BLASTX nr result

ID: Bupleurum21_contig00011695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011695
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   572   e-161
ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|2...   544   e-152
ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus ...   531   e-148
ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|2...   519   e-145
ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   507   e-141

>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score =  572 bits (1475), Expect = e-161
 Identities = 279/418 (66%), Positives = 343/418 (82%)
 Frame = -3

Query: 1278 TDCISLISDENLLCVLSKLPQSQIIQSGLVCKRWERLSGRLVKSLKLLDWEFLESGRLVF 1099
            TD  SL+SD+ LL +LSKLP S    + LVCKRW  L GRLV+S+KL+DW+FLESGRL+ 
Sbjct: 55   TDPFSLLSDQLLLHILSKLPYSHHTTTSLVCKRWMHLHGRLVQSVKLVDWDFLESGRLIC 114

Query: 1098 RFPNLIDVDIVRASVRNTHNTGILLSNRLVSVQLNSGVLNDGFVRKLDLLDSGLIDQGIR 919
            RFPNL D+D+VRA VR  +N+ I LS++ +S+QL+S  L+ GFV   DLL   +ID+G+R
Sbjct: 115  RFPNLTDIDLVRACVRLPNNSAIWLSHKFLSIQLDSRFLSGGFVSGDDLLPPDVIDEGLR 174

Query: 918  VLVEGCSSLRKLVLINASEEGLTTVAVVCKTLQELELYCCSDFVLSGIAACQNLQILKLV 739
            ++ EGC +LRKLVLI ASE+GL++VA  C TLQELEL+ C+D  L GI+ CQNLQILKL+
Sbjct: 175  IVAEGCPNLRKLVLIGASEKGLSSVATECLTLQELELHYCTDLSLRGISGCQNLQILKLI 234

Query: 738  GCIDGFYDSVISDIGLTILAQGCRRLVKLELVGCEGSFDGIKAVGQCCQMLEELTLSDHR 559
            G +   Y+SVISDIGLTILAQGCRRLVKLEL GCEGS+DGIKA+GQCCQMLEELTL DHR
Sbjct: 235  GSVRELYNSVISDIGLTILAQGCRRLVKLELCGCEGSYDGIKAIGQCCQMLEELTLCDHR 294

Query: 558  MDGGWLAALSYCGNLKTLKLQSCKSIDSCPGPDEHLSYCPTLEELYLQQCQLRDKHGVRS 379
            MDGGWL+ALS+CGNLKTLKLQSCKSID+ PG D+HL  CPTLE L+LQ+CQ+RDK   R+
Sbjct: 295  MDGGWLSALSFCGNLKTLKLQSCKSIDASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRA 354

Query: 378  LFVACQTIRDLVIEDCWGLDNITFANASICRRVRLLSLEGCSLLTMEGLEPVVLFWKELN 199
            LF+ C+ +R++V++DCWGL++ TF  A+ICRR++ LSLEGCSLLT+EGL+ VV  WKEL 
Sbjct: 355  LFLVCEAVREIVLQDCWGLEDETFGIATICRRLKSLSLEGCSLLTVEGLDSVVHSWKELQ 414

Query: 198  RLKVVSCNNIKDVEITSELATLFSSLKELKWRPDSRSVLLSGLEGTGVGQKGGRSFYR 25
            RL+VVSCNNIKD E+T  LATLFS LKELKWRPDSRS+L S L  TG+G+KGG+ F R
Sbjct: 415  RLRVVSCNNIKDSEVTPALATLFSVLKELKWRPDSRSLLSSSLGETGMGKKGGKFFKR 472


>ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|222844242|gb|EEE81789.1|
            predicted protein [Populus trichocarpa]
          Length = 450

 Score =  544 bits (1401), Expect = e-152
 Identities = 266/442 (60%), Positives = 343/442 (77%)
 Frame = -3

Query: 1356 TPPTEFDETLVLNQVDNPGFSRVSSGTDCISLISDENLLCVLSKLPQSQIIQSGLVCKRW 1177
            +PP++ D+   L   D        +  D  SL+SDE LL V +K+P SQ + + LVCKRW
Sbjct: 11   SPPSDPDKIFGLPSND-------PTRPDYTSLLSDELLLQVFNKVPISQYVSNSLVCKRW 63

