BLASTX nr result

ID: Bupleurum21_contig00011572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011572
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281297.1| PREDICTED: AP-2 complex subunit mu [Vitis vi...   468   e-130
ref|XP_002329568.1| predicted protein [Populus trichocarpa] gi|1...   467   e-129
ref|XP_004148486.1| PREDICTED: AP-2 complex subunit mu-like [Cuc...   466   e-129
ref|XP_002454449.1| hypothetical protein SORBIDRAFT_04g031270 [S...   464   e-129
ref|NP_001047793.1| Os02g0690700 [Oryza sativa Japonica Group] g...   463   e-128

>ref|XP_002281297.1| PREDICTED: AP-2 complex subunit mu [Vitis vinifera]
           gi|297742129|emb|CBI33916.3| unnamed protein product
           [Vitis vinifera]
          Length = 438

 Score =  468 bits (1204), Expect = e-130
 Identities = 236/257 (91%), Positives = 238/257 (92%)
 Frame = +3

Query: 3   QIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 182
           QIGGCSFFYMR                   FKFVVEAVALFKSYFGGAFDEDAIRNNFVL
Sbjct: 52  QIGGCSFFYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 111

Query: 183 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADKPVPNATLQVTGAVGWRRE 362
           IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKP+DKPVPNATLQVTGAVGWRRE
Sbjct: 112 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRRE 171

Query: 363 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEK 542
           GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGK+LMKCFLSGMPDLKLGLNDKIGLEK
Sbjct: 172 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEK 231

Query: 543 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 722
           ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP
Sbjct: 232 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 291

Query: 723 FRVLPTIKELGRTRMEV 773
           FRVLPTIKELGRTRMEV
Sbjct: 292 FRVLPTIKELGRTRMEV 308


>ref|XP_002329568.1| predicted protein [Populus trichocarpa] gi|118485142|gb|ABK94434.1|
           unknown [Populus trichocarpa]
           gi|222870277|gb|EEF07408.1| predicted protein [Populus
           trichocarpa]
          Length = 438

 Score =  467 bits (1201), Expect = e-129
 Identities = 236/257 (91%), Positives = 237/257 (92%)
 Frame = +3

Query: 3   QIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 182
           QIGGCSFFYMR                   FKFVVEAVALFKSYFGGAFDEDAIRNNFVL
Sbjct: 52  QIGGCSFFYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 111

Query: 183 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADKPVPNATLQVTGAVGWRRE 362
           IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKP DKPVPNATLQVTGAVGWRRE
Sbjct: 112 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRRE 171

Query: 363 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEK 542
           GLVYKKNEVFLDIVESVNLLMSSKG+VLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEK
Sbjct: 172 GLVYKKNEVFLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEK 231

Query: 543 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 722
           ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP
Sbjct: 232 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 291

Query: 723 FRVLPTIKELGRTRMEV 773
           FRVLPTIKELGRTRMEV
Sbjct: 292 FRVLPTIKELGRTRMEV 308


>ref|XP_004148486.1| PREDICTED: AP-2 complex subunit mu-like [Cucumis sativus]
          Length = 438

 Score =  466 bits (1199), Expect = e-129
 Identities = 235/257 (91%), Positives = 237/257 (92%)
 Frame = +3

Query: 3   QIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 182
           QIGGCSFFYMR                   FKFVVEAVALFKSYFGGAFDEDAIRNNFVL
Sbjct: 52  QIGGCSFFYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 111

Query: 183 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADKPVPNATLQVTGAVGWRRE 362
           IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKP+DKPVPNATLQVTGAVGWRRE
Sbjct: 112 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRRE 171

Query: 363 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEK 542
           GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGK+LMKCFLSGMPDLKLGLNDKIGLEK
Sbjct: 172 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEK 231

Query: 543 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 722
           ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP
Sbjct: 232 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 291

Query: 723 FRVLPTIKELGRTRMEV 773
           FRVLPTIKELGRT MEV
Sbjct: 292 FRVLPTIKELGRTHMEV 308


>ref|XP_002454449.1| hypothetical protein SORBIDRAFT_04g031270 [Sorghum bicolor]
           gi|241934280|gb|EES07425.1| hypothetical protein
           SORBIDRAFT_04g031270 [Sorghum bicolor]
          Length = 438

 Score =  464 bits (1194), Expect = e-129
 Identities = 233/257 (90%), Positives = 237/257 (92%)
 Frame = +3

Query: 3   QIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 182
           QIGGCSF YMR                   FKFVVEAVALFKSYFGGAFDEDAIRNNFVL
Sbjct: 52  QIGGCSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 111

Query: 183 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADKPVPNATLQVTGAVGWRRE 362
           IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKP+DKPVPNATLQVTGAVGWRRE
Sbjct: 112 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRRE 171

Query: 363 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEK 542
           GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGK+LMKCFLSGMPDLKLGLNDKIGLEK
Sbjct: 172 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEK 231

Query: 543 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 722
           E+QLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP
Sbjct: 232 EAQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 291

Query: 723 FRVLPTIKELGRTRMEV 773
           FRVLPTIKELGRTRME+
Sbjct: 292 FRVLPTIKELGRTRMEI 308


>ref|NP_001047793.1| Os02g0690700 [Oryza sativa Japonica Group]
           gi|41052815|dbj|BAD07683.1| putative Clathrin coat
           assembly protein AP50 [Oryza sativa Japonica Group]
           gi|113537324|dbj|BAF09707.1| Os02g0690700 [Oryza sativa
           Japonica Group] gi|125583313|gb|EAZ24244.1| hypothetical
           protein OsJ_07994 [Oryza sativa Japonica Group]
           gi|215717146|dbj|BAG95509.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218191390|gb|EEC73817.1| hypothetical protein
           OsI_08536 [Oryza sativa Indica Group]
          Length = 438

 Score =  463 bits (1191), Expect = e-128
 Identities = 232/257 (90%), Positives = 237/257 (92%)
 Frame = +3

Query: 3   QIGGCSFFYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 182
           QIGGCSF YMR                   FKFVVEAVALFKSYFGGAFDEDAIRNNFVL
Sbjct: 52  QIGGCSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVL 111

Query: 183 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADKPVPNATLQVTGAVGWRRE 362
           IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKP+DKPVPNATLQVTGAVGWRRE
Sbjct: 112 IYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRRE 171

Query: 363 GLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEK 542
           GL+YKKNEVFLDIVESVNLLMSSKGSVLRCDVTGK+LMKCFLSGMPDLKLGLNDKIGLEK
Sbjct: 172 GLMYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEK 231

Query: 543 ESQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 722
           E+QLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP
Sbjct: 232 EAQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 291

Query: 723 FRVLPTIKELGRTRMEV 773
           FRVLPTIKELGRTRME+
Sbjct: 292 FRVLPTIKELGRTRMEI 308


Top