BLASTX nr result

ID: Bupleurum21_contig00011589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011589
         (1638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, ch...   514   e-143
emb|CBI25886.3| unnamed protein product [Vitis vinifera]              507   e-141
ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, ch...   471   e-130
ref|XP_003617287.1| GTP-binding protein [Medicago truncatula] gi...   471   e-130
ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ...   466   e-128

>ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like, partial
            [Vitis vinifera]
          Length = 555

 Score =  514 bits (1324), Expect = e-143
 Identities = 298/520 (57%), Positives = 344/520 (66%), Gaps = 28/520 (5%)
 Frame = -1

Query: 1476 NRDPDSPPKLFVVQPRIRPETVLQSKLKEALNLANSLEEQRDGFYDTEFSEKDLPSHIVV 1297
            NRDP SPPKLFVVQPR+RP+T+LQ+KL EA+NLANSLEEQRDG+YDTE  EK LP H+VV
Sbjct: 13   NRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDTELCEKGLPPHVVV 72

Query: 1296 QNPASRTT--RADTYFGPGTVDTIKCHVNALDSKDGFDAVFVNAILSGVQQRNLEQAWGK 1123
            QNPA R++  R+DTYFGPGTVDT+KCH+NA++SK   DAV+VN ILSG+QQRNLE+AWGK
Sbjct: 73   QNPAVRSSKYRSDTYFGPGTVDTVKCHLNAVESKGEIDAVYVNTILSGIQQRNLERAWGK 132

Query: 1122 PVLDRVSLIIEIFNAHAQTXXXXXXXXXXXLMYKRSRLVRVRGAGGRYTFGE--ETEVVX 949
            PVLDRV LIIEIFNAHAQT           LMYKR+RLVRVRG  GRYTFG   ETEVV 
Sbjct: 133  PVLDRVGLIIEIFNAHAQTKEAKLQAELAALMYKRTRLVRVRGPDGRYTFGATGETEVVS 192

Query: 948  XXXXXXXXXXXXXXXG----ETXXXXXXXXXXXXRNQLLSEIKEVXXXXXXXXXXXXRHG 781
                                ET            RN LLS+I+ V            R G
Sbjct: 193  ARGVHHRRGSGGRGFISGAGETELQLQRRRILERRNHLLSQIEAVRRTRALQRASRKRRG 252

Query: 780  GSDGQDIATVAVVGYTNAGKSTLVSALSDTYLYSDDRLFATVDPKLRSVILPSGRKVLLS 601
            GS+GQ +ATVA+VGYTNAGKSTLVSALS++ L+SDDRLFATVDP+LRSVILPSGRKVLLS
Sbjct: 253  GSNGQGLATVAIVGYTNAGKSTLVSALSESDLFSDDRLFATVDPRLRSVILPSGRKVLLS 312

Query: 600  DTVGFISDLPVQLVEAFHATLEEVVEADLIVHVLDSSTPDLDEHRQTVMQVLNQLGVSKE 421
            DTVGFISDLPVQLVEAFHATLEEVVEADL+VHVLDSS  DLDE R  V+QVL Q+GVS+E
Sbjct: 313  DTVGFISDLPVQLVEAFHATLEEVVEADLLVHVLDSSASDLDEQRSVVLQVLQQIGVSEE 372

Query: 420  KLENMIEVWNKIDIXXXXXXXXXXXXXXXXXXEHLXXXXXXXXXXXXXECE--------- 268
            KL+NM+EVWNKID+                                    E         
Sbjct: 373  KLQNMLEVWNKIDLQEEEMGADKYLDNGEDDVVDSLSGAEDDDMPSELPAEPVDDDDEND 432

Query: 267  ------SGDVEGTKNEDEDDYTDGWLASEDLQESWSDNDTSSLGCKNPDDEQQDS----- 121
                  SGDV+ T ++ E DY+DGWL+     E   D+  +    K  DD+Q +S     
Sbjct: 433  IVSELSSGDVQETMDDHEGDYSDGWLSRGG--EGSEDDQGNPSRWKTMDDQQSESFKDRR 490