Query: 1176 ERLSGRLVKSLKLLDWEFLESGRLVFRFPNLIDVDIVRASVRNTHNTGILLSNRLVSVQL 997
              L GRLV S++++D+ F+ SGR+  RFPNL ++DIV A ++   N+GIL++   +SV +
Sbjct: 64   FFLHGRLVHSIRVIDFGFVNSGRVFTRFPNLENIDIVHACIKMPRNSGILITRNNLSVYV 123

Query: 996  NSGVLNDGFVRKLDLLDSGLIDQGIRVLVEGCSSLRKLVLINASEEGLTTVAVVCKTLQE 817
             + +L+ GF+ + DLL S LID G++++ +   +LR++V+   SE GL +V+  C+ LQE
Sbjct: 124  GTKLLSGGFIEENDLLSSDLIDNGLQLISKSYPNLRRIVVFGTSENGLLSVSSKCEMLQE 183

Query: 816  LELYCCSDFVLSGIAACQNLQILKLVGCIDGFYDSVISDIGLTILAQGCRRLVKLELVGC 637
            LEL+CC D  L GI+ C+NLQ+LKL+GC+DGFY+SV+SDIGLTILAQGCRRLVKLEL GC
Sbjct: 184  LELHCCGDMSLKGISGCRNLQVLKLIGCVDGFYNSVVSDIGLTILAQGCRRLVKLELCGC 243

Query: 636  EGSFDGIKAVGQCCQMLEELTLSDHRMDGGWLAALSYCGNLKTLKLQSCKSIDSCPGPDE 457
            EGS+DGIKA+GQCCQMLEELT+ DHRMDGGWLAALS+C NLKTL+LQSCKS+DS PG  E
Sbjct: 244  EGSYDGIKAIGQCCQMLEELTICDHRMDGGWLAALSFCENLKTLRLQSCKSVDSSPGLLE 303

Query: 456  HLSYCPTLEELYLQQCQLRDKHGVRSLFVACQTIRDLVIEDCWGLDNITFANASICRRVR 277
            HL  CPTLEEL++Q+CQ+RDK  V++LF+ C+T+R++V+++CW L++  FA AS+CRRVR
Sbjct: 304  HLGSCPTLEELHVQRCQMRDKQAVKALFLVCKTVREIVLQNCWRLEDEVFAAASVCRRVR 363

Query: 276  LLSLEGCSLLTMEGLEPVVLFWKELNRLKVVSCNNIKDVEITSELATLFSSLKELKWRPD 97
            LLSLEGCSLLT  GLE V+L WKEL RL V S NNIKD EIT +LATLFS LKELKWRPD
Sbjct: 364  LLSLEGCSLLTTGGLESVILNWKELQRLTVTSSNNIKDSEITPDLATLFSVLKELKWRPD 423

Query: 96   SRSVLLSGLEGTGVGQKGGRSF 31
            SRS+L SGL GTGVG KGGR F
Sbjct: 424  SRSLLSSGLAGTGVGNKGGRFF 445


>ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223548826|gb|EEF50315.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 459

 Score =  531 bits (1369), Expect = e-148
 Identities = 254/416 (61%), Positives = 326/416 (78%), Gaps = 1/416 (0%)
 Frame = -3

Query: 1275 DCISLISDENLLCVLSKLPQSQIIQSGLVCKRWERLSGRLVKSLKLLDWEFLESGRLVFR 1096
            D  SL+SDE LL V SKLP SQ + + L CKRW  L GRLV+S+KL +W FL SGR+  R
Sbjct: 39   DYTSLLSDELLLQVFSKLPISQYVSNSLACKRWLHLHGRLVQSIKLNEWSFLNSGRIFTR 98

Query: 1095 FPNLIDVDIVRASVRNTHNTGILLSNRLVSVQLNSGVLNDG-FVRKLDLLDSGLIDQGIR 919
            F N+ ++ I+ A      N+GI+L+++ +S+ + +   ++G F+ +  +L    ID G+ 
Sbjct: 99   FRNITEISILNACFITPRNSGIMLTHKFLSIDIGTEFSDNGLFIEENCMLPCDFIDCGLE 158

