BLASTX nr result

ID: Bupleurum21_contig00011674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011674
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   182   2e-44
emb|CBI36742.3| unnamed protein product [Vitis vinifera]              167   8e-40
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   167   8e-40
ref|XP_002328426.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39

>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score =  182 bits (463), Expect = 2e-44
 Identities = 95/161 (59%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
 Frame = -1

Query: 482 LILSFIFPAISAVTGQAPGAPANPTDPYPYAKFSPSMAIIIAVLVTALFFMGFFSIYIRR 303
           LI  F     S  T  A  +PA   DPY YA+ +PSMAIII VL+ ALFFMGFFS+YIR 
Sbjct: 8   LISIFTILLASPFTALAQPSPAEARDPYGYARVTPSMAIIIVVLIAALFFMGFFSVYIRH 67

Query: 302 CSQSGTGGSVXXXXXXXXXXXXXXXXXXXXXXXA-LPTLAYSEVKGLHIGKGALECAVCL 126
           C+ S  G SV                          PTL YSEVKGL IGKGALECAVCL
Sbjct: 68  CANSSNGVSVQGLANGGRSRRAAAARGLDAAVIETFPTLVYSEVKGLKIGKGALECAVCL 127

Query: 125 NEFQDDETLRLLPKCDHVFHLECIDMWLASHTTCPVCRADL 3
            EF+DDETLRLLPKCDHVFH +CID WLASHTTCPVCR++L
Sbjct: 128 CEFEDDETLRLLPKCDHVFHPDCIDAWLASHTTCPVCRSNL 168


>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  167 bits (423), Expect = 8e-40
 Identities = 83/136 (61%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 DPYPYAKFSPSMAIIIAVLVTALFFMGFFSIYIRRCSQSGTGGSVXXXXXXXXXXXXXXX 228
           DPY   +FS SMAIII +LV ALF MGFFS+YIR CS S  GGS+               
Sbjct: 81  DPYQQQRFSSSMAIIIVILVAALFLMGFFSVYIRHCSDSRNGGSIRAAAGAALGRSRRGT 140

Query: 227 XXXXXXXXA-LPTLAYSEVKGLHIGKGALECAVCLNEFQDDETLRLLPKCDHVFHLECID 51
                      PT  YS VKGL IGKG LECAVCLNEF+D+ETLRL+PKCDHVFH ECID
Sbjct: 141 RGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECID 200

Query: 50  MWLASHTTCPVCRADL 3
            WLASH TCPVCRA+L
Sbjct: 201 AWLASHVTCPVCRANL 216


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  167 bits (423), Expect = 8e-40
 Identities = 83/136 (61%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 DPYPYAKFSPSMAIIIAVLVTALFFMGFFSIYIRRCSQSGTGGSVXXXXXXXXXXXXXXX 228
           DPY   +FS SMAIII +LV ALF MGFFS+YIR CS S  GGS+               
Sbjct: 53  DPYQQQRFSSSMAIIIVILVAALFLMGFFSVYIRHCSDSRNGGSIRAAAGAALGRSRRGT 112

Query: 227 XXXXXXXXA-LPTLAYSEVKGLHIGKGALECAVCLNEFQDDETLRLLPKCDHVFHLECID 51
                      PT  YS VKGL IGKG LECAVCLNEF+D+ETLRL+PKCDHVFH ECID
Sbjct: 113 RGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECID 172

Query: 50  MWLASHTTCPVCRADL 3
            WLASH TCPVCRA+L
Sbjct: 173 AWLASHVTCPVCRANL 188


>ref|XP_002328426.1| predicted protein [Populus trichocarpa] gi|222838141|gb|EEE76506.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/161 (53%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
 Frame = -1

Query: 482 LILSFIFPAISAVTGQAPGAPANPTDPYPYAKFSPSMAIIIAVLVTALFFMGFFSIYIRR 303
           L++ FI      V  Q      N   PY YA+ +PSMAIII VL+  LF MGFFSIYIR 
Sbjct: 5   LLVLFILSTPHGVVSQTTNT--NDGQPYNYARVTPSMAIIIVVLIAVLFIMGFFSIYIRH 62

Query: 302 CSQSGTGGSVXXXXXXXXXXXXXXXXXXXXXXXA-LPTLAYSEVKGLHIGKGALECAVCL 126
           C+++   GS+                          PTL YS VKGL IGKGALECAVCL
Sbjct: 63  CNEANGNGSIRPLGMGGLSRRVAASRGLDPAVIETFPTLIYSVVKGLKIGKGALECAVCL 122

Query: 125 NEFQDDETLRLLPKCDHVFHLECIDMWLASHTTCPVCRADL 3
           NEF++DETLRL+P CDHVFH +CI  WL SHTTCPVCRADL
Sbjct: 123 NEFEEDETLRLIPNCDHVFHPDCIGAWLESHTTCPVCRADL 163


>ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|222857937|gb|EEE95484.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/132 (62%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
 Frame = -1

Query: 395 YAKFSPSMAIIIAVLVTALFFMGFFSIYIRRCSQSGTGGSVXXXXXXXXXXXXXXXXXXX 216
           YA+ +PSMAIII VLV ALF MGFFSIYIR C+++   GS+                   
Sbjct: 31  YAQVTPSMAIIIVVLVAALFSMGFFSIYIRHCNEASANGSIRALGVVGLSRRAAASRGLD 90

Query: 215 XXXXA-LPTLAYSEVKGLHIGKGALECAVCLNEFQDDETLRLLPKCDHVFHLECIDMWLA 39
                  PTL YS VKGL IGKGALECAVCLNEF+DDETLRL+P CDHVFH +CID WL 
Sbjct: 91  PGVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEDDETLRLIPNCDHVFHPDCIDAWLE 150

Query: 38  SHTTCPVCRADL 3
           SHTTCPVCRADL
Sbjct: 151 SHTTCPVCRADL 162


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