BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011613
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36650.1| C3HL domain class transcription factor [Malus x d...   385   e-112
emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]   385   e-111
ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   384   e-110
ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [...   388   e-110
ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containin...   382   e-109

>gb|ADL36650.1| C3HL domain class transcription factor [Malus x domestica]
          Length = 665

 Score =  385 bits (988), Expect(2) = e-112
 Identities = 204/341 (59%), Positives = 232/341 (68%), Gaps = 12/341 (3%)
 Frame = -2

Query: 1025 RAYSHDWTECPFVHPGENARRRDPKKYTYSCVPCPEFRKGSCVKGDGCEYAHGVFESWLH 846
            RAYSHDWTECPFVHPGENARRRDPKKY YSCVPCPEFRKGSC KGD CEYAHGVFESWLH
Sbjct: 232  RAYSHDWTECPFVHPGENARRRDPKKYPYSCVPCPEFRKGSCQKGDVCEYAHGVFESWLH 291

Query: 845  PAQYRTRLCKDETGCARKVCFFAHKVEELRPLYASTGSAMPSPKSGLVSSMDMGSLSPMG 666
            PAQYRTRLCKDETGC RKVCFFAH+ EELRP+YASTGSAMPSP+S  VS+ DM +LSP+ 
Sbjct: 292  PAQYRTRLCKDETGCTRKVCFFAHRPEELRPVYASTGSAMPSPRSMSVSAADMAALSPLA 351

Query: 665  IGG--------STXXXXXXXXXXXXMGGNLWQNKVNLTPPALQLPGSRLKTALNARDMDL 510
            +G         ST              G LWQNKVNLTPPALQLPGSRLK+A +ARD++L
Sbjct: 352  LGSSAMSMPATSTPPMSPLSAASSPKSGGLWQNKVNLTPPALQLPGSRLKSACSARDLEL 411

Query: 509  EMELLGLGSIRTQQQRQLIDDLXXXXXXXXXXXXXXXNRFGGMIPTNLEDVYGSPDSSYL 330
            EMELLGL S  +QQQ+Q                    +R G + PTNL+D +GS D S L
Sbjct: 412  EMELLGLDSHSSQQQQQQ-QQQHLWDEISRLSSSPSYSRHGELKPTNLDDAFGSVDPSLL 470

Query: 329  SQLQGHSPRVTTTANIPQMQSPTGHQMRQNMNQLRASYPSNVASSPVRKAPTYGFDXXXX 150
            SQLQG S +            P+    RQNMNQLR+SYP+N++SSPVRK  ++G D    
Sbjct: 471  SQLQGLSLK------------PSTPNHRQNMNQLRSSYPTNLSSSPVRKPSSFGLDSPSA 518

Query: 149  XXXXXXXXXXXAFAKQRSQSFIDRGAVS----HNRPAGVST 39
                       AFA+QRSQSFIDRGA++    HN P   ST
Sbjct: 519  LAAAVMNSRSAAFAQQRSQSFIDRGAMNHLPLHNAPVNSST 559



 Score = 47.0 bits (110), Expect(2) = e-112
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 20/81 (24%)
 Frame = -3

Query: 1312 DGNGNKAGDLI------PKFSKKKDXXXXXXXXXXXLD----------IQSPQLA----E 1193
            + NGNKA DLI      P  S++K            ++          + SPQ++    E
Sbjct: 138  NANGNKAVDLIAPALKSPCSSRRKAMEMLLRGDKSIMESDTEEGDQQKVSSPQMSKEGSE 197

Query: 1192 KKEYAIDVSLPDINVGLYGTD 1130
            KKEY ID+SLPDIN G+YGTD
Sbjct: 198  KKEYPIDISLPDINNGIYGTD 218


>emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]
          Length = 674

 Score =  385 bits (988), Expect(2) = e-111
 Identities = 206/344 (59%), Positives = 236/344 (68%), Gaps = 20/344 (5%)
 Frame = -2