Query: 918  VLVEGCSSLRKLVLINASEEGLTTVAVVCKTLQELELYCCSDFVLSGIAACQNLQILKLV 739
            ++ +   +LR++V+  ASE GL +++  C+TLQE+EL+CC DF L GI+ C NLQ++KLV
Sbjct: 159  MIAKSYPNLRRIVVFGASETGLLSISNKCETLQEVELHCCGDFALKGISGCTNLQVVKLV 218

Query: 738  GCIDGFYDSVISDIGLTILAQGCRRLVKLELVGCEGSFDGIKAVGQCCQMLEELTLSDHR 559
            GC+D FY SV+SDIGLTILAQGC+RLVKLEL GCEGS+DGIKA+GQCCQMLEELT+SDHR
Sbjct: 219  GCVDVFYYSVVSDIGLTILAQGCKRLVKLELCGCEGSYDGIKAIGQCCQMLEELTISDHR 278

Query: 558  MDGGWLAALSYCGNLKTLKLQSCKSIDSCPGPDEHLSYCPTLEELYLQQCQLRDKHGVRS 379
            MDGGWLAALS+CGNLKTL L++CKSIDS PGPDEHL  CPTLEEL+LQQCQ+RDK GV++
Sbjct: 279  MDGGWLAALSFCGNLKTLTLKTCKSIDSSPGPDEHLGSCPTLEELHLQQCQMRDKLGVKA 338

Query: 378  LFVACQTIRDLVIEDCWGLDNITFANASICRRVRLLSLEGCSLLTMEGLEPVVLFWKELN 199
            LF  C+ +R++V ++CWGL++  F+ AS+CRRVRLLSLEGCS LT  GLE V+L WKEL 
Sbjct: 339  LFSVCEAVREIVFQNCWGLEDEVFSTASVCRRVRLLSLEGCSSLTTGGLEAVILNWKELQ 398

Query: 198  RLKVVSCNNIKDVEITSELATLFSSLKELKWRPDSRSVLLSGLEGTGVGQKGGRSF 31
            RL+V+SCN IKD E++  LA+LFS LKELKWRPDSRS+L S L GTGVG KGGR F
Sbjct: 399  RLRVMSCNKIKDNEVSPALASLFSVLKELKWRPDSRSLLSSSLAGTGVGNKGGRFF 454


>ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|222835133|gb|EEE73568.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  519 bits (1336), Expect = e-145
 Identities = 244/390 (62%), Positives = 313/390 (80%)
 Frame = -3

Query: 1200 SGLVCKRWERLSGRLVKSLKLLDWEFLESGRLVFRFPNLIDVDIVRASVRNTHNTGILLS 1021
            + LVCKRW  + GRLV+S+K++D+ F+ SGR+  RFPNL ++DI  A ++   N+GIL++
Sbjct: 19   NSLVCKRWLFIHGRLVQSIKVIDFRFVNSGRVFTRFPNLENIDIAHACIKMPRNSGILIT 78

Query: 1020 NRLVSVQLNSGVLNDGFVRKLDLLDSGLIDQGIRVLVEGCSSLRKLVLINASEEGLTTVA 841
                SV + + +L+D F+ + DLL S LID G+ ++ +   +LR++ +  +SE GL  V+
Sbjct: 79   RNNSSVYIGTKLLSDVFIEESDLLSSDLIDNGLELISKWYPNLRRIAVFGSSENGLLCVS 138

Query: 840  VVCKTLQELELYCCSDFVLSGIAACQNLQILKLVGCIDGFYDSVISDIGLTILAQGCRRL 661
              CK LQELEL+CC D  L GI+ C+NLQ+LKL+GC+DGF++S++SDIGLTILAQGCRRL
Sbjct: 139  SKCKMLQELELHCCGDMSLKGISGCRNLQVLKLIGCVDGFFNSMVSDIGLTILAQGCRRL 198

Query: 660  VKLELVGCEGSFDGIKAVGQCCQMLEELTLSDHRMDGGWLAALSYCGNLKTLKLQSCKSI 481
            VKLEL GCEGS+DGIKA+GQCCQMLEELT+ DHRMDGGWLAAL +C NLKTL+LQSCKSI
Sbjct: 199  VKLELCGCEGSYDGIKAIGQCCQMLEELTIRDHRMDGGWLAALLFCENLKTLRLQSCKSI 258

