BLASTX nr result

ID: Bupleurum21_contig00011518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011518
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876801.1| hypothetical protein ARALYDRAFT_484140 [Arab...   152   2e-35
ref|NP_027420.1| zinc finger CCCH domain-containing protein 17 [...   152   3e-35
gb|AAL24118.1| unknown protein [Arabidopsis thaliana]                 152   3e-35
emb|CBI27485.3| unnamed protein product [Vitis vinifera]              150   8e-35
gb|AAM20729.1| unknown protein [Arabidopsis thaliana]                 150   8e-35

>ref|XP_002876801.1| hypothetical protein ARALYDRAFT_484140 [Arabidopsis lyrata subsp.
           lyrata] gi|297322639|gb|EFH53060.1| hypothetical protein
           ARALYDRAFT_484140 [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score =  152 bits (385), Expect = 2e-35
 Identities = 67/93 (72%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
 Frame = -1

Query: 286 TEPQRQQSEPRNQVPITP-EEEAIKRNTDCVYFLASPLTCKKGIECEYRHSDIARVNPRD 110
           T+PQ+QQ E +    ++  EE+A+K NTDCVYFLASPLTCKKG ECEYRHS+ AR+NPRD
Sbjct: 6   TQPQQQQQEKKQSETVSSAEEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRD 65

Query: 109 CWYWLNGNCLNPKCAFRHPPLDGLLGNQLSAPA 11
           C+YWLNGNC+NPKC FRHPPL+GLLGNQ  APA
Sbjct: 66  CYYWLNGNCMNPKCGFRHPPLEGLLGNQGGAPA 98


>ref|NP_027420.1| zinc finger CCCH domain-containing protein 17 [Arabidopsis
           thaliana] gi|75268039|sp|Q9ZUM0.1|C3H17_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 17;
           Short=AtC3H17 gi|4038036|gb|AAC97218.1| expressed
           protein [Arabidopsis thaliana]
           gi|24030234|gb|AAN41294.1| unknown protein [Arabidopsis
           thaliana] gi|330250460|gb|AEC05554.1| zinc finger CCCH
           domain-containing protein 17 [Arabidopsis thaliana]
          Length = 669

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/95 (70%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
 Frame = -1

Query: 286 TEPQRQQSEPRNQVPITP-EEEAIKRNTDCVYFLASPLTCKKGIECEYRHSDIARVNPRD 110
           T+PQ+Q  + +    ++  EE+A+K NTDCVYFLASPLTCKKG ECEYRHS+ AR+NPRD
Sbjct: 6   TQPQQQHEQKKQSETVSSAEEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRD 65

Query: 109 CWYWLNGNCLNPKCAFRHPPLDGLLGNQLSAPAVN 5
           C+YWLNGNCLNPKC FRHPPL+GLLGNQ  APAV+
Sbjct: 66  CYYWLNGNCLNPKCGFRHPPLEGLLGNQGGAPAVS 100


>gb|AAL24118.1| unknown protein [Arabidopsis thaliana]
          Length = 669

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/95 (70%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
 Frame = -1

Query: 286 TEPQRQQSEPRNQVPITP-EEEAIKRNTDCVYFLASPLTCKKGIECEYRHSDIARVNPRD 110
           T+PQ+Q  + +    ++  EE+A+K NTDCVYFLASPLTCKKG ECEYRHS+ AR+NPRD
Sbjct: 6   TQPQQQHEQKKQSETVSSAEEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRD 65

Query: 109 CWYWLNGNCLNPKCAFRHPPLDGLLGNQLSAPAVN 5
           C+YWLNGNCLNPKC FRHPPL+GLLGNQ  APAV+
Sbjct: 66  CYYWLNGNCLNPKCGFRHPPLEGLLGNQGGAPAVS 100


>emb|CBI27485.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  150 bits (380), Expect = 8e-35
 Identities = 63/88 (71%), Positives = 73/88 (82%)
 Frame = -1

Query: 274 RQQSEPRNQVPITPEEEAIKRNTDCVYFLASPLTCKKGIECEYRHSDIARVNPRDCWYWL 95
           +  + P       PEE+A+KRNTDCVYFLASPLTCKKG ECEYRHS+ AR+NPRDCW+WL
Sbjct: 6   KDSTAPSQPSAAPPEEDALKRNTDCVYFLASPLTCKKGSECEYRHSEHARMNPRDCWFWL 65

Query: 94  NGNCLNPKCAFRHPPLDGLLGNQLSAPA 11
           NGNCLNPKC+FRHPPLDGLLG Q + P+
Sbjct: 66  NGNCLNPKCSFRHPPLDGLLGTQATTPS 93


>gb|AAM20729.1| unknown protein [Arabidopsis thaliana]
          Length = 618

 Score =  150 bits (380), Expect = 8e-35
 Identities = 66/95 (69%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
 Frame = -1

Query: 286 TEPQRQQSEPRNQVPITP-EEEAIKRNTDCVYFLASPLTCKKGIECEYRHSDIARVNPRD 110
           T+PQ+Q  + +    ++  EE+A++ NTDCVYFLASPLTCKKG ECEYRHS+ AR+NPRD
Sbjct: 6   TQPQQQHEQKKQSETVSSAEEDALEWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRD 65

Query: 109 CWYWLNGNCLNPKCAFRHPPLDGLLGNQLSAPAVN 5
           C+YWLNGNCLNPKC FRHPPL+GLLGNQ  APAV+
Sbjct: 66  CYYWLNGNCLNPKCGFRHPPLEGLLGNQGGAPAVS 100


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