BLASTX nr result

ID: Bupleurum21_contig00011653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011653
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|1...   268   2e-69
emb|CBI33697.3| unnamed protein product [Vitis vinifera]              266   5e-69
gb|AEV41136.1| D5-type cyclin [Populus x canadensis]                  265   2e-68
ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera] gi|3...   246   1e-62
ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223...   236   8e-60

>ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|159025723|emb|CAN88862.1|
            D5-type cyclin [Populus trichocarpa]
            gi|222840831|gb|EEE78378.1| predicted protein [Populus
            trichocarpa]
          Length = 337

 Score =  268 bits (685), Expect = 2e-69
 Identities = 153/336 (45%), Positives = 215/336 (63%), Gaps = 17/336 (5%)
 Frame = -1

Query: 1094 SFSMPSLLCQEDESFLNNEHLEQQLHSSLSFS------QTDNNDDYIQTLIEKETXXXXX 933
            S S+ SLLC E+ES   N+ +    HS++         +T+ + +Y++ L+E+ET     
Sbjct: 7    SLSLSSLLCHENESCFFNDSISD--HSNIKHDRSRFGLETEVDVEYVEKLVERETITFGY 64

Query: 932  XXXXXXXSAVN-----LKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDI 768
                     +      LK+ARLDAI W  +TR+I+GF   TAYLS+TYFD F S+R ID 
Sbjct: 65   RCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDE 124

Query: 767  GKVWTIRLLAVACLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGL 588
            GK+W IRLL+VACLSLAAKMEERKVP LSE+ V++Y F   +IQRMELLVLN LEW++  
Sbjct: 125  GKLWAIRLLSVACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQRMELLVLNTLEWRMNS 184

Query: 587  ITPFEFIHYFITKFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDD 408
            ITPF ++HYFI K  G  + P + VS+A+E + ++IKEI L+DHRPS+I       AS+ 
Sbjct: 185  ITPFAYLHYFIHKTCGE-STPKETVSRAVELIVAMIKEIDLLDHRPSIIAAAAVLAASNR 243

Query: 407  QLTRTVMELKINVIASWGSEDKENIFSCHNLLVELEMAKCKTPK------SSVLQQNVTS 246
            QLTR  +ELK+++I+SWGS + EN+FSC+  + E+EM K KTP+      SS +      
Sbjct: 244  QLTRKELELKMDMISSWGSLENENVFSCYIAMQEIEMGKAKTPRLVFYPNSSAIHSGSFD 303

Query: 245  SDQNSLVTSGGGVGTKRKLAYDVDSEKQGPSHKTFR 138
              +NS + SG G+  KR L ++ + ++  P+ K  R
Sbjct: 304  VLENSSLVSGAGI--KRSLTFN-ECDQTCPAKKICR 336


>emb|CBI33697.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  266 bits (681), Expect = 5e-69
 Identities = 149/311 (47%), Positives = 206/311 (66%), Gaps = 6/311 (1%)
 Frame = -1

Query: 1094 SFSMPSLLCQEDESFLNNEHLEQQLH-SSLSFSQTDNNDDYIQTLIEKETXXXXXXXXXX 918
            S+S+PSLLCQE+E+    E  +Q ++     FSQ++  D+YIQ+L+++ET          
Sbjct: 10   SYSLPSLLCQENEACFGEEEQDQYMNLDPCLFSQSE--DEYIQSLVKRETKSTMSSDNRS 67

Query: 917  XXSAVNLKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDIGKVWTIRLLA 738
              +   LK ARLD+I+W  +TR+ FGF  RTAYL + YFDLF SRR ID  + W   LL+
Sbjct: 68   ITNQSWLKRARLDSIKWVLNTRAFFGFQYRTAYLCVAYFDLFLSRRSIDNERFWATGLLS 127

Query: 737  VACLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPFEFIHYF 558
            VACLSLAAKMEE +VP LSE+ V+ Y F+  +I+RMEL+VL  LEWK+  ITPF+FI  F
Sbjct: 128  VACLSLAAKMEELRVPNLSEFPVEGYYFDNKVIRRMELMVLETLEWKMLSITPFDFIPCF 187

Query: 557  ITKFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDDQLTRTVMELK 378
            I KF G  +   +LVS+ ME + +I +E++LMDHRPSVI       A D QLTR  M+ K
Sbjct: 188  INKFCGE-SKSKELVSRTMELLLAITREVNLMDHRPSVIAAAAVLAAFDGQLTRKTMDCK 246

Query: 377  INVIASWGSEDKENIFSCHNLLVELEMAKCKTPKSSVLQQNVTSSDQNSLV-----TSGG 213
            ++VI+ WGS + E+IFSC+ LL E+EM K KTPK  ++  N++ SD +S +     +   
Sbjct: 247  MSVISLWGSRENEHIFSCYRLLQEIEMGKSKTPK-QLISPNLSLSDNSSSIDVDESSFTS 305

Query: 212  GVGTKRKLAYD 180
             VG+KR+L Y+
Sbjct: 306  AVGSKRRLIYN 316


>gb|AEV41136.1| D5-type cyclin [Populus x canadensis]
          Length = 337

 Score =  265 bits (677), Expect = 2e-68
 Identities = 149/322 (46%), Positives = 207/322 (64%), Gaps = 17/322 (5%)
 Frame = -1

Query: 1094 SFSMPSLLCQEDESFLNNEHLEQQLHSSLSFSQ------TDNNDDYIQTLIEKETXXXXX 933
            S S+ SLLC E+ES   N+ +    HS++   Q      T+ + +Y++ L+E+ET     
Sbjct: 7    SLSLSSLLCYENESCFFNDSISD--HSNIKHDQSRFGLETEVDVEYVEKLVERETITFGY 64

Query: 932  XXXXXXXSAVN-----LKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDI 768
                     +      LK+ARLDAI W  +TR+I+GF   TAYLS+TYFD F S+R ID 
Sbjct: 65   RCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDE 124

Query: 767  GKVWTIRLLAVACLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGL 588
            GK+W IRLL+VACLSLAAKMEERKVP LSE+ V++Y F   +IQRME LVLN LEW++  
Sbjct: 125  GKLWAIRLLSVACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQRMEFLVLNTLEWRMNS 184

Query: 587  ITPFEFIHYFITKFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDD 408
            ITPF ++HYFI K  G  + P + VS+A+E + ++IKEI L+DHRPS+I       AS+ 
Sbjct: 185  ITPFAYLHYFIHKTCGE-STPKETVSRAVELIVAMIKEIDLLDHRPSIIAAAAVLAASNR 243

Query: 407  QLTRTVMELKINVIASWGSEDKENIFSCHNLLVELEMAKCKTPK------SSVLQQNVTS 246
            +LTR  +ELK+++I+SWGS + EN+FSC+  + E+EM K KTP+      SS +      
Sbjct: 244  KLTRKELELKMDMISSWGSLENENVFSCYIAMQEIEMGKAKTPRLVFYPNSSAIHSGSFD 303

Query: 245  SDQNSLVTSGGGVGTKRKLAYD 180
              +NS + SG G+  KR L ++
Sbjct: 304  VLENSSLVSGAGI--KRSLTFN 323


>ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera] gi|302142205|emb|CBI19408.3|
            unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  246 bits (627), Expect = 1e-62
 Identities = 147/320 (45%), Positives = 195/320 (60%), Gaps = 6/320 (1%)
 Frame = -1

Query: 1088 SMPSLLCQEDESFLNNEHLEQQLHSSLSFSQTDNNDD-YIQTLIEKETXXXXXXXXXXXX 912
            S  SLLC  DE  ++    E+   S  + + +D  DD Y+Q L+++E             
Sbjct: 5    SYSSLLCL-DEDVVD----EEAFISFKNCTPSDTEDDEYVQLLVDREMSFGIKTNHSFLI 59

Query: 911  SAVNLKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDIGKVWTIRLLAVA 732
                +K ARLDA+ W   TR++FGF  +TAYL + Y D F SRR ID  K W IRLL+VA
Sbjct: 60   LNW-VKLARLDAVAWILRTRAVFGFRFQTAYLCVAYLDRFLSRRAIDSDKTWAIRLLSVA 118

Query: 731  CLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPFEFIHYFIT 552
            CLSLAAKMEE + P LSE+ V+EYNFE  +IQRMELLVLN LEW++G ITPF FIHYFIT
Sbjct: 119  CLSLAAKMEECRAPALSEFAVEEYNFESKVIQRMELLVLNTLEWRMGSITPFAFIHYFIT 178

Query: 551  KFFGYCN--PPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDDQLTRTVMELK 378
            KF   CN  PP ++VS+ ++   +I++EI+LMDHRPSVI       A D +LTR  +E K
Sbjct: 179  KF---CNQSPPPNVVSRTVQLTMAIMREINLMDHRPSVIAAAAVLVALDQRLTRNELESK 235

Query: 377  INVIASWGSEDKENIFSCHNLLVELEMAKCK---TPKSSVLQQNVTSSDQNSLVTSGGGV 207
            +N I+S GS   E++FSC++++  L+  KC     P ++ L+  V    +NS VTS    
Sbjct: 236  MNAISSCGSLQPEDVFSCYSVVQGLDKEKCALSLNPSTTQLRPAV-DVHENSSVTSAAST 294

Query: 206  GTKRKLAYDVDSEKQGPSHK 147
              KR   YD D     P+ K
Sbjct: 295  KRKRLTFYDCDPNYGIPNEK 314


>ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223550804|gb|EEF52290.1|
            cyclin d, putative [Ricinus communis]
          Length = 327

 Score =  236 bits (602), Expect = 8e-60
 Identities = 143/325 (44%), Positives = 192/325 (59%), Gaps = 8/325 (2%)
 Frame = -1

Query: 1088 SMPSLLCQEDESFLNNEHLEQQLHSSLSFSQTDNNDDYIQTLIEKETXXXXXXXXXXXXS 909
            S+  LLCQE E+ L  + L         F   D  ++Y++ L+EKE             +
Sbjct: 5    SISELLCQESETRLEEQELGDDEAIRNGFGDLDREEEYVEMLVEKEISFSKSKEDQSLST 64

Query: 908  AVN-LKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDIGKVWTIRLLAVA 732
              N +K+ARL+AI W    R+IFGF  +TAYLS+TYFD F SRR ID  K W ++LL+VA
Sbjct: 65   FDNWVKFARLEAITWILKNRAIFGFGFQTAYLSITYFDRFLSRRSIDREKSWAVKLLSVA 124

Query: 731  CLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPFEFIHYFIT 552
            CLSLAAKMEE KVP LS + ++EYNFE  +IQRMELLVLN LEW++   TPF F+HYFI 
Sbjct: 125  CLSLAAKMEEIKVPPLSNFQIEEYNFESKVIQRMELLVLNTLEWRMISSTPFAFLHYFII 184

Query: 551  KFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDDQLTRTVMELKIN 372
            KF     P   LVS+ +  + +++KEI+ M+HRPSVI       + D  L R  +E KI+
Sbjct: 185  KFSKEPPPSRHLVSRTVGLIFAVVKEITSMEHRPSVIAAAAALMSLDRNLIRKALECKID 244

Query: 371  VIASWGSEDKENIFSCHNLLVELEMAKCKTP---KSSV--LQQNVTSSDQNSLVTSGGGV 207
             I+  G  + E++F C++L+ +LEM K  TP    S V   Q    S  +NS VTS   +
Sbjct: 245  SISPSGFLEIEDVFQCYSLMQKLEMEKHGTPTFVNSDVWPTQFRPMSVLENSSVTS--AI 302

Query: 206  GTKRK-LAYDVDSEKQG-PSHKTFR 138
             +KRK LA+    +  G P  K  R
Sbjct: 303  SSKRKRLAFSDSDQNYGLPDQKRHR 327


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