Query: 120  CTISDNVSQCQPENSSPHVKTSALTGVGLHELLELIDERL 1
             T  D+ SQ Q     PHVKTSA+ GVGL ELL LIDE+L
Sbjct: 491  MTEKDSCSQPQ---CIPHVKTSAVMGVGLQELLALIDEKL 527


>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  507 bits (1306), Expect = e-141
 Identities = 296/518 (57%), Positives = 346/518 (66%), Gaps = 4/518 (0%)
 Frame = -1

Query: 1542 YSQSRLRHREAKSGDSNGNTNTNRDPDSPPKLFVVQPRIRPETVLQSKLKEALNLANSLE 1363
            +SQ+ L  +  K    N  +  NRDP SPPKLFVVQPR+RP+T+LQ+KL EA+NLANSLE
Sbjct: 61   FSQTPLLQK--KEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLE 118

Query: 1362 EQRDGFYDTEFSEKDLPSHIVVQNPASRTT--RADTYFGPGTVDTIKCHVNALDSKDGFD 1189
            EQRDG+YDTE  EK LP H+VVQNPA R++  R+DTYFGPGTVDT+KCH+NA++SK   D
Sbjct: 119  EQRDGYYDTELCEKGLPPHVVVQNPAVRSSKYRSDTYFGPGTVDTVKCHLNAVESKGEID 178

Query: 1188 AVFVNAILSGVQQRNLEQAWGKPVLDRVSLIIEIFNAHAQTXXXXXXXXXXXLMYKRSRL 1009
            AV+VN ILSG+QQRNLE+AWGKPVLDRV LIIEIFNAHAQT           LMYKR+RL
Sbjct: 179  AVYVNTILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAQTKEAKLQAELAALMYKRTRL 238

Query: 1008 VRVRGAGGRYTFGE--ETEVVXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXRNQLLSEI 835
            VRVRG  GRYTFG   ETEVV                GET            RN LLS+I
Sbjct: 239  VRVRGPDGRYTFGATGETEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLLSQI 298

Query: 834  KEVXXXXXXXXXXXXRHGGSDGQDIATVAVVGYTNAGKSTLVSALSDTYLYSDDRLFATV 655
            + V            R GGS+GQ +ATVA+VGYTNAGKSTLVSALS++ L+SDDRLFATV
Sbjct: 299  EAVRRTRALQRASRKRRGGSNGQGLATVAIVGYTNAGKSTLVSALSESDLFSDDRLFATV 358

Query: 654  DPKLRSVILPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLIVHVLDSSTPDLD 475
            DP+LRSVILPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADL+VHVLDSS  DLD
Sbjct: 359  DPRLRSVILPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVLDSSASDLD 418

Query: 474  EHRQTVMQVLNQLGVSKEKLENMIEVWNKIDIXXXXXXXXXXXXXXXXXXEHLXXXXXXX 295
            E R  V+QVL Q+GVS+EKL+NM+EVWNKID+                            
Sbjct: 419  EQRSVVLQVLQQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDDVVDSLSGAEDD 478

Query: 294  XXXXXXECESGDVEGTKNEDEDDYTDGWLASEDLQESWSDNDTSSLGCKNPDDEQQDSCT 115
                    E  D     ++DE+D     L+S D+QE+  D++          D   DSC+
Sbjct: 479  DMPSELPAEPVD-----DDDENDIVSE-LSSGDVQETMDDHE---------GDYSDDSCS 523

Query: 114  ISDNVSQCQPENSSPHVKTSALTGVGLHELLELIDERL 1
                    QP+   PHVKTSA+ GVGL ELL LIDE+L
Sbjct: 524  --------QPQ-CIPHVKTSAVMGVGLQELLALIDEKL 552


>ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like [Cucumis
            sativus]
          Length = 593

 Score =  471 bits (1213), Expect = e-130
 Identities = 281/522 (53%), Positives = 325/522 (62%), Gaps = 19/522 (3%)
 Frame = -1

Query: 1509 KSGDSNGNTNTNRDPDSPPKLFVVQPRIRPETVLQSKLKEALNLANSLEEQRDGFYDTEF 1330
            K  DS+  +  NRD  +PPKLFVVQPR+RP T LQ+KL EAL LANSLEEQRDG++  +F
Sbjct: 59   KKEDSDDLSLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNEALCLANSLEEQRDGYFHIDF 118

Query: 1329 SEKDLPSHIVVQNPASRTTRADTYFGPGTVDTIKCHVNALDSKDGFDAVFVNAILSGVQQ 1150
             +KD+P ++VVQNP+ R  RADTYFGPGTVDTIKCH+NA +SK   DA+FVNA LSG QQ
Sbjct: 119  FDKDVPPYVVVQNPSVRGARADTYFGPGTVDTIKCHLNAAESKSEVDAIFVNATLSGSQQ 178

Query: 1149 RNLEQAWGKPVLDRVSLIIEIFNAHAQTXXXXXXXXXXXLMYKRSRLVRVRGAGGRYTFG 970
            RNLE AW KPVLDRV LIIEIFNAHA T           LMYK+SRLVRVRG  GRY FG
Sbjct: 179  RNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELAALMYKKSRLVRVRGLDGRYAFG 238

Query: 969  E--ETEVVXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXRNQLLSEIKEVXXXXXXXXXX 796
               E EVV                GET            RN L S+I+EV          
Sbjct: 239  ARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLYSQIEEVRRTRSLQRAS 298

Query: 795  XXRHGGSDGQDIATVAVVGYTNAGKSTLVSALSDTYLYSDDRLFATVDPKLRSVILPSGR 616
              RHGGS+GQ +ATVAVVGYTNAGKSTLVSALSD  LYSD RLFATVDP+LRSV LPSGR
Sbjct: 299  RKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLYSDSRLFATVDPRLRSVFLPSGR 358

Query: 615  KVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLIVHVLDSSTPDLDEHRQTVMQVLNQL 436
            KV+LSDTVGFISDLPVQLVEAFHATLEEVVEADL+VHV+D + P+LDEHR TV+QVL Q+
Sbjct: 359  KVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDCTAPNLDEHRSTVLQVLQQI 418

Query: 435  GVSKEKLENMIEVWNKIDIXXXXXXXXXXXXXXXXXXEHL------XXXXXXXXXXXXXE 274
            GVSK KL++M+EVWNKID                    +                    E
Sbjct: 419  GVSKMKLQDMVEVWNKIDYHQEGESIDDSCDDDNGEAANSSGEDSNEGKLSSAGTNNIVE 478

Query: 273  CESGDVE---------GTKNE-DEDDYTDGWLASEDL-QESWSDNDTSSLGCKNPDDEQQ 127
             E GD+          G + E  E D  D WL  +D  Q  W+D                
Sbjct: 479  MEKGDITIKQATEEHLGNRMEGQESDCCDDWLQDDDEDQNPWADKGQG------------ 526

Query: 126  DSCTISDNVSQCQPENSSPHVKTSALTGVGLHELLELIDERL 1
                + ++V Q   + S PHV+ SA  GVGL ELL+LID +L
Sbjct: 527  ----MGEDV-QASLDQSGPHVRISARLGVGLGELLQLIDNKL 563


>ref|XP_003617287.1| GTP-binding protein [Medicago truncatula] gi|355518622|gb|AET00246.1|
            GTP-binding protein [Medicago truncatula]
          Length = 591

 Score =  471 bits (1212), Expect = e-130
 Identities = 285/551 (51%), Positives = 348/551 (63%), Gaps = 6/551 (1%)
 Frame = -1

