BLASTX nr result

ID: Bupleurum21_contig00011628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011628
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634525.1| PREDICTED: uncharacterized protein LOC100854...   165   3e-39
ref|XP_002524329.1| conserved hypothetical protein [Ricinus comm...   158   4e-37
ref|XP_002307512.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
gb|ACU16528.1| unknown [Glycine max]                                  152   3e-35
ref|XP_002300906.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34

>ref|XP_003634525.1| PREDICTED: uncharacterized protein LOC100854917 [Vitis vinifera]
           gi|296081214|emb|CBI18240.3| unnamed protein product
           [Vitis vinifera]
          Length = 205

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/159 (58%), Positives = 103/159 (64%)
 Frame = +1

Query: 1   MLLAVEXXXXXXXXXXXYTKGXXXXXXGQKNEEKPMRVTPWSQYHLVDQESDPDLQLASS 180
           MLLAVE           YTKG      GQKNEEKPMRV+PW+QY LVDQESD DLQLAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYTKGLTLLLLGQKNEEKPMRVSPWNQYQLVDQESDTDLQLASG 60

Query: 181 KNRLVRGCASFICFGRTASGLECPSPLKVGPTHQQDVLPEAPVFDKGNDDSKTTDGVDVD 360
           KNRL RGCASF+CFGR ++GLE PSPLKVGP  QQD LP  P+ DKG D   TTD  D D
Sbjct: 61  KNRLSRGCASFVCFGRASAGLEVPSPLKVGPVQQQDGLPGPPISDKGKD--HTTDHGD-D 117

Query: 361 IVTKQNDLKSSLKKSTTRIPVSSGVSNDNDAASEKSSSV 477
              +   LKSSLKK    IPVS G  N+ +   E  S +
Sbjct: 118 NNERDVPLKSSLKKPFNSIPVSGG-DNECEPLGETCSDI 155


>ref|XP_002524329.1| conserved hypothetical protein [Ricinus communis]
           gi|223536420|gb|EEF38069.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  158 bits (400), Expect = 4e-37
 Identities = 83/159 (52%), Positives = 104/159 (65%)
 Frame = +1

Query: 1   MLLAVEXXXXXXXXXXXYTKGXXXXXXGQKNEEKPMRVTPWSQYHLVDQESDPDLQLASS 180
           MLLAVE           Y+KG      GQ++E+KPMRV PW+QY LV+ E DPDLQLAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQRHEDKPMRVAPWNQYQLVENEPDPDLQLASL 60

Query: 181 KNRLVRGCASFICFGRTASGLECPSPLKVGPTHQQDVLPEAPVFDKGNDDSKTTDGVDVD 360
           KNRL RGCASF+CFGR ++GL+ PSPLKVGP  QQDVLP+  V DK  D++   +G   D
Sbjct: 61  KNRLSRGCASFVCFGRASAGLDSPSPLKVGPAQQQDVLPDPLVADKDKDNTTELEG---D 117

Query: 361 IVTKQNDLKSSLKKSTTRIPVSSGVSNDNDAASEKSSSV 477
              ++  LKSSLKK T  IPV    +N ++   EK S++
Sbjct: 118 NNVRRVMLKSSLKKPTNSIPVPVENANQHNTLGEKGSNI 156


>ref|XP_002307512.1| predicted protein [Populus trichocarpa] gi|222856961|gb|EEE94508.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  156 bits (395), Expect = 1e-36
 Identities = 84/159 (52%), Positives = 105/159 (66%)
 Frame = +1

Query: 1   MLLAVEXXXXXXXXXXXYTKGXXXXXXGQKNEEKPMRVTPWSQYHLVDQESDPDLQLASS 180
           MLLAVE           Y+KG      GQK+E+KPMRVTPW+QY LVDQE D DLQLAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQKHEDKPMRVTPWNQYQLVDQEPDFDLQLASL 60

Query: 181 KNRLVRGCASFICFGRTASGLECPSPLKVGPTHQQDVLPEAPVFDKGNDDSKTTDGVDVD 360
           KNRL RGCASF+CFGR ++GLE PSPLKVGP  Q+DVLP+  V DKG D +   +G   D
Sbjct: 61  KNRLSRGCASFVCFGRASAGLESPSPLKVGPAQQKDVLPDPLVADKGKDLTTELEG---D 117

Query: 361 IVTKQNDLKSSLKKSTTRIPVSSGVSNDNDAASEKSSSV 477
               +  L+SSLKK++  IPV    +N ++  ++K S +
Sbjct: 118 NNAIKVTLRSSLKKTSKSIPVPVEDANQSEPLNDKGSDI 156


>gb|ACU16528.1| unknown [Glycine max]
          Length = 209

 Score =  152 bits (384), Expect = 3e-35
 Identities = 80/152 (52%), Positives = 100/152 (65%)
 Frame = +1

Query: 1   MLLAVEXXXXXXXXXXXYTKGXXXXXXGQKNEEKPMRVTPWSQYHLVDQESDPDLQLASS 180
           MLLAVE           YTKG      GQ+NE+KPMRV PW+QY LVDQESDP+LQLAS+
Sbjct: 1   MLLAVEGGGLFSASASGYTKGLSLLLLGQRNEDKPMRVAPWNQYQLVDQESDPELQLAST 60

Query: 181 KNRLVRGCASFICFGRTASGLECPSPLKVGPTHQQDVLPEAPVFDKGNDDSKTTDGVDVD 360
           KNRL RGCASF+CFGRT++GL+ PSP KVGP  Q DV P   V +KG D S     VD +
Sbjct: 61  KNRLSRGCASFVCFGRTSAGLDTPSPPKVGPAQQHDVSPGTLVSNKGKDPSA---HVDDE 117

Query: 361 IVTKQNDLKSSLKKSTTRIPVSSGVSNDNDAA 456
              ++  LKSS+KK     P+    +N+++A+
Sbjct: 118 SDNRKVTLKSSIKKPQISKPIPVEAANEHEAS 149


>ref|XP_002300906.1| predicted protein [Populus trichocarpa] gi|222842632|gb|EEE80179.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  147 bits (372), Expect = 7e-34
 Identities = 82/141 (58%), Positives = 95/141 (67%)
 Frame = +1

Query: 1   MLLAVEXXXXXXXXXXXYTKGXXXXXXGQKNEEKPMRVTPWSQYHLVDQESDPDLQLASS 180
           MLLAVE           Y+KG      GQK+E+KPMRVTPW+QY LVDQE D DLQLAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQKHEDKPMRVTPWNQYQLVDQEPDSDLQLASL 60

Query: 181 KNRLVRGCASFICFGRTASGLECPSPLKVGPTHQQDVLPEAPVFDKGNDDSKTTDGVDVD 360
           KNRL  GCASFICFGR AS  E PSPLKVGP  QQDVLP+  V D+  D    T  ++VD
Sbjct: 61  KNRLSHGCASFICFGR-ASAHESPSPLKVGPAQQQDVLPDPLVADREKD---LTTELEVD 116

Query: 361 IVTKQNDLKSSLKKSTTRIPV 423
              ++  LKS+LKK++ RIPV
Sbjct: 117 NYARKITLKSNLKKASKRIPV 137


Top