Query: 1025 RAYSHDWTECPFVHPGENARRRDPKKYTYSCVPCPEFRKGSCVKGDGCEYAHGVFESWLH 846
            RAYSHDWTECPFVHPGENARRRDPKK+ YSCVPCPE+RKGSC KGD CEYAHGVFE WLH
Sbjct: 220  RAYSHDWTECPFVHPGENARRRDPKKFPYSCVPCPEYRKGSCQKGDSCEYAHGVFECWLH 279

Query: 845  PAQYRTRLCKDETGCARKVCFFAHKVEELRPLYASTGSAMPSPKSGLVSSMDMGSLSPMG 666
            PAQYRTRLCKDETGC+RKVCFFAHK EELRPLYASTGSAMPSP+S   S++DM +LSP+ 
Sbjct: 280  PAQYRTRLCKDETGCSRKVCFFAHKPEELRPLYASTGSAMPSPRSLSASAVDMATLSPLT 339

Query: 665  IGG-----------------STXXXXXXXXXXXXMGGNLWQNKVNLTPPALQLPGSRLKT 537
            +G                  ST                +WQNKVN TPP+LQLPGSRLK+
Sbjct: 340  LGSSALLLPPTSSSLLLPPTSTPPMSPSAVSSSPKSSGMWQNKVNFTPPSLQLPGSRLKS 399

Query: 536  ALNARDMDLEMELLGLGSIRTQQQRQLIDDLXXXXXXXXXXXXXXXNRFGGMIPTNLEDV 357
            AL+ARD++LE+ELL L S  T   +QL+D++               +R G + PTNL+D+
Sbjct: 400  ALSARDLELELELLELESQLT--HKQLMDEM--SSLSSPSCWNKEFSRIGELKPTNLDDM 455

Query: 356  YGSPDSSYLSQLQGHSPRVTT-TANIPQMQSPTGHQMRQNMNQLRASYP--SNVASSPVR 186
            +GS D S LSQLQG S + TT     PQ+QSPTG QMRQNMNQ RASYP  + V SSPVR
Sbjct: 456  FGSFDPSVLSQLQGLSLKATTPQLQSPQLQSPTGLQMRQNMNQQRASYPTKTTVTSSPVR 515

Query: 185  KAPTYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHNRP 54
            K  +YGFD               AFAK RSQSFIDRG +SH  P
Sbjct: 516  KTSSYGFDSSAAVAAAVMNSRSSAFAK-RSQSFIDRGGMSHRSP 558



 Score = 43.9 bits (102), Expect(2) = e-111
 Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 4/31 (12%)
 Frame = -3

Query: 1210 SPQLA----EKKEYAIDVSLPDINVGLYGTD 1130
            +PQL+    EKKEY ID+SLPDIN G+YGTD
Sbjct: 176  APQLSKEGSEKKEYPIDISLPDINNGIYGTD 206


>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like [Vitis
            vinifera]
          Length = 689

 Score =  384 bits (985), Expect(2) = e-110
 Identities = 205/344 (59%), Positives = 236/344 (68%), Gaps = 20/344 (5%)
 Frame = -2

Query: 1025 RAYSHDWTECPFVHPGENARRRDPKKYTYSCVPCPEFRKGSCVKGDGCEYAHGVFESWLH 846
            RAYSHDWTECPFVHPGENARRRDPKK+ YSCVPCPE+RKGSC KGD CEYAHGVFE WLH
Sbjct: 235  RAYSHDWTECPFVHPGENARRRDPKKFPYSCVPCPEYRKGSCQKGDSCEYAHGVFECWLH 294

Query: 845  PAQYRTRLCKDETGCARKVCFFAHKVEELRPLYASTGSAMPSPKSGLVSSMDMGSLSPMG 666
            PAQYRTRLCKDETGC+RKVCFFAH+ EELRPLYASTGSAMPSP+S   S++DM +LSP+ 
Sbjct: 295  PAQYRTRLCKDETGCSRKVCFFAHRPEELRPLYASTGSAMPSPRSLSASAVDMATLSPLT 354