Query: 1635 MLRAISHTRKSLNKTLIAIHPDSC-LYSPPTWYSQSRLRHREAKSGDSNGNTNTNRDPDS 1459
            MLR +S T +S  + ++      C +Y PP+ YS + +                    D+
Sbjct: 1    MLRNLSATLESTKRKILT--SSKCRIYPPPSPYSTAPV-------------------DDA 39

Query: 1458 PPKLFVVQPRIRPETVLQSKLKEALNLANSLEEQRDGFYDTEFSEKDLPSHIVVQNPASR 1279
            PPKL VVQPR+R E +LQ+KL EAL LANSLE+QRDG++ T+F +  LP H++VQNP+ +
Sbjct: 40   PPKLLVVQPRLRSEKLLQAKLNEALCLANSLEDQRDGYFHTDFFDLPLPPHVIVQNPSLK 99

Query: 1278 --TTRADTYFGPGTVDTIKCHVNALDSKDGFDAVFVNAILSGVQQRNLEQAWGKPVLDRV 1105
                RADTYFGPGTVDTIKCH+NA++SK   DAVFVNAILSG+Q RN+E+AW KPV+DRV
Sbjct: 100  GHKARADTYFGPGTVDTIKCHLNAVESKGEVDAVFVNAILSGIQIRNMERAWNKPVVDRV 159

Query: 1104 SLIIEIFNAHAQTXXXXXXXXXXXLMYKRSRLVRVRGAGGRYTFGE--ETEVVXXXXXXX 931
             LIIEIFNAHA T           L YK+SRLVRV G  GR TFG   E EVV       
Sbjct: 160  GLIIEIFNAHAFTKEAKLQAELAALSYKKSRLVRVLGPNGRLTFGGSGEAEVVSARGRGS 219

Query: 930  XXXXXXXXXGETXXXXXXXXXXXXRNQLLSEIKEVXXXXXXXXXXXXRHGGSDGQDIATV 751
                     GET            RN LL++I+EV            R GGS  Q +AT+
Sbjct: 220  GGQGFMSGAGETELQLQRRRLLDRRNYLLTQIEEVRRTRAVQRAGRKRQGGSSAQRLATI 279

Query: 750  AVVGYTNAGKSTLVSALSDTYLYSDDRLFATVDPKLRSVILPSGRKVLLSDTVGFISDLP 571
            AVVGYTNAGKSTLVS L+D+ LYSD RLFATVDP+LRS +LPSGRKVL SDTVGFISDLP
Sbjct: 280  AVVGYTNAGKSTLVSNLTDSDLYSDCRLFATVDPRLRSAVLPSGRKVLFSDTVGFISDLP 339

Query: 570  VQLVEAFHATLEEVVEADLIVHVLDSSTPDLDEHRQTVMQVLNQLGVSKEKLENMIEVWN 391
            V+LVEAFHATLEEVVEADL+VHV+DS+ P+L+EHR TV QVL Q+GVS+EKL+NMIEVWN
Sbjct: 340  VKLVEAFHATLEEVVEADLLVHVVDSTAPNLEEHRTTVFQVLQQIGVSQEKLQNMIEVWN 399

Query: 390  KIDIXXXXXXXXXXXXXXXXXXEHLXXXXXXXXXXXXXECESGDVEGTKNEDEDDYTDGW 211
            KID                   EHL               E  ++E T  E+++DY+DGW
Sbjct: 400  KID------AEEEFTDVDENVDEHLNEDEEADETSSIDGEEDVNIE-TLTEEKEDYSDGW 452

Query: 210  LASEDLQESWSDNDTSSLGCKNPDDEQQDSCTISDNVSQCQPE-NSSPHVKTSALTGVGL 34
            L  ED   +  D    S    +  D+Q +S    ++V        SSPHVKTSA+TGVGL
Sbjct: 453  LYEEDTVLNEGDFCLPS----SAADQQIESSNKDNSVENAGAMLPSSPHVKTSAITGVGL 508

Query: 33   HELLELIDERL 1
             EL+ELIDE+L
Sbjct: 509  QELMELIDEKL 519


>ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At3g49725,
            chloroplastic-like [Cucumis sativus]
          Length = 631

 Score =  466 bits (1198), Expect = e-128
 Identities = 279/522 (53%), Positives = 323/522 (61%), Gaps = 19/522 (3%)
 Frame = -1

Query: 1509 KSGDSNGNTNTNRDPDSPPKLFVVQPRIRPETVLQSKLKEALNLANSLEEQRDGFYDTEF 1330
            K  DS+  +  NRD  +PPKLFVVQPR+RP T LQ+KL EAL LANSLEEQRDG++  +F
Sbjct: 59   KKEDSDDLSLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNEALCLANSLEEQRDGYFHIDF 118

Query: 1329 SEKDLPSHIVVQNPASRTTRADTYFGPGTVDTIKCHVNALDSKDGFDAVFVNAILSGVQQ 1150
             +KD+P ++VVQNP+ R  RADTYFGPGTVDTIKCH+NA +SK     +FVNA LSG QQ
Sbjct: 119  FDKDVPPYVVVQNPSVRGARADTYFGPGTVDTIKCHLNAAESKVXSRCIFVNATLSGSQQ 178

Query: 1149 RNLEQAWGKPVLDRVSLIIEIFNAHAQTXXXXXXXXXXXLMYKRSRLVRVRGAGGRYTFG 970
            RNLE AW KPVLDRV LIIEIFNAHA T           LMYK+SRLVRVRG  GRY FG
Sbjct: 179  RNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELAALMYKKSRLVRVRGLDGRYAFG 238

Query: 969  E--ETEVVXXXXXXXXXXXXXXXXGETXXXXXXXXXXXXRNQLLSEIKEVXXXXXXXXXX 796
               E EVV                GET            RN L S+I+EV          
Sbjct: 239  ARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLYSQIEEVRRTRSLQRAS 298

Query: 795  XXRHGGSDGQDIATVAVVGYTNAGKSTLVSALSDTYLYSDDRLFATVDPKLRSVILPSGR 616
              RHGGS+GQ +ATVAVVGYTNAGKSTLVSALSD  LYSD RLFATVDP+LRSV LPSGR
Sbjct: 299  RKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLYSDSRLFATVDPRLRSVFLPSGR 358

Query: 615  KVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLIVHVLDSSTPDLDEHRQTVMQVLNQL 436
            KV+LSDTVGFISDLPVQLVEAFHATLEEVVEADL+VHV+D + P+LDEHR TV+QVL Q+
Sbjct: 359  KVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDCTAPNLDEHRSTVLQVLQQI 418

Query: 435  GVSKEKLENMIEVWNKIDIXXXXXXXXXXXXXXXXXXEHL------XXXXXXXXXXXXXE 274
            GVSK KL++M+EVWNKID                    +                    E
Sbjct: 419  GVSKMKLQDMVEVWNKIDYHQEGESIDDSCDDDNGEAANSSGEDSNEGKLSSAGTNNIVE 478

Query: 273  CESGDVE---------GTKNE-DEDDYTDGWLASEDL-QESWSDNDTSSLGCKNPDDEQQ 127
             E GD+          G + E  E D  D WL  +D  Q  W+D                
Sbjct: 479  MEKGDITIKQATEEHLGNRMEGQESDCCDDWLQDDDEDQNPWADKGQG------------ 526

Query: 126  DSCTISDNVSQCQPENSSPHVKTSALTGVGLHELLELIDERL 1
                + ++V Q   + S PHV+ SA  GVGL ELL+LID +L
Sbjct: 527  ----MGEDV-QASLDQSGPHVRISARLGVGLGELLQLIDNKL 563