Query: 480  DSCPGPDEHLSYCPTLEELYLQQCQLRDKHGVRSLFVACQTIRDLVIEDCWGLDNITFAN 301
            DS PG  EHL  CPTLEEL+LQQCQ+RDK  V++LF+ C+T+R++V+++CWGL++  FA 
Sbjct: 259  DSSPGLPEHLGSCPTLEELHLQQCQMRDKQAVKALFLICKTVREIVLQNCWGLEDEVFAT 318

Query: 300  ASICRRVRLLSLEGCSLLTMEGLEPVVLFWKELNRLKVVSCNNIKDVEITSELATLFSSL 121
            A++CRR RLLSLEGCSLLT   LE V+L WKEL RL V+SCNNIKD EIT +LATLFS L
Sbjct: 319  ATVCRRARLLSLEGCSLLTTGCLESVILNWKELERLTVISCNNIKDSEITPDLATLFSVL 378

Query: 120  KELKWRPDSRSVLLSGLEGTGVGQKGGRSF 31
            KELKWRPDS+S+L +GL GTGVG KGGR F
Sbjct: 379  KELKWRPDSKSLLSAGLAGTGVGNKGGRFF 408


>ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 478

 Score =  507 bits (1306), Expect = e-141
 Identities = 253/414 (61%), Positives = 319/414 (77%)
 Frame = -3

Query: 1263 LISDENLLCVLSKLPQSQIIQSGLVCKRWERLSGRLVKSLKLLDWEFLESGRLVFRFPNL 1084
            L+SDE LL V  KLP+SQ   + LVCKRW  L GRLV+S+KLL+W+FLESGRLV RFPNL
Sbjct: 65   LLSDELLLRVFQKLPESQRKPNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSRFPNL 124

Query: 1083 IDVDIVRASVRNTHNTGILLSNRLVSVQLNSGVLNDGFVRKLDLLDSGLIDQGIRVLVEG 904
              VD+V A +    + G+LL++R+VSV ++S V  +GF+    +L S ++D+G+R L  G
Sbjct: 125  TRVDLVHACIVWPRSCGVLLNHRVVSVPVDSEVSQNGFLENGKVLASNVVDRGLRFLASG 184

Query: 903  CSSLRKLVLINASEEGLTTVAVVCKTLQELELYCCSDFVLSGIAACQNLQILKLVGCIDG 724
              +LRKL ++ ASE GL +VA  C TLQELEL+ CSD  L  I+   NLQILKL+G  +G
Sbjct: 185  YPNLRKLAVVGASELGLLSVAEECSTLQELELHKCSDATLRAISGFGNLQILKLIGNAEG 244

Query: 723  FYDSVISDIGLTILAQGCRRLVKLELVGCEGSFDGIKAVGQCCQMLEELTLSDHRMDGGW 544
             Y S++SD+GLTILAQGC RLVKLEL GCEGS+DGIKA+GQCCQMLEELTLSDHR+DGGW
Sbjct: 245  LYKSLVSDVGLTILAQGCTRLVKLELSGCEGSYDGIKAIGQCCQMLEELTLSDHRLDGGW 304

Query: 543  LAALSYCGNLKTLKLQSCKSIDSCPGPDEHLSYCPTLEELYLQQCQLRDKHGVRSLFVAC 364
            L+ALSYC NLKTL+ QSC+ ID CPG DE+L  CPTLE L+L +CQLRDK  +R+L++  
Sbjct: 305  LSALSYCENLKTLRFQSCRRIDVCPGLDEYLGSCPTLERLHLHKCQLRDKLSMRALYMIS 364

Query: 363  QTIRDLVIEDCWGLDNITFANASICRRVRLLSLEGCSLLTMEGLEPVVLFWKELNRLKVV 184
              +RD VI+DCWGLDN     A+ CRRV+LLSLEGCSLLT EGLE  VL WK+L +L+VV
Sbjct: 365  GAVRDFVIQDCWGLDNDILGLATTCRRVKLLSLEGCSLLTTEGLESAVLSWKDLQKLRVV 424

Query: 183  SCNNIKDVEITSELATLFSSLKELKWRPDSRSVLLSGLEGTGVGQKGGRSFYRK 22
            SC NIKD E++  L+TLFS LKEL+WRPD+RS+L S L  +G+G++G + F+RK
Sbjct: 425  SCKNIKDSEVSPALSTLFSILKELQWRPDTRSLLSSSLVESGMGKRGSK-FFRK 477


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