Query: 665  IGG-----------------STXXXXXXXXXXXXMGGNLWQNKVNLTPPALQLPGSRLKT 537
            +G                  ST                +WQNKVN TPP+LQLPGSRLK+
Sbjct: 355  LGSSALLLPPTSSSLLLPPTSTPPMSPSAVSSSPKSSGMWQNKVNFTPPSLQLPGSRLKS 414

Query: 536  ALNARDMDLEMELLGLGSIRTQQQRQLIDDLXXXXXXXXXXXXXXXNRFGGMIPTNLEDV 357
            AL+ARD++LE+ELL L S  T   +QL+D++               +R G + PTNL+D+
Sbjct: 415  ALSARDLELELELLELESQLT--HKQLMDEM--SSLSSPSCWNKEFSRIGELKPTNLDDM 470

Query: 356  YGSPDSSYLSQLQGHSPRVTT-TANIPQMQSPTGHQMRQNMNQLRASYP--SNVASSPVR 186
            +GS D S LSQLQG S + TT     PQ+QSPTG QMRQNMNQ RASYP  + V SSPVR
Sbjct: 471  FGSFDPSVLSQLQGLSLKATTPQLQSPQLQSPTGLQMRQNMNQQRASYPTKTTVTSSPVR 530

Query: 185  KAPTYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHNRP 54
            K  +YGFD               AFAK RSQSFIDRG +SH  P
Sbjct: 531  KTSSYGFDSSAAVAAAVMNSRSSAFAK-RSQSFIDRGGMSHRSP 573



 Score = 43.9 bits (102), Expect(2) = e-110
 Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 4/31 (12%)
 Frame = -3

Query: 1210 SPQLA----EKKEYAIDVSLPDINVGLYGTD 1130
            +PQL+    EKKEY ID+SLPDIN G+YGTD
Sbjct: 191  APQLSKEGSEKKEYPIDISLPDINNGIYGTD 221


>ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355517989|gb|AES99612.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 668

 Score =  388 bits (997), Expect(2) = e-110
 Identities = 209/341 (61%), Positives = 235/341 (68%), Gaps = 19/341 (5%)
 Frame = -2

Query: 1025 RAYSHDWTECPFVHPGENARRRDPKKYTYSCVPCPEFRKGSCVKGDGCEYAHGVFESWLH 846
            RAYSHDWTECPFVHPGENARRRDP+KY YSCVPCPEFRKGSC KGD CEYAHGVFESWLH
Sbjct: 215  RAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGSCQKGDSCEYAHGVFESWLH 274

Query: 845  PAQYRTRLCKDETGCARKVCFFAHKVEELRPLYASTGSAMPSPKSGLVSSMDMGSLSPMG 666
            PAQYRTRLCKDETGC RKVCFFAH+ EELRP+YASTGSAMPSPKS   S MDM S+SP+ 
Sbjct: 275  PAQYRTRLCKDETGCNRKVCFFAHRPEELRPVYASTGSAMPSPKSYSASGMDMTSMSPLS 334

Query: 665  IGG--------STXXXXXXXXXXXXMGGNLWQNKVNLTPPALQLPGSRLKTALNARDMDL 510
            +          ST              GN+WQNK+NLTPP+LQLPGSRLK+AL+ARD+DL
Sbjct: 335  LSSSSLPMSTVSTPPMSPLAGSSSPKSGNMWQNKLNLTPPSLQLPGSRLKSALSARDLDL 394

Query: 509  EMELLGLGSIR----TQQQRQLIDDLXXXXXXXXXXXXXXXNRFGGMIPTNLEDVYGSPD 342
            EMELLGL S R     QQQ+QLI+++               NR   + PTNL+D+  S D
Sbjct: 395  EMELLGLDSPRRQQQQQQQQQLIEEI--ARISSPSFRNSEFNRIADLNPTNLDDLLASAD 452

Query: 341  SSYLSQLQGHSPRVTTTANIPQMQSPTGHQMR------QNMNQLRASYPS-NVASSPVRK 183
             + LSQL G S + +T     QM SP+  QMR      QNMN LRASYPS N+ SSPVRK
Sbjct: 453  PNLLSQLHGLSMQPSTPTQ--QMHSPSAMQMRQNMNMGQNMNHLRASYPSNNMPSSPVRK 510

