BLASTX nr result

ID: Bupleurum21_contig00011488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011488
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchor...   112   3e-23
ref|XP_002305553.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
emb|CAN68930.1| hypothetical protein VITISV_040617 [Vitis vinifera]   110   2e-22
ref|XP_002313676.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchor...   100   1e-19

>ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
           vinifera] gi|297744534|emb|CBI37796.3| unnamed protein
           product [Vitis vinifera]
          Length = 357

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
 Frame = +1

Query: 220 CKSTT--TKCTSLIEYITPNDTTISNITTLFSIPNNLYSLLGANNLPSTTLPSYPIKAKQ 393
           C STT  T C++LI+Y++PN TT+S I TLF +  NL +LLGAN+LP++T P+  + AK 
Sbjct: 28  CNSTTRSTTCSALIDYVSPNTTTLSAIQTLFDV-KNLRTLLGANSLPTSTSPNQSVAAKD 86

Query: 394 SLKIPFPCRCSNGVGTSDGVPVYTVVPNDGLYHIAAE 504
            + IPF CRCSNG G S+  PVYTV  +DGLYHIAAE
Sbjct: 87  KIVIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAAE 123


>ref|XP_002305553.1| predicted protein [Populus trichocarpa] gi|222848517|gb|EEE86064.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/93 (56%), Positives = 70/93 (75%)
 Frame = +1

Query: 226 STTTKCTSLIEYITPNDTTISNITTLFSIPNNLYSLLGANNLPSTTLPSYPIKAKQSLKI 405
           +T T C SLI+YI+PN TT+S+I TLFS+  N++S+L ANNLP +TLP+  I A Q++KI
Sbjct: 21  TTPTTCHSLIDYISPNATTLSHIKTLFSV-KNIHSILAANNLPLSTLPNSTISANQTIKI 79

Query: 406 PFPCRCSNGVGTSDGVPVYTVVPNDGLYHIAAE 504
            FPC C N  G S+  P+YTV  +DGL+HIAAE
Sbjct: 80  SFPCTCINNTGHSNKQPIYTVQKDDGLFHIAAE 112


>emb|CAN68930.1| hypothetical protein VITISV_040617 [Vitis vinifera]
          Length = 414

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
 Frame = +1

Query: 220 CKSTT--TKCTSLIEYITPNDTTISNITTLFSIPNNLYSLLGANNLPSTTLPSYPIKAKQ 393
           C S T  T C++LI+Y++PN TT+S I TLF +  NL +LLGAN+LP++T P+  + AK 
Sbjct: 28  CNSXTRSTTCSALIDYVSPNTTTLSAIQTLFDV-KNLRTLLGANSLPTSTSPNQSVAAKD 86

Query: 394 SLKIPFPCRCSNGVGTSDGVPVYTVVPNDGLYHIAAE 504
            + IPF CRCSNG G S+  PVYTV  +DGLYHIAAE
Sbjct: 87  KIVIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAAE 123


>ref|XP_002313676.1| predicted protein [Populus trichocarpa] gi|222850084|gb|EEE87631.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/93 (55%), Positives = 69/93 (74%)
 Frame = +1

Query: 220 CKSTTTKCTSLIEYITPNDTTISNITTLFSIPNNLYSLLGANNLPSTTLPSYPIKAKQSL 399
           C+  TT C SL+ Y +PN T+IS+I  LF +  NL+SLLGANNL S+T P+Y I+ +Q +
Sbjct: 28  CREGTT-CRSLVGYKSPNTTSISSIQKLFGV-KNLHSLLGANNLRSSTSPNYVIQEQQVI 85

Query: 400 KIPFPCRCSNGVGTSDGVPVYTVVPNDGLYHIA 498
           KIP PC C NG G S+ +P+YTV P+DGLY+IA
Sbjct: 86  KIPIPCICFNGTGASNKMPIYTVQPDDGLYYIA 118


>ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
           vinifera]
          Length = 353

 Score =  100 bits (250), Expect = 1e-19
 Identities = 51/95 (53%), Positives = 66/95 (69%)
 Frame = +1

Query: 220 CKSTTTKCTSLIEYITPNDTTISNITTLFSIPNNLYSLLGANNLPSTTLPSYPIKAKQSL 399
           C S  T C +L+ Y++PN TT+S I TLF +  N  +LLGAN+LP++T  +  + AK  +
Sbjct: 28  CSSGPT-CNALVGYVSPNTTTLSAIQTLFGV-KNFRTLLGANSLPASTPTNQSVAAKDKI 85

Query: 400 KIPFPCRCSNGVGTSDGVPVYTVVPNDGLYHIAAE 504
            IPF CRCSNG G S+  PVYTV  +DGLYHIAAE
Sbjct: 86  VIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAAE 120


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