BLASTX nr result

ID: Bupleurum21_contig00011525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011525
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4...   424   e-116
ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4...   409   e-112
ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4...   407   e-111
ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|2...   396   e-108
ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105

>ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
            gi|147807233|emb|CAN61950.1| hypothetical protein
            VITISV_002189 [Vitis vinifera]
          Length = 378

 Score =  424 bits (1090), Expect = e-116
 Identities = 228/359 (63%), Positives = 275/359 (76%), Gaps = 1/359 (0%)
 Frame = +1

Query: 91   TSSDGDSPRTPYS-VHETLRLLQSDDLFSKIEAAKQIRRLSKTSQRNRRHFSSAIISLVD 267
            T SD D+PRT  + V+ TL LLQSDD  S+I+AAK+IRRL+KTSQ+ RR  S A+  LV 
Sbjct: 10   TPSDPDTPRTATTAVNRTLHLLQSDDPDSQIQAAKEIRRLTKTSQKCRRQLSPAVRPLVS 69

Query: 268  MLRSDSVESAQSXXXXXXXXXVKDEKNKISIVDAGALEPIISFLHSECTNMHEHXXXXXX 447
            MLR DS++S ++         VKDEKNK++IV +GALEPIISFL S+ +NM E+      
Sbjct: 70   MLRLDSLDSNEAALLALLNLAVKDEKNKVNIVASGALEPIISFLQSQNSNMQEYATASLL 129

Query: 448  XXXXXXINKPAIVASGVIPLLSNILRHGSPQAKVDALMALYNLSTHPDYRKLILQAEPIP 627
                  INKP I A+G IPLL  ILRHGSPQA+VDA++ALYNLST+ D   +IL+A+PIP
Sbjct: 130  TLSASTINKPTISAAGAIPLLVEILRHGSPQARVDAVLALYNLSTYSDNISIILEAKPIP 189

Query: 628  AIVNXXXXXXXXXXXXXXXXXXIESLVESEEARTALTSEEGGVLAIVEVLESGSLQSREH 807
            +IV+                  IESLV  +E RTALTSEEGGVLA+VEVLE+GSLQSREH
Sbjct: 190  SIVDLLKTCKKSSKTTEKCSALIESLVAFDEGRTALTSEEGGVLAVVEVLENGSLQSREH 249

Query: 808  ALSTLLTMCEIDRCKYREPILQEGVIPGLLELTVQGTPKCQLKAKTLLRLLRDSPYPRTD 987
            A+  LLTMC+ DRCKYREPIL+EGVIPGLLELTVQGTPK Q KA+TLLRLLRDSP+PR++
Sbjct: 250  AVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKAQTLLRLLRDSPHPRSE 309

Query: 988  IQAETLENMVCSLISQIDVNEQSGKAKQMLTDMVQVSMEQSLRHLQQRAMVCTPADLPI 1164
            +Q +TLEN+VC+LISQID  +QS KAK+ML +MVQVSMEQSLRHLQQRA+VCTP DLPI
Sbjct: 310  LQPDTLENIVCNLISQIDSEDQSRKAKKMLAEMVQVSMEQSLRHLQQRAVVCTPTDLPI 368


>ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 384

 Score =  409 bits (1051), Expect = e-112
 Identities = 227/377 (60%), Positives = 272/377 (72%), Gaps = 5/377 (1%)
 Frame = +1

Query: 49   MDSPISSDTYLAAGTSSDG-----DSPRTPYSVHETLRLLQSDDLFSKIEAAKQIRRLSK 213
            M+SP S    L+  +SSDG     + PRTP +V   L+LL S D   +++AA+ IRRL+K
Sbjct: 1    MESPHS----LSPSSSSDGVGFETEEPRTPLAVRRALQLLNSGDPDLRLQAARDIRRLTK 56

Query: 214  TSQRNRRHFSSAIISLVDMLRSDSVESAQSXXXXXXXXXVKDEKNKISIVDAGALEPIIS 393
            TSQR RR  S A+  LV MLR DS ES +          VKDEKNKI+IV+AGALEPIIS
Sbjct: 57   TSQRCRRQLSQAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPIIS 116

Query: 394  FLHSECTNMHEHXXXXXXXXXXXXINKPAIVASGVIPLLSNILRHGSPQAKVDALMALYN 573
            FL S+  N+ E              NKP I A GVIPLL  ILR GS QAK DA+MAL N
Sbjct: 117  FLKSQNLNLQESATASLLTLSASSTNKPIISACGVIPLLVQILRDGSHQAKADAVMALSN 176

Query: 574  LSTHPDYRKLILQAEPIPAIVNXXXXXXXXXXXXXXXXXXIESLVESEEARTALTSEEGG 753
            LSTH +   +IL+  PIP +V+                  IESLV+ +E RTALTSEEGG
Sbjct: 177  LSTHTNNLSIILETNPIPYMVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGG 236

Query: 754  VLAIVEVLESGSLQSREHALSTLLTMCEIDRCKYREPILQEGVIPGLLELTVQGTPKCQL 933
            VLA+VEVLESG+LQSREHA+  LLTMC+ DRCKYREPIL+EGVIPGLLELTVQGTPK Q 
Sbjct: 237  VLAVVEVLESGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQS 296

Query: 934  KAKTLLRLLRDSPYPRTDIQAETLENMVCSLISQIDVNEQSGKAKQMLTDMVQVSMEQSL 1113
            KA+TLL+LLR+SPYPR++IQ +TLEN+VC++ISQID ++QSGKAK+ML +MVQVSMEQSL
Sbjct: 297  KARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSL 356

Query: 1114 RHLQQRAMVCTPADLPI 1164
            RHLQQRA+VCTP+DLPI
Sbjct: 357  RHLQQRALVCTPSDLPI 373


>ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 392

 Score =  407 bits (1047), Expect = e-111
 Identities = 222/371 (59%), Positives = 269/371 (72%), Gaps = 1/371 (0%)
 Frame = +1

Query: 55   SPISSDTYLAAGTSS-DGDSPRTPYSVHETLRLLQSDDLFSKIEAAKQIRRLSKTSQRNR 231
            S  SS +Y + G +  + + PRTP +V   L+LL S     +++AA+ IRRL+KTSQR R
Sbjct: 11   SSSSSSSYSSDGVAGFETEEPRTPLAVRRALQLLNSGQPDLRLQAARDIRRLTKTSQRCR 70

Query: 232  RHFSSAIISLVDMLRSDSVESAQSXXXXXXXXXVKDEKNKISIVDAGALEPIISFLHSEC 411
            R  S A+  LV MLR DS ES +          VKDEKNKI+IV+AGALEPIISFL S+ 
Sbjct: 71   RQLSEAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPIISFLKSQN 130

Query: 412  TNMHEHXXXXXXXXXXXXINKPAIVASGVIPLLSNILRHGSPQAKVDALMALYNLSTHPD 591
             N+ E              NKP I A G IPLL  ILR GSPQAK +A+MAL NLSTHP+
Sbjct: 131  LNLQESATASLLTLSASSTNKPIISACGAIPLLVKILRDGSPQAKAEAVMALSNLSTHPN 190

Query: 592  YRKLILQAEPIPAIVNXXXXXXXXXXXXXXXXXXIESLVESEEARTALTSEEGGVLAIVE 771
              ++IL+  PIP IV+                  IESLV+ +E RTALTSEEGGVLA+VE
Sbjct: 191  NLRIILKTNPIPFIVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVE 250

Query: 772  VLESGSLQSREHALSTLLTMCEIDRCKYREPILQEGVIPGLLELTVQGTPKCQLKAKTLL 951
            VLE G+LQSREHA+  LLTMC+ DRCKYREPIL+EGVIPGLLELTVQGTPK Q KA++LL
Sbjct: 251  VLEIGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARSLL 310

Query: 952  RLLRDSPYPRTDIQAETLENMVCSLISQIDVNEQSGKAKQMLTDMVQVSMEQSLRHLQQR 1131
            +LLR+SPYPR++IQ +TLEN+VCS+ISQID ++QSGKAK+ML +MVQVSMEQSLRHLQQR
Sbjct: 311  QLLRESPYPRSEIQPDTLENIVCSIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQR 370

Query: 1132 AMVCTPADLPI 1164
            A+VCTP+DLPI
Sbjct: 371  ALVCTPSDLPI 381


>ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|222848168|gb|EEE85715.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  396 bits (1017), Expect = e-108
 Identities = 228/380 (60%), Positives = 275/380 (72%), Gaps = 8/380 (2%)
 Frame = +1

Query: 49   MDSPISS--DTYLAAGTSSDGDSPRTPYS-VHETLRLLQSDDLFSKIEAAKQIRRLSKTS 219
            M+SP SS       + +SS+ D+P +P + V   L L+QSDDL  KIEAAK+IRRL+KTS
Sbjct: 1    MNSPPSSCSSALTHSTSSSNTDTPPSPSAAVCRALLLIQSDDLSLKIEAAKEIRRLTKTS 60

Query: 220  QRNRRHFSSAIISLVDMLR---SDSVESAQSXXXXXXXXXVKDEKNKISIVDAGALEPII 390
            QR RR  + A+  LV MLR    DSVE+ +S         VKDEKNKISIV+AGALE II
Sbjct: 61   QRCRRQLADAVKPLVCMLRVGDDDSVEN-ESALLALLNLAVKDEKNKISIVEAGALESII 119

Query: 391  SFLHSECTNMHEHXXXXXXXXXXXXINKPAIVASGVIPLLSNILRHGSPQAKVDALMALY 570
            SFL S+ + + E+            INKP I A G IPLL  ILR+G  QAKVDA+MAL 
Sbjct: 120  SFLQSQNSILQEYATASLLTLSASTINKPVISACGAIPLLVEILRNGITQAKVDAVMALS 179

Query: 571  NLSTHPDYRKLILQAEPIPAIVNXXXXXXXXXXXXXXXXXXIESLVESEEARTALTSEEG 750
            NLSTH D   +IL+  PIP+IV+                  IESLV  +E R ALTSEEG
Sbjct: 180  NLSTHSDNLDIILKTNPIPSIVSLLKTCKKSSKTAEKCCALIESLVGFDEGRIALTSEEG 239

Query: 751  GVLAIVEVLESGSLQSREHALSTLLTMCEIDRCKYREPILQEGVIPGLLELTVQGTPKCQ 930
            G+LA++EVLE+GSLQSREHA+  LLT+C+ DRCKYREPIL+EGVIPGLLELTVQGTPK Q
Sbjct: 240  GILAVIEVLENGSLQSREHAVGALLTLCQSDRCKYREPILREGVIPGLLELTVQGTPKSQ 299

Query: 931  LKAKTLLRLLRDSPYPRTDIQAETLENMVCSLISQIDVNEQSGKAKQMLTDMVQVSMEQS 1110
             KA+TLLRLLRD+PYPR+++Q +TLEN+VC++ISQID +EQSGKAK+ML +MVQVSMEQS
Sbjct: 300  SKAQTLLRLLRDTPYPRSELQPDTLENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQS 359

Query: 1111 LRHLQQRAMVCTPA--DLPI 1164
            LRHLQQRA+VCTP   DLPI
Sbjct: 360  LRHLQQRALVCTPTPNDLPI 379


>ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|222844682|gb|EEE82229.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  387 bits (993), Expect = e-105
 Identities = 217/368 (58%), Positives = 263/368 (71%), Gaps = 3/368 (0%)
 Frame = +1

Query: 55   SPISSDTYLAAGTSSDGDSPRTPYSVHETLRLLQSDDLFSKIEAAKQIRRLSKTSQRNRR 234
            S  SS T+ +  +S     P +  +V   LRL+QS+DL  KIEAAK IRRL+KTSQR RR
Sbjct: 9    SSSSSHTHYSTSSSDTDTPPSSSAAVRRALRLIQSEDLSLKIEAAKDIRRLTKTSQRCRR 68

Query: 235  HFSSAIISLVDMLR---SDSVESAQSXXXXXXXXXVKDEKNKISIVDAGALEPIISFLHS 405
              + A+  LV MLR    DSVE ++S         VKDEKNKISIV+AGALEPIISFL S
Sbjct: 69   QLADAVKPLVCMLRVGDDDSVELSESALLALLNLAVKDEKNKISIVEAGALEPIISFLKS 128

Query: 406  ECTNMHEHXXXXXXXXXXXXINKPAIVASGVIPLLSNILRHGSPQAKVDALMALYNLSTH 585
            + + + E             INK  I A+G IPLL +ILR+G+ QAKVDA+MAL NLSTH
Sbjct: 129  QNSILRECATASLLTLSASSINKQVISATGAIPLLVDILRNGNTQAKVDAVMALSNLSTH 188

Query: 586  PDYRKLILQAEPIPAIVNXXXXXXXXXXXXXXXXXXIESLVESEEARTALTSEEGGVLAI 765
             +   +IL+  PIP+IV+                  IESLV   E RTALTSEEGG+LA+
Sbjct: 189  SNNLDIILKTNPIPSIVSLLKTCKKSSKTAEKCCALIESLVGFHEGRTALTSEEGGILAV 248

Query: 766  VEVLESGSLQSREHALSTLLTMCEIDRCKYREPILQEGVIPGLLELTVQGTPKCQLKAKT 945
            VEVLE+GSLQSREHA+  LLT+C+ DR KYREPIL+EGVIPGLLELTVQGTPK Q KA T
Sbjct: 249  VEVLENGSLQSREHAVGALLTLCQSDRFKYREPILREGVIPGLLELTVQGTPKSQSKAHT 308

Query: 946  LLRLLRDSPYPRTDIQAETLENMVCSLISQIDVNEQSGKAKQMLTDMVQVSMEQSLRHLQ 1125
            LL LLRD+PYPR+++Q +TLEN+VC++ISQID +EQSGKAK+ML +MVQVSMEQSL+ LQ
Sbjct: 309  LLCLLRDAPYPRSELQPDTLENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLKQLQ 368

Query: 1126 QRAMVCTP 1149
            QRA+VCTP
Sbjct: 369  QRALVCTP 376


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