BLASTX nr result

ID: Bupleurum21_contig00011544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011544
         (1193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514832.1| conserved hypothetical protein [Ricinus comm...   220   6e-55
ref|XP_002328967.1| predicted protein [Populus trichocarpa] gi|2...   207   3e-51
emb|CBI17612.3| unnamed protein product [Vitis vinifera]              205   2e-50
ref|XP_002277168.1| PREDICTED: uncharacterized protein LOC100263...   205   2e-50
gb|AFK49033.1| unknown [Lotus japonicus]                              202   1e-49

>ref|XP_002514832.1| conserved hypothetical protein [Ricinus communis]
            gi|223545883|gb|EEF47386.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 312

 Score =  220 bits (560), Expect = 6e-55
 Identities = 118/166 (71%), Positives = 131/166 (78%), Gaps = 6/166 (3%)
 Frame = -3

Query: 1068 PVTPLRHRRR-TSTGYFSTFRRHTK-----LSVRVTNDSSRTELISNPTSEESEVDKIVD 907
            P T   HRR   S   F++FR  T        +RVTNDS+RTEL S+     SE DKIVD
Sbjct: 26   PATGGLHRRSFPSKCIFTSFRPSTSSPRYPFLLRVTNDSNRTELSSDVAVGRSEADKIVD 85

Query: 906  GMDFGELCNEFECISSPSVEATARQLARDILELRQGNRALGTFAVSVKYSDPLRSFTGRE 727
            GMDFGELCNEFECISSP VEATARQLARDILELR+GNRALGTFAVSV+Y DP+RSFTGRE
Sbjct: 86   GMDFGELCNEFECISSPLVEATARQLARDILELREGNRALGTFAVSVRYKDPVRSFTGRE 145

Query: 726  KYKRALWATGALKDPIVAVQDMSMSSTSMLNIKWTLKGKPKSFLAS 589
            KYKR LW TGAL +P VAVQ+M M STS+L+IKWT+KGKPKSFLAS
Sbjct: 146  KYKRPLWVTGALDNPSVAVQEMVMLSTSVLSIKWTIKGKPKSFLAS 191



 Score =  147 bits (370), Expect = 7e-33
 Identities = 68/97 (70%), Positives = 83/97 (85%)
 Frame = -2

Query: 466 EHKEFWDLSASSAIAQAYFWSSRRLFSTVEFLKDITDSAKNLSSRFQTNKENTEIYPDPL 287
           EH+E WDLSASS IAQA+FW+SRRLF+T+E  KD++D  KNL++R    +EN EI+PDP 
Sbjct: 215 EHEEVWDLSASSPIAQAFFWTSRRLFATLETGKDLSDFVKNLTTRLPAERENLEIFPDPS 274

Query: 286 GDPTKFFQRDDSFQRDAYQIALVLALLYFVVQFLKST 176
           GDPTKFFQRDD FQRDAYQIAL LA++YFVVQFL++T
Sbjct: 275 GDPTKFFQRDDGFQRDAYQIALFLAVIYFVVQFLRTT 311


>ref|XP_002328967.1| predicted protein [Populus trichocarpa] gi|222839201|gb|EEE77552.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  207 bits (528), Expect = 3e-51
 Identities = 112/181 (61%), Positives = 133/181 (73%), Gaps = 6/181 (3%)
 Frame = -3

Query: 1116 SSTCAVRXXXXPSFISPVTPLRHRRRTSTGYFSTFRR-----HTKLSVRVTNDSSRTELI 952
            S + A+      S  +P +  R   R+S  +  T R      H    +RVTNDSSRTEL 
Sbjct: 4    SVSSALAASSTSSLATPGSFHRQCCRSSNRFIFTCRPFTSSLHHPFILRVTNDSSRTELS 63

Query: 951  -SNPTSEESEVDKIVDGMDFGELCNEFECISSPSVEATARQLARDILELRQGNRALGTFA 775
             + P +E SE D+IV GMDFGELCNEFECISSP VE+TARQL RDIL+LR+GNRALGTFA
Sbjct: 64   PAEPANESSEADRIVGGMDFGELCNEFECISSPLVESTARQLVRDILQLREGNRALGTFA 123