Query: 182  APTYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHN 60
               YGFD               AFAKQRSQSFIDRGA +H+
Sbjct: 511  PSPYGFDSSAAVAAAVMNSRSAAFAKQRSQSFIDRGAATHH 551



 Score = 38.9 bits (89), Expect(2) = e-110
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
 Frame = -3

Query: 1312 DGNGNKAGDLI-PKFSKKKDXXXXXXXXXXXLDIQSPQL--------------AEKKEYA 1178
            D +GNK  DLI P F+                ++ +  +               +KKE+ 
Sbjct: 126  DASGNKPVDLIAPAFNSSSKSRRKVLEMFLRGEVSAELIQGEMDAPFSLKKEGGDKKEFP 185

Query: 1177 IDVSLPDINVGLYGTD 1130
            ID+SLPDIN G+YG+D
Sbjct: 186  IDISLPDINNGVYGSD 201


>ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  382 bits (980), Expect(2) = e-109
 Identities = 202/331 (61%), Positives = 236/331 (71%), Gaps = 11/331 (3%)
 Frame = -2

Query: 1025 RAYSHDWTECPFVHPGENARRRDPKKYTYSCVPCPEFRKGSCVKGDGCEYAHGVFESWLH 846
            RAYSHDWTECPFVHPGENARRRDP+KY YSCVPCPEFRKG+C K D CEYAHGVFESWLH
Sbjct: 243  RAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGACPKADSCEYAHGVFESWLH 302

Query: 845  PAQYRTRLCKDETGCARKVCFFAHKVEELRPLYASTGSAMPSPKSGLVSSMDMGSLSPMG 666
            PAQYRTRLCKDETGC RKVCFFAHK +ELRP+YASTGS MPSP+S   ++ DM ++SP+ 
Sbjct: 303  PAQYRTRLCKDETGCTRKVCFFAHKPDELRPVYASTGSGMPSPRSLSSNTGDMSTMSPLA 362

Query: 665  IGG--------STXXXXXXXXXXXXMGGNLWQNKVNLTPPALQLPGSRLKTALNARDMDL 510
            +G         ST              GNLWQNK+NLTPPALQLPGSRLK  L+ARD+DL
Sbjct: 363  LGSSSLSLPTTSTPPMSPLASVSSPKNGNLWQNKINLTPPALQLPGSRLKATLSARDLDL 422

Query: 509  EMELLGL--GSIRTQQQRQLIDDLXXXXXXXXXXXXXXXNRFGGMIPTNLEDVYGSPDSS 336
            EMELLGL     + Q Q+QLID++               +R   + P+NL+D++GS DSS
Sbjct: 423  EMELLGLEKNVSQLQHQQQLIDEI---SRLSSPYWNADVSRTAELKPSNLDDMFGSLDSS 479

Query: 335  YLSQLQGHSPRVTTTANIPQMQSPTGHQMRQNMNQLRASYP-SNVASSPVRKAPTYGFDX 159
             LSQLQG S +   +A   Q+QSPTG QMRQNM+QLRASYP +N++SSPV+K  ++GFD 
Sbjct: 480  LLSQLQGASLKTPISA---QVQSPTGLQMRQNMSQLRASYPANNLSSSPVKKPSSFGFDS 536

Query: 158  XXXXXXXXXXXXXXAFAKQRSQSFIDRGAVS 66
                          AFAK RSQSFIDR AVS
Sbjct: 537  SSAVAAAVMNSRSAAFAK-RSQSFIDRAAVS 566



 Score = 42.7 bits (99), Expect(2) = e-109
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -3

Query: 1210 SPQLAEKKEYAIDVSLPDINVGLYGTD 1130
            S + ++KKEY +DVSLPDIN G+YGTD
Sbjct: 203  SKEGSDKKEYPVDVSLPDINSGIYGTD 229