BLASTX nr result

ID: Bupleurum21_contig00011429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011429
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532235.1| Sec-independent protein translocase protein ...   314   8e-84
ref|XP_003536657.1| PREDICTED: sec-independent protein transloca...   310   9e-83
ref|XP_002876731.1| hypothetical protein ARALYDRAFT_484017 [Arab...   308   6e-82
dbj|BAH57012.1| AT2G01110 [Arabidopsis thaliana]                      308   6e-82
ref|NP_565252.1| Sec-independent periplasmic protein translocase...   308   6e-82

>ref|XP_002532235.1| Sec-independent protein translocase protein tatC, putative [Ricinus
           communis] gi|223528092|gb|EEF30166.1| Sec-independent
           protein translocase protein tatC, putative [Ricinus
           communis]
          Length = 340

 Score =  314 bits (804), Expect = 8e-84
 Identities = 160/198 (80%), Positives = 174/198 (87%)
 Frame = +1

Query: 1   FLYPSKELLPEDKEMTIYDHLEELRGRIFVSVLGVGAAILGCFAYSKDLIMILEAPVRTQ 180
           FLYP+KELLP+DKEM+I+DHLEELR RIFVSVL VGAAILGCFA+SK+LIM+LEAPV+ Q
Sbjct: 97  FLYPNKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIMVLEAPVKVQ 156

Query: 181 GVRFLQLAPGEFFFTTXXXXXXXXXXXXXXXXXXXXXKVSGYCGLLIGSPLILYEIIAFV 360
           GVRFLQLAPGEFFFTT                     KVSGYCGLL+GSP+ILYEIIAFV
Sbjct: 157 GVRFLQLAPGEFFFTTL--------------------KVSGYCGLLLGSPIILYEIIAFV 196

Query: 361 LPGLTRSERRFLGPIVIGSSVLFYAGIIFSYLVLTPAALNFFVNYAEGVVESLWSIDQYF 540
           LPGLTR+ERRFLGPIV+GSSVLFYAGIIFSYL+LTPAALNFFV+YAEGVVESLWSIDQYF
Sbjct: 197 LPGLTRAERRFLGPIVLGSSVLFYAGIIFSYLILTPAALNFFVSYAEGVVESLWSIDQYF 256

Query: 541 EFVLVLMFSTGLSFQVPV 594
           EFVLVLMFSTGLSFQVPV
Sbjct: 257 EFVLVLMFSTGLSFQVPV 274


>ref|XP_003536657.1| PREDICTED: sec-independent protein translocase protein TatC-like
           [Glycine max]
          Length = 346

 Score =  310 bits (795), Expect = 9e-83
 Identities = 159/198 (80%), Positives = 171/198 (86%)
 Frame = +1

Query: 1   FLYPSKELLPEDKEMTIYDHLEELRGRIFVSVLGVGAAILGCFAYSKDLIMILEAPVRTQ 180
           FLYP KELLP+DKEM+I+DHLEELR RIFVSVL VGA+ILGCFA+SK+LIMILEAPV+TQ
Sbjct: 103 FLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGASILGCFAFSKELIMILEAPVKTQ 162

Query: 181 GVRFLQLAPGEFFFTTXXXXXXXXXXXXXXXXXXXXXKVSGYCGLLIGSPLILYEIIAFV 360
           GVRFLQLAPGEFFFTT                     KVSGYCGLL+GSP+ILYE+IAFV
Sbjct: 163 GVRFLQLAPGEFFFTTL--------------------KVSGYCGLLLGSPVILYEVIAFV 202

Query: 361 LPGLTRSERRFLGPIVIGSSVLFYAGIIFSYLVLTPAALNFFVNYAEGVVESLWSIDQYF 540
           LPGLT+SERRFLGPIV+