Query: 774  VSVKYSDPLRSFTGREKYKRALWATGALKDPIVAVQDMSMSSTSMLNIKWTLKGKPKSFL 595
            VSV+Y DP+RSFTGREKYKR LWATGAL +P V VQ+M M STS+L+IKWT+ GKPKSF+
Sbjct: 124  VSVRYKDPVRSFTGREKYKRPLWATGALDNPSVTVQEMIMLSTSILSIKWTITGKPKSFI 183

Query: 594  A 592
            A
Sbjct: 184  A 184



 Score =  147 bits (370), Expect = 7e-33
 Identities = 68/97 (70%), Positives = 84/97 (86%)
 Frame = -2

Query: 466 EHKEFWDLSASSAIAQAYFWSSRRLFSTVEFLKDITDSAKNLSSRFQTNKENTEIYPDPL 287
           EH+EFWDLSASS + QA+FW+SRRLF+T+E  KD++D  K+L++R  +  EN EIYPDP 
Sbjct: 209 EHEEFWDLSASSVVDQAFFWTSRRLFATIENGKDLSDLVKSLTNRPSSKNENMEIYPDPS 268

Query: 286 GDPTKFFQRDDSFQRDAYQIALVLALLYFVVQFLKST 176
           GDPTKFFQ+DDSFQRDAYQIAL LA+LYFVVQFL++T
Sbjct: 269 GDPTKFFQKDDSFQRDAYQIALFLAVLYFVVQFLRTT 305


>emb|CBI17612.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  205 bits (522), Expect = 2e-50
 Identities = 110/178 (61%), Positives = 125/178 (70%), Gaps = 4/178 (2%)
 Frame = -3

Query: 1110 TCAVRXXXXPSFISPVTPLRHRRRTSTGYFSTFRRHTKLS----VRVTNDSSRTELISNP 943
            T A       S   P + +   ++  T  F     H  L     ++VTND +R     + 
Sbjct: 48   TSATTFSAAGSLCRPFSCILFSKQPPTASFLLHHHHHHLHHPFPLKVTNDPNRRTAEVSI 107

Query: 942  TSEESEVDKIVDGMDFGELCNEFECISSPSVEATARQLARDILELRQGNRALGTFAVSVK 763
             SE SE DKIVDGMDFGELCNEFECISSP VE+TARQLARDILELR+GNRALGTFAVSVK
Sbjct: 108  ESERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARDILELREGNRALGTFAVSVK 167

Query: 762  YSDPLRSFTGREKYKRALWATGALKDPIVAVQDMSMSSTSMLNIKWTLKGKPKSFLAS 589
            Y DP+RSFTGREKYKR LW T AL DP V VQ+M M STS+L+IKWT+KGKPKS LAS
Sbjct: 168  YKDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSVLSIKWTIKGKPKSLLAS 225



 Score =  155 bits (392), Expect = 2e-35
 Identities = 75/97 (77%), Positives = 81/97 (83%)
 Frame = -2

Query: 466 EHKEFWDLSASSAIAQAYFWSSRRLFSTVEFLKDITDSAKNLSSRFQTNKENTEIYPDPL 287
           EH+EFWDLSASSAIAQAYFW+SRRLF+  E  KD  DS KN  SR  T KEN EIYPDP 
Sbjct: 249 EHEEFWDLSASSAIAQAYFWASRRLFAATEAGKDFADSVKNWGSRLSTEKENLEIYPDPS 308

Query: 286 GDPTKFFQRDDSFQRDAYQIALVLALLYFVVQFLKST 176
           GDPTKFFQRDDSFQRD YQIAL LA+LYFVVQFL++T
Sbjct: 309 GDPTKFFQRDDSFQRDFYQIALFLAVLYFVVQFLRTT 345


>ref|XP_002277168.1| PREDICTED: uncharacterized protein LOC100263239 [Vitis vinifera]
          Length = 301

 Score =  205 bits (522), Expect = 2e-50
 Identities = 110/178 (61%), Positives = 125/178 (70%), Gaps = 4/178 (2%)
 Frame = -3

Query: 1110 TCAVRXXXXPSFISPVTPLRHRRRTSTGYFSTFRRHTKLS----VRVTNDSSRTELISNP 943
            T A       S   P + +   ++  T  F     H  L     ++VTND +R     + 
Sbjct: 3    TSATTFSAAGSLCRPFSCILFSKQPPTASFLLHHHHHHLHHPFPLKVTNDPNRRTAEVSI 62

Query: 942  TSEESEVDKIVDGMDFGELCNEFECISSPSVEATARQLARDILELRQGNRALGTFAVSVK 763
             SE SE DKIVDGMDFGELCNEFECISSP VE+TARQLARDILELR+GNRALGTFAVSVK
Sbjct: 63   ESERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARDILELREGNRALGTFAVSVK 122

Query: 762  YSDPLRSFTGREKYKRALWATGALKDPIVAVQDMSMSSTSMLNIKWTLKGKPKSFLAS 589
            Y DP+RSFTGREKYKR LW T AL DP V VQ+M M STS+L+IKWT+KGKPKS LAS
Sbjct: 123  YKDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSVLSIKWTIKGKPKSLLAS 180



 Score =  155 bits (392), Expect = 2e-35
 Identities = 75/97 (77%), Positives = 81/97 (83%)
 Frame = -2

Query: 466 EHKEFWDLSASSAIAQAYFWSSRRLFSTVEFLKDITDSAKNLSSRFQTNKENTEIYPDPL 287
           EH+EFWDLSASSAIAQAYFW+SRRLF+  E  KD  DS KN  SR  T KEN EIYPDP 
Sbjct: 204 EHEEFWDLSASSAIAQAYFWASRRLFAATEAGKDFADSVKNWGSRLSTEKENLEIYPDPS 263

Query: 286 GDPTKFFQRDDSFQRDAYQIALVLALLYFVVQFLKST 176
           GDPTKFFQRDDSFQRD YQIAL LA+LYFVVQFL++T
Sbjct: 264 GDPTKFFQRDDSFQRDFYQIALFLAVLYFVVQFLRTT 300


>gb|AFK49033.1| unknown [Lotus japonicus]
          Length = 309

 Score =  202 bits (515), Expect = 1e-49
 Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 2/142 (1%)
 Frame = -3

Query: 1011 RRHTKLSVRVTNDSSRTELISNPTSEES--EVDKIVDGMDFGELCNEFECISSPSVEATA 838
            + H    +RV ND+ RTEL S+  +E S  +VDKIVDG+DFGELCN+FECISSP VE+TA
Sbjct: 46   QHHHSFLLRVANDADRTELPSDAATETSYSDVDKIVDGLDFGELCNDFECISSPLVESTA 105

Query: 837  RQLARDILELRQGNRALGTFAVSVKYSDPLRSFTGREKYKRALWATGALKDPIVAVQDMS 658
            RQL RDILELR+GNRALGTFA SV+Y DP+RSFTGR+KYKR+LWAT AL++P V VQ+M 
Sbjct: 106  RQLVRDILELREGNRALGTFAFSVRYKDPIRSFTGRDKYKRSLWATSALENPSVTVQEMV 165

Query: 657  MSSTSMLNIKWTLKGKPKSFLA 592
            M STS+L+IKWT+KGKPKSF+A
Sbjct: 166  MLSTSVLSIKWTMKGKPKSFIA 187



 Score =  156 bits (395), Expect = 8e-36
 Identities = 73/97 (75%), Positives = 86/97 (88%)
 Frame = -2

Query: 466 EHKEFWDLSASSAIAQAYFWSSRRLFSTVEFLKDITDSAKNLSSRFQTNKENTEIYPDPL 287
           EH+EFWDLSASSA A A+FW+SR LF+TVE +KD+ DSAKN+SS F++ KEN EIYPDP 
Sbjct: 212 EHEEFWDLSASSASAHAFFWTSRALFATVESVKDLGDSAKNMSSNFESEKENLEIYPDPS 271

Query: 286 GDPTKFFQRDDSFQRDAYQIALVLALLYFVVQFLKST 176
           GDPTKFFQRDDSFQ+D YQIAL LA+LYFVVQFL++T
Sbjct: 272 GDPTKFFQRDDSFQQDVYQIALFLAILYFVVQFLRTT 308


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