BLASTX nr result

ID: Bupleurum21_contig00011707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011707
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...    77   1e-27
ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...    72   5e-25
ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-24
ref|NP_567005.2| F-box/LRR-repeat protein 17 [Arabidopsis thalia...    72   7e-24
emb|CAB77585.1| putative protein [Arabidopsis thaliana]                72   7e-24

>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
           gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
           protein, putative [Ricinus communis]
          Length = 586

 Score = 77.0 bits (188), Expect(2) = 1e-27
 Identities = 32/51 (62%), Positives = 44/51 (86%)
 Frame = +1

Query: 1   EVMKRLAPQELLEAAKVCRGWRDASKRIWKATEELRLRVPVKSRLGFAGSV 153
           EV++RL P  LL AA+VC+GWRD ++R+W+A EELRLRVP++++LGF GSV
Sbjct: 133 EVLRRLPPAGLLAAARVCKGWRDTARRLWRAAEELRLRVPIRAQLGFVGSV 183



 Score = 71.2 bits (173), Expect(2) = 1e-27
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +2

Query: 275 LTLRMESDVDATMLACIAFLCPNLQSLEIFTSHNSVNRITGDEL 406
           L+LRMESDVDATMLACIAF CPNL+ +EI TS  +VNRI+GDEL
Sbjct: 193 LSLRMESDVDATMLACIAFSCPNLECMEISTSDTAVNRISGDEL 236


>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
           gi|297735494|emb|CBI17934.3| unnamed protein product
           [Vitis vinifera]
          Length = 574

 Score = 72.4 bits (176), Expect(2) = 5e-25
 Identities = 29/51 (56%), Positives = 43/51 (84%)
 Frame = +1

Query: 1   EVMKRLAPQELLEAAKVCRGWRDASKRIWKATEELRLRVPVKSRLGFAGSV 153
           EVM+RL P  +L AA+VC+GWR+ ++R+W++ EELRLRVP ++++GF GSV
Sbjct: 121 EVMRRLPPAAMLAAAQVCKGWRETARRLWRSAEELRLRVPARAQVGFVGSV 171



 Score = 67.0 bits (162), Expect(2) = 5e-25
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = +2

Query: 275 LTLRMESDVDATMLACIAFLCPNLQSLEIFTSHNSVNRITGDEL 406
           L+LRMES VDATMLACIAF CPNL+ +EI T+  ++NRITGDEL
Sbjct: 181 LSLRMESVVDATMLACIAFSCPNLEHMEISTAVTAINRITGDEL 224


>ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|222842529|gb|EEE80076.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 69.3 bits (168), Expect(2) = 2e-24
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +1

Query: 1   EVMKRLAPQELLEAAKVCRGWRDASKRIWKATEELRLRVPVKSRLGFAGSV 153
           E+++RL P  LL A  VC+GWR+ ++R+W+A EELRLRVP +S+ GF GSV
Sbjct: 132 EILRRLPPAGLLAAGSVCKGWRETARRLWRAAEELRLRVPPRSQPGFVGSV 182



 Score = 68.2 bits (165), Expect(2) = 2e-24
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +2

Query: 275 LTLRMESDVDATMLACIAFLCPNLQSLEIFTSHNSVNRITGDEL 406
           L LR+ESD+D+TM ACIAF CPNL+++EI TS  +VNRITGDEL
Sbjct: 192 LNLRLESDLDSTMFACIAFSCPNLEAVEISTSETAVNRITGDEL 235


>ref|NP_567005.2| F-box/LRR-repeat protein 17 [Arabidopsis thaliana]
           gi|75331246|sp|Q8W104.1|FBL17_ARATH RecName:
           Full=F-box/LRR-repeat protein 17; AltName:
           Full=F-box-like protein 17
           gi|18087570|gb|AAL58916.1|AF462827_1 AT3g54650/T5N23_10
           [Arabidopsis thaliana] gi|22655356|gb|AAM98270.1|
           At3g54650/T5N23_10 [Arabidopsis thaliana]
           gi|332645740|gb|AEE79261.1| F-box/LRR-repeat protein 17
           [Arabidopsis thaliana]
          Length = 593

 Score = 72.0 bits (175), Expect(2) = 7e-24
 Identities = 29/51 (56%), Positives = 43/51 (84%)
 Frame = +1

Query: 1   EVMKRLAPQELLEAAKVCRGWRDASKRIWKATEELRLRVPVKSRLGFAGSV 153
           EV+KRL P  LL AA+VC+GWR+ S+++WKA EELR+RVP ++++G+ GS+
Sbjct: 142 EVLKRLPPSSLLMAARVCKGWRETSRKMWKAAEELRIRVPERAQIGYIGSL 192



 Score = 63.5 bits (153), Expect(2) = 7e-24
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 275 LTLRMESDVDATMLACIAFLCPNLQSLEIFTSHNSVNRITGDEL 406
           L+L++ESD DAT LACIAF CPNL+ LEI TS  +VNRI+GDEL
Sbjct: 202 LSLKIESDFDATTLACIAFSCPNLEVLEITTSGAAVNRISGDEL 245


>emb|CAB77585.1| putative protein [Arabidopsis thaliana]
          Length = 538

 Score = 72.0 bits (175), Expect(2) = 7e-24
 Identities = 29/51 (56%), Positives = 43/51 (84%)
 Frame = +1

Query: 1   EVMKRLAPQELLEAAKVCRGWRDASKRIWKATEELRLRVPVKSRLGFAGSV 153
           EV+KRL P  LL AA+VC+GWR+ S+++WKA EELR+RVP ++++G+ GS+
Sbjct: 142 EVLKRLPPSSLLMAARVCKGWRETSRKMWKAAEELRIRVPERAQIGYIGSL 192



 Score = 63.5 bits (153), Expect(2) = 7e-24
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 275 LTLRMESDVDATMLACIAFLCPNLQSLEIFTSHNSVNRITGDEL 406
           L+L++ESD DAT LACIAF CPNL+ LEI TS  +VNRI+GDEL
Sbjct: 202 LSLKIESDFDATTLACIAFSCPNLEVLEITTSGAAVNRISGDEL 245


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