BLASTX nr result

ID: Bupleurum21_contig00011691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011691
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628617.1| F-box/kelch-repeat protein [Medicago truncat...    56   3e-06
ref|XP_002298418.1| f-box family protein [Populus trichocarpa] g...    55   8e-06

>ref|XP_003628617.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355522639|gb|AET03093.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 654

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
 Frame = -1

Query: 189 YMESVTSVCDLERDTL------SDIFSRLPAKTLLSCQCVCKRFDALIRDPDFITSHLNW 28
           Y E    + D E   L       +IF RLP K LL  QC+CKR+++LI DPDF+  HL  
Sbjct: 6   YEEEAVQIADDETKPLLPIELVEEIFCRLPVKLLLQLQCMCKRWNSLISDPDFVKKHLRM 65

Query: 27  VTSSTN 10
             +S N
Sbjct: 66  AKASQN 71


>ref|XP_002298418.1| f-box family protein [Populus trichocarpa]
           gi|222845676|gb|EEE83223.1| f-box family protein
           [Populus trichocarpa]
          Length = 363

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/53 (49%), Positives = 35/53 (66%)
 Frame = -1

Query: 159 LERDTLSDIFSRLPAKTLLSCQCVCKRFDALIRDPDFITSHLNWVTSSTNADI 1
           L +D L+DI +RLP KT+L C+CV K + +LI    F T HLN  T + N+DI
Sbjct: 5   LPQDVLTDILARLPFKTILQCRCVSKTWYSLISRSTFATHHLNKTTKTKNSDI 57


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