName: Full=26S protease regulatory subunit 6B homolog
          Length = 414

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/71 (100%), Positives = 71/71 (100%)
 Frame = +2

Query: 2   CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 181
           CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV
Sbjct: 344 CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 403

Query: 182 KKPDTDFDFYK 214
           KKPDTDFDFYK
Sbjct: 404 KKPDTDFDFYK 414


>gb|ADE75925.1| unknown [Picea sitchensis]
          Length = 214

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = +2

Query: 2   CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 181
           CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYR NV
Sbjct: 144 CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRANV 203

Query: 182 KKPDTDFDFYK 214
           KKPDTDFDFYK
Sbjct: 204 KKPDTDFDFYK 214


>gb|ACA58350.1| putative 26S proteasome regulatory complex protein [Sandersonia
           aurantiaca]
          Length = 71

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = +2

Query: 2   CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 181
           CTAKMNLSDEVDLEDYVSRPDKISAAEI AICQEAGMHAVRKNRYVILPKDFEKGYRTNV
Sbjct: 1   CTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 60

Query: 182 KKPDTDFDFYK 214
           KKPDTDFDFYK
Sbjct: 61  KKPDTDFDFYK 71


>sp|P54778.1|PRS6B_SOLTU RecName: Full=26S protease regulatory subunit 6B homolog
           gi|1155334|gb|AAB67835.1| POTATP1 [Solanum tuberosum]
          Length = 413

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = +2

Query: 2   CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 181
           CTAKMNL DEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV
Sbjct: 343 CTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 402

Query: 182 KKPDTDFDFYK 214
           KKPDTDF+FYK
Sbjct: 403 KKPDTDFEFYK 413


>gb|AFK43608.1| unknown [Medicago truncatula]
          Length = 415

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/71 (97%), Positives = 71/71 (100%)
 Frame = +2

Query: 2   CTAKMNLSDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 181
           CTAKMNLSDEVDLEDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNV
Sbjct: 345 CTAKMNLSDEVDLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 404

Query: 182 KKPDTDFDFYK 214
           KKPDTDF+FYK
Sbjct: 405 KKPDTDFEFYK 415


Top