BLASTX nr result

ID: Bupleurum21_contig00011598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011598
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532119.1| conserved hypothetical protein [Ricinus comm...   304   2e-80
ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|2...   300   3e-79
ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein ...   299   9e-79
ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein ...   297   3e-78
emb|CBI20114.3| unnamed protein product [Vitis vinifera]              297   3e-78

>ref|XP_002532119.1| conserved hypothetical protein [Ricinus communis]
            gi|223528199|gb|EEF30259.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 320

 Score =  304 bits (779), Expect = 2e-80
 Identities = 160/261 (61%), Positives = 182/261 (69%)
 Frame = +1

Query: 247  GFVQQAIELIKASPPTWQSAIYCNTAIFLVXXXXXXXXXXXXXXXXXXXXXXXTWRAFGP 426
            G +  A+ LI+++PPTWQSA+  N  IF++                       TWRAFGP
Sbjct: 58   GALSGAMNLIQSAPPTWQSALVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTWRAFGP 117

Query: 427  SGYLLVAAYFVLGTAVTKVKMAQKEAQGVAEKGKGRRGPGSVIGSSAAGCVCALLSVYGV 606
            SG+LLVA YFV+GTA TKVKMAQKEAQGVAEK KGRRGPGSVIGSSAAGCVCA LS+YGV
Sbjct: 118  SGFLLVACYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGV 177

Query: 607  GGSAFFQLWKLGFVASFCTKLGDTVSSEIGKAYGKTTYLITTLKVVPRGTEGAVSLEGTX 786
            GG AF +LW+LGFVASFCTKL DTVSSEIGKAYGK TYL+TT K+VPRGTEGAVS+EGT 
Sbjct: 178  GGEAFSRLWELGFVASFCTKLSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEGTL 237

Query: 787  XXXXXXXXXXXXXXXXXQISIQEAVICVLAAQIANAGESLIGAVLQEKEGFQWLXXXXXX 966
                             +I I EAVICV+A+QIAN GES+IGA  QEKEGF+WL      
Sbjct: 238  AGLLASILLASIGCFLGEIHIPEAVICVIASQIANVGESIIGATFQEKEGFRWLNNDVVN 297

Query: 967  XXXXXXXXXLAILMQQLVLQN 1029
                     LA+LMQQL LQN
Sbjct: 298  VLNISIGSILAVLMQQL-LQN 317


>ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  300 bits (769), Expect = 3e-79
 Identities = 156/261 (59%), Positives = 181/261 (69%)
 Frame = +1

Query: 247  GFVQQAIELIKASPPTWQSAIYCNTAIFLVXXXXXXXXXXXXXXXXXXXXXXXTWRAFGP 426
            G +  A+ LI+++ PTW+SA++ N  IF+V                       TWRAFG 
Sbjct: 13   GVLSDAMNLIQSAHPTWKSALFSNLLIFVVGSPILVSGLSLSGIFAAYLLGTLTWRAFGA 72

Query: 427  SGYLLVAAYFVLGTAVTKVKMAQKEAQGVAEKGKGRRGPGSVIGSSAAGCVCALLSVYGV 606
            SG+LLVA+YFV+GTAVTKVKMAQKEAQGVAEK KGRRGPGSVIGSSAAGCVCA LS++G 
Sbjct: 73   SGFLLVASYFVIGTAVTKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGT 132

Query: 607  GGSAFFQLWKLGFVASFCTKLGDTVSSEIGKAYGKTTYLITTLKVVPRGTEGAVSLEGTX 786
            GG AF  LW+LGFVASFCTKL DTVSSEIGKAYGKTTYL+TT KVVPRGTEGAVS EGT 
Sbjct: 133  GGRAFIALWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSAEGTL 192

Query: 787  XXXXXXXXXXXXXXXXXQISIQEAVICVLAAQIANAGESLIGAVLQEKEGFQWLXXXXXX 966
                             +I+  EAVICV+A+QIAN GES+IGA  QEKEGFQWL      
Sbjct: 193  AGLLASILLASIGCILGEINAPEAVICVIASQIANVGESIIGAAFQEKEGFQWLNNDAVN 252

Query: 967  XXXXXXXXXLAILMQQLVLQN 1029
                     LA+LMQQ+ L++
Sbjct: 253  VINISVGSILAVLMQQVFLRS 273


>ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein sll0875-like [Cucumis
            sativus] gi|449517377|ref|XP_004165722.1| PREDICTED:
            uncharacterized membrane protein sll0875-like [Cucumis
            sativus]
          Length = 313

 Score =  299 bits (765), Expect = 9e-79
 Identities = 164/299 (54%), Positives = 190/299 (63%)
 Frame = +1

Query: 127  LNFPKHQFLTYFNSNSSPKIFKFGVNTVRAQAAAGSNTDMGFVQQAIELIKASPPTWQSA 306
            L FP    +T  N N S K+       VRAQ+             A+ L++++P TW SA
Sbjct: 25   LPFPLKPLITKSNPNPSSKM------VVRAQSFET------LASGAVNLLQSNPATWHSA 72

Query: 307  IYCNTAIFLVXXXXXXXXXXXXXXXXXXXXXXXTWRAFGPSGYLLVAAYFVLGTAVTKVK 486
            +  N  IFL+                       TWRAFGPSG+LLVA YFV+GTA TKVK
Sbjct: 73   LLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVK 132

Query: 487  MAQKEAQGVAEKGKGRRGPGSVIGSSAAGCVCALLSVYGVGGSAFFQLWKLGFVASFCTK 666
            MAQKEAQGVAEK KGRRGPGSVIGSSAAGCVCA+L +  VGG AF QLW+LGFVASFCTK
Sbjct: 133  MAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFAQLWRLGFVASFCTK 192

Query: 667  LGDTVSSEIGKAYGKTTYLITTLKVVPRGTEGAVSLEGTXXXXXXXXXXXXXXXXXXQIS 846
            L DTVSSEIGKAYG+ TYL+T  KVVPRGTEGAVSLEGT                   ++
Sbjct: 193  LSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGDVT 252

Query: 847  IQEAVICVLAAQIANAGESLIGAVLQEKEGFQWLXXXXXXXXXXXXXXXLAILMQQLVL 1023
              EA++CV+A+QIAN GES+IGAVLQEKEGFQWL               LA+LMQQL+L
Sbjct: 253  ASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMGSILAVLMQQLIL 311


>ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein sll0875-like [Vitis
            vinifera]
          Length = 315

 Score =  297 bits (760), Expect = 3e-78
 Identities = 158/258 (61%), Positives = 176/258 (68%)
 Frame = +1

Query: 247  GFVQQAIELIKASPPTWQSAIYCNTAIFLVXXXXXXXXXXXXXXXXXXXXXXXTWRAFGP 426
            G V +AI LI++SP TW+SA+  N  IF+                        TWRAFG 
Sbjct: 55   GAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTWRAFGS 114

Query: 427  SGYLLVAAYFVLGTAVTKVKMAQKEAQGVAEKGKGRRGPGSVIGSSAAGCVCALLSVYGV 606
             G+LLVA YFV+GTA TKVKMAQKEAQGVAEK KGRRGPGSVIGSSAAGCVCA LS+YGV
Sbjct: 115  PGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGV 174

Query: 607  GGSAFFQLWKLGFVASFCTKLGDTVSSEIGKAYGKTTYLITTLKVVPRGTEGAVSLEGTX 786
            GG AF QLW+LGFVASFCTKL DTVSSEIGKAYGKTTYL+TTLK+VPRGTEGAVS EGT 
Sbjct: 175  GGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVSAEGTS 234

Query: 787  XXXXXXXXXXXXXXXXXQISIQEAVICVLAAQIANAGESLIGAVLQEKEGFQWLXXXXXX 966
                             QI   EAVICV+AAQIAN GES IGA LQ KEGF+WL      
Sbjct: 235  AGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFIGAALQGKEGFRWLNNDVVN 294

Query: 967  XXXXXXXXXLAILMQQLV 1020
                     LAIL+Q+++
Sbjct: 295  VINISMGSILAILIQKIL 312


>emb|CBI20114.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  297 bits (760), Expect = 3e-78
 Identities = 158/258 (61%), Positives = 176/258 (68%)
 Frame = +1

Query: 247  GFVQQAIELIKASPPTWQSAIYCNTAIFLVXXXXXXXXXXXXXXXXXXXXXXXTWRAFGP 426
            G V +AI LI++SP TW+SA+  N  IF+                        TWRAFG 
Sbjct: 402  GAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTWRAFGS 461

Query: 427  SGYLLVAAYFVLGTAVTKVKMAQKEAQGVAEKGKGRRGPGSVIGSSAAGCVCALLSVYGV 606
             G+LLVA YFV+GTA TKVKMAQKEAQGVAEK KGRRGPGSVIGSSAAGCVCA LS+YGV
Sbjct: 462  PGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGV 521

Query: 607  GGSAFFQLWKLGFVASFCTKLGDTVSSEIGKAYGKTTYLITTLKVVPRGTEGAVSLEGTX 786
            GG AF QLW+LGFVASFCTKL DTVSSEIGKAYGKTTYL+TTLK+VPRGTEGAVS EGT 
Sbjct: 522  GGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVSAEGTS 581

Query: 787  XXXXXXXXXXXXXXXXXQISIQEAVICVLAAQIANAGESLIGAVLQEKEGFQWLXXXXXX 966
                             QI   EAVICV+AAQIAN GES IGA LQ KEGF+WL      
Sbjct: 582  AGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFIGAALQGKEGFRWLNNDVVN 641

Query: 967  XXXXXXXXXLAILMQQLV 1020
                     LAIL+Q+++
Sbjct: 642  VINISMGSILAILIQKIL 659


Top