BLASTX nr result
ID: Bupleurum21_contig00011653
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00011653 (1139 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|1... 268 2e-69 emb|CBI33697.3| unnamed protein product [Vitis vinifera] 266 5e-69 gb|AEV41136.1| D5-type cyclin [Populus x canadensis] 265 2e-68 ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera] gi|3... 246 1e-62 ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223... 236 8e-60 >ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|159025723|emb|CAN88862.1| D5-type cyclin [Populus trichocarpa] gi|222840831|gb|EEE78378.1| predicted protein [Populus trichocarpa] Length = 337 Score = 268 bits (685), Expect = 2e-69 Identities = 153/336 (45%), Positives = 215/336 (63%), Gaps = 17/336 (5%) Frame = -1 Query: 1094 SFSMPSLLCQEDESFLNNEHLEQQLHSSLSFS------QTDNNDDYIQTLIEKETXXXXX 933 S S+ SLLC E+ES N+ + HS++ +T+ + +Y++ L+E+ET Sbjct: 7 SLSLSSLLCHENESCFFNDSISD--HSNIKHDRSRFGLETEVDVEYVEKLVERETITFGY 64 Query: 932 XXXXXXXSAVN-----LKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDI 768 + LK+ARLDAI W +TR+I+GF TAYLS+TYFD F S+R ID Sbjct: 65 RCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDE 124 Query: 767 GKVWTIRLLAVACLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGL 588 GK+W IRLL+VACLSLAAKMEERKVP LSE+ V++Y F +IQRMELLVLN LEW++ Sbjct: 125 GKLWAIRLLSVACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQRMELLVLNTLEWRMNS 184 Query: 587 ITPFEFIHYFITKFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDD 408 ITPF ++HYFI K G + P + VS+A+E + ++IKEI L+DHRPS+I AS+ Sbjct: 185 ITPFAYLHYFIHKTCGE-STPKETVSRAVELIVAMIKEIDLLDHRPSIIAAAAVLAASNR 243 Query: 407 QLTRTVMELKINVIASWGSEDKENIFSCHNLLVELEMAKCKTPK------SSVLQQNVTS 246 QLTR +ELK+++I+SWGS + EN+FSC+ + E+EM K KTP+ SS + Sbjct: 244 QLTRKELELKMDMISSWGSLENENVFSCYIAMQEIEMGKAKTPRLVFYPNSSAIHSGSFD 303 Query: 245 SDQNSLVTSGGGVGTKRKLAYDVDSEKQGPSHKTFR 138 +NS + SG G+ KR L ++ + ++ P+ K R Sbjct: 304 VLENSSLVSGAGI--KRSLTFN-ECDQTCPAKKICR 336 >emb|CBI33697.3| unnamed protein product [Vitis vinifera] Length = 330 Score = 266 bits (681), Expect = 5e-69 Identities = 149/311 (47%), Positives = 206/311 (66%), Gaps = 6/311 (1%) Frame = -1 Query: 1094 SFSMPSLLCQEDESFLNNEHLEQQLH-SSLSFSQTDNNDDYIQTLIEKETXXXXXXXXXX 918 S+S+PSLLCQE+E+ E +Q ++ FSQ++ D+YIQ+L+++ET Sbjct: 10 SYSLPSLLCQENEACFGEEEQDQYMNLDPCLFSQSE--DEYIQSLVKRETKSTMSSDNRS 67 Query: 917 XXSAVNLKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDIGKVWTIRLLA 738 + LK ARLD+I+W +TR+ FGF RTAYL + YFDLF SRR ID + W LL+ Sbjct: 68 ITNQSWLKRARLDSIKWVLNTRAFFGFQYRTAYLCVAYFDLFLSRRSIDNERFWATGLLS 127 Query: 737 VACLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPFEFIHYF 558 VACLSLAAKMEE +VP LSE+ V+ Y F+ +I+RMEL+VL LEWK+ ITPF+FI F Sbjct: 128 VACLSLAAKMEELRVPNLSEFPVEGYYFDNKVIRRMELMVLETLEWKMLSITPFDFIPCF 187 Query: 557 ITKFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDDQLTRTVMELK 378 I KF G + +LVS+ ME + +I +E++LMDHRPSVI A D QLTR M+ K Sbjct: 188 INKFCGE-SKSKELVSRTMELLLAITREVNLMDHRPSVIAAAAVLAAFDGQLTRKTMDCK 246 Query: 377 INVIASWGSEDKENIFSCHNLLVELEMAKCKTPKSSVLQQNVTSSDQNSLV-----TSGG 213 ++VI+ WGS + E+IFSC+ LL E+EM K KTPK ++ N++ SD +S + + Sbjct: 247 MSVISLWGSRENEHIFSCYRLLQEIEMGKSKTPK-QLISPNLSLSDNSSSIDVDESSFTS 305 Query: 212 GVGTKRKLAYD 180 VG+KR+L Y+ Sbjct: 306 AVGSKRRLIYN 316 >gb|AEV41136.1| D5-type cyclin [Populus x canadensis] Length = 337 Score = 265 bits (677), Expect = 2e-68 Identities = 149/322 (46%), Positives = 207/322 (64%), Gaps = 17/322 (5%) Frame = -1 Query: 1094 SFSMPSLLCQEDESFLNNEHLEQQLHSSLSFSQ------TDNNDDYIQTLIEKETXXXXX 933 S S+ SLLC E+ES N+ + HS++ Q T+ + +Y++ L+E+ET Sbjct: 7 SLSLSSLLCYENESCFFNDSISD--HSNIKHDQSRFGLETEVDVEYVEKLVERETITFGY 64 Query: 932 XXXXXXXSAVN-----LKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDI 768 + LK+ARLDAI W +TR+I+GF TAYLS+TYFD F S+R ID Sbjct: 65 RCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDE 124 Query: 767 GKVWTIRLLAVACLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGL 588 GK+W IRLL+VACLSLAAKMEERKVP LSE+ V++Y F +IQRME LVLN LEW++ Sbjct: 125 GKLWAIRLLSVACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQRMEFLVLNTLEWRMNS 184 Query: 587 ITPFEFIHYFITKFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDD 408 ITPF ++HYFI K G + P + VS+A+E + ++IKEI L+DHRPS+I AS+ Sbjct: 185 ITPFAYLHYFIHKTCGE-STPKETVSRAVELIVAMIKEIDLLDHRPSIIAAAAVLAASNR 243 Query: 407 QLTRTVMELKINVIASWGSEDKENIFSCHNLLVELEMAKCKTPK------SSVLQQNVTS 246 +LTR +ELK+++I+SWGS + EN+FSC+ + E+EM K KTP+ SS + Sbjct: 244 KLTRKELELKMDMISSWGSLENENVFSCYIAMQEIEMGKAKTPRLVFYPNSSAIHSGSFD 303 Query: 245 SDQNSLVTSGGGVGTKRKLAYD 180 +NS + SG G+ KR L ++ Sbjct: 304 VLENSSLVSGAGI--KRSLTFN 323 >ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera] gi|302142205|emb|CBI19408.3| unnamed protein product [Vitis vinifera] Length = 317 Score = 246 bits (627), Expect = 1e-62 Identities = 147/320 (45%), Positives = 195/320 (60%), Gaps = 6/320 (1%) Frame = -1 Query: 1088 SMPSLLCQEDESFLNNEHLEQQLHSSLSFSQTDNNDD-YIQTLIEKETXXXXXXXXXXXX 912 S SLLC DE ++ E+ S + + +D DD Y+Q L+++E Sbjct: 5 SYSSLLCL-DEDVVD----EEAFISFKNCTPSDTEDDEYVQLLVDREMSFGIKTNHSFLI 59 Query: 911 SAVNLKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDIGKVWTIRLLAVA 732 +K ARLDA+ W TR++FGF +TAYL + Y D F SRR ID K W IRLL+VA Sbjct: 60 LNW-VKLARLDAVAWILRTRAVFGFRFQTAYLCVAYLDRFLSRRAIDSDKTWAIRLLSVA 118 Query: 731 CLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPFEFIHYFIT 552 CLSLAAKMEE + P LSE+ V+EYNFE +IQRMELLVLN LEW++G ITPF FIHYFIT Sbjct: 119 CLSLAAKMEECRAPALSEFAVEEYNFESKVIQRMELLVLNTLEWRMGSITPFAFIHYFIT 178 Query: 551 KFFGYCN--PPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDDQLTRTVMELK 378 KF CN PP ++VS+ ++ +I++EI+LMDHRPSVI A D +LTR +E K Sbjct: 179 KF---CNQSPPPNVVSRTVQLTMAIMREINLMDHRPSVIAAAAVLVALDQRLTRNELESK 235 Query: 377 INVIASWGSEDKENIFSCHNLLVELEMAKCK---TPKSSVLQQNVTSSDQNSLVTSGGGV 207 +N I+S GS E++FSC++++ L+ KC P ++ L+ V +NS VTS Sbjct: 236 MNAISSCGSLQPEDVFSCYSVVQGLDKEKCALSLNPSTTQLRPAV-DVHENSSVTSAAST 294 Query: 206 GTKRKLAYDVDSEKQGPSHK 147 KR YD D P+ K Sbjct: 295 KRKRLTFYDCDPNYGIPNEK 314 >ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223550804|gb|EEF52290.1| cyclin d, putative [Ricinus communis] Length = 327 Score = 236 bits (602), Expect = 8e-60 Identities = 143/325 (44%), Positives = 192/325 (59%), Gaps = 8/325 (2%) Frame = -1 Query: 1088 SMPSLLCQEDESFLNNEHLEQQLHSSLSFSQTDNNDDYIQTLIEKETXXXXXXXXXXXXS 909 S+ LLCQE E+ L + L F D ++Y++ L+EKE + Sbjct: 5 SISELLCQESETRLEEQELGDDEAIRNGFGDLDREEEYVEMLVEKEISFSKSKEDQSLST 64 Query: 908 AVN-LKWARLDAIRWTFSTRSIFGFHIRTAYLSLTYFDLFFSRRFIDIGKVWTIRLLAVA 732 N +K+ARL+AI W R+IFGF +TAYLS+TYFD F SRR ID K W ++LL+VA Sbjct: 65 FDNWVKFARLEAITWILKNRAIFGFGFQTAYLSITYFDRFLSRRSIDREKSWAVKLLSVA 124 Query: 731 CLSLAAKMEERKVPLLSEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPFEFIHYFIT 552 CLSLAAKMEE KVP LS + ++EYNFE +IQRMELLVLN LEW++ TPF F+HYFI Sbjct: 125 CLSLAAKMEEIKVPPLSNFQIEEYNFESKVIQRMELLVLNTLEWRMISSTPFAFLHYFII 184 Query: 551 KFFGYCNPPADLVSKAMESVSSIIKEISLMDHRPSVIXXXXXXXASDDQLTRTVMELKIN 372 KF P LVS+ + + +++KEI+ M+HRPSVI + D L R +E KI+ Sbjct: 185 KFSKEPPPSRHLVSRTVGLIFAVVKEITSMEHRPSVIAAAAALMSLDRNLIRKALECKID 244 Query: 371 VIASWGSEDKENIFSCHNLLVELEMAKCKTP---KSSV--LQQNVTSSDQNSLVTSGGGV 207 I+ G + E++F C++L+ +LEM K TP S V Q S +NS VTS + Sbjct: 245 SISPSGFLEIEDVFQCYSLMQKLEMEKHGTPTFVNSDVWPTQFRPMSVLENSSVTS--AI 302 Query: 206 GTKRK-LAYDVDSEKQG-PSHKTFR 138 +KRK LA+ + G P K R Sbjct: 303 SSKRKRLAFSDSDQNYGLPDQKRHR 327