BLASTX nr result

ID: Bupleurum21_contig00011472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011472
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_12496329.1| conserved domain protein [Streptococcus mitis...    58   1e-06
ref|XP_002147803.1| class III chitinase ChiA1 [Talaromyces marne...    57   2e-06
gb|ELR18268.1| cellulase (glycosyl hydrolase family 5) subfamily...    56   3e-06
ref|XP_003389240.1| PREDICTED: deleted in malignant brain tumors...    56   3e-06

>ref|ZP_12496329.1| conserved domain protein [Streptococcus mitis SK1080]
           gi|339452504|gb|EGP65131.1| conserved domain protein
           [Streptococcus mitis SK1080]
          Length = 1117

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/90 (27%), Positives = 49/90 (54%)
 Frame = +3

Query: 252 ANTMNKKPVLPAAKSSKLLTPKTRRSSKPVLSSTPRSSKVVSASTPKLSKPVSASTPRST 431
           A     +PV P A  +   TP      +P   +TP++ +  + +TPK  +P + +TP++ 
Sbjct: 308 AQPAEDQPVAPGATETP--TPAQPAEDQPAAGTTPKADEPAAGTTPKAEEPAAGTTPKAD 365

Query: 432 KPVSASTPRSSKPESAATPKLSKPVFTSSP 521
           +  + +TP++ +P + ATPK  +P   ++P
Sbjct: 366 ESAAGTTPKAEEPAAGATPKADEPAAGTTP 395



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/96 (30%), Positives = 54/96 (56%)
 Frame = +3

Query: 234 KKEENLANTMNKKPVLPAAKSSKLLTPKTRRSSKPVLSSTPRSSKVVSASTPKLSKPVSA 413
           K EE  A T  K     A +S+   TPK   + +P   +TP++ +  + +TPK  +P + 
Sbjct: 352 KAEEPAAGTTPK-----ADESAAGTTPK---AEEPAAGATPKADEPAAGTTPKAEEPAAG 403

Query: 414 STPRSTKPVSASTPRSSKPESAATPKLSKPVFTSSP 521
           +TP++ +P + +TP++ +P +  TPK  +P   ++P
Sbjct: 404 TTPKAEEPAAGATPKADEPAAGTTPKAEEPAAGTTP 439



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 19/68 (27%), Positives = 43/68 (63%)
 Frame = +3

Query: 318 TRRSSKPVLSSTPRSSKVVSASTPKLSKPVSASTPRSTKPVSASTPRSSKPESAATPKLS 497
           T ++ +P   +TP++ +  + +TPK  +P + +TP++ +P + +TP++ +P +  TPK  
Sbjct: 350 TPKAEEPAAGTTPKADESAAGTTPKAEEPAAGATPKADEPAAGTTPKAEEPAAGTTPKAE 409

Query: 498 KPVFTSSP 521
           +P   ++P
Sbjct: 410 EPAAGATP 417



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = +3

Query: 234 KKEENLANTMNKKPVLPAAKSSKLLTPK---TRRSSKPVLSSTPRSSKVVSASTPKLSKP 404
           K +E+ A T  K     A  + K   P    T ++ +P   +TP++ +  + +TPK  +P
Sbjct: 363 KADESAAGTTPKAEEPAAGATPKADEPAAGTTPKAEEPAAGTTPKAEEPAAGATPKADEP 422

Query: 405 VSASTPRSTKPVSASTPRSSKPESAATPKLSKPVFTSSP 521
            + +TP++ +P + +TP++ +  +  TPK  +P   ++P
Sbjct: 423 AAGTTPKAEEPAAGTTPKADESAAGTTPKAEEPAAGATP 461



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = +3

Query: 234 KKEENLANTMNKKPVLPAAKSSKLLTPK---TRRSSKPVLSSTPRSSKVVSASTPKLSKP 404
           K EE  A    K     A  + K   P    T ++ +P   +TP++ +  + +TPK  +P
Sbjct: 374 KAEEPAAGATPKADEPAAGTTPKAEEPAAGTTPKAEEPAAGATPKADEPAAGTTPKAEEP 433

Query: 405 VSASTPRSTKPVSASTPRSSKPESAATPKLSKPVFTSSP 521
            + +TP++ +  + +TP++ +P + ATPK  +P  TS+P
Sbjct: 434 AAGTTPKADESAAGTTPKAEEPAAGATPKADEPT-TSAP 471


>ref|XP_002147803.1| class III chitinase ChiA1 [Talaromyces marneffei ATCC 18224]
           gi|210070202|gb|EEA24292.1| class III chitinase ChiA1
           [Talaromyces marneffei ATCC 18224]
          Length = 854

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/83 (39%), Positives = 39/83 (46%)
 Frame = +3

Query: 276 VLPAAKSSKLLTPKTRRSSKPVLSSTPRSSKVVSASTPKLSKPVSASTPRSTKPVSASTP 455
           V P  +SS   T KT   S P + STP  S     STP  S P   STP  + P   STP
Sbjct: 464 VRPTTRSS--CTRKTPSPSSPAVISTPSPSSPAVVSTPSPSSPAVVSTPSPSSPAVVSTP 521

Query: 456 RSSKPESAATPKLSKPVFTSSPT 524
             S P   +TP  S P   S+P+
Sbjct: 522 SPSSPAVVSTPSPSSPAVVSTPS 544


>gb|ELR18268.1| cellulase (glycosyl hydrolase family 5) subfamily protein
           [Acanthamoeba castellanii str. Neff]
          Length = 558

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
 Frame = +3

Query: 273 PVLPAAKSSKLLTPKTRRSS-----KPVLSSTPRSSKVVSASTPKLSKPVSASTPRSTKP 437
           P  P+A SS    PK   SS     KP  SS+P + K  ++S+P  +KP ++S+P + K 
Sbjct: 396 PAQPSASSSPA-APKPSASSSPAAPKPSASSSPAAPKPSASSSPAAAKPSASSSPAAPKA 454

Query: 438 VSASTPRSSKPESAATPKLSKPVFTSSP 521
            ++S+P ++KP ++++P   KP  +SSP
Sbjct: 455 SASSSPAAAKPSASSSPAAPKPSASSSP 482


>ref|XP_003389240.1| PREDICTED: deleted in malignant brain tumors 1 protein-like
            [Amphimedon queenslandica]
          Length = 3131

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = +3

Query: 288  AKSSKLLTPKTRR-SSKPVLSSTPRSSKVVSASTPK-LSKPVSASTPRSTKPVSASTPR- 458
            A+SS  L   T++ SS PV SST +SS  V +STP+  S PV +ST +S+ PV +STP+ 
Sbjct: 2688 AQSSTPLQSSTQQPSSTPVQSSTAQSSTPVQSSTPQPSSTPVQSSTAQSSTPVQSSTPQP 2747

Query: 459  SSKPESAATPKLSKPVFTSSP 521
            SS P  ++T + S PV +S+P
Sbjct: 2748 SSTPVQSSTAQSSTPVQSSTP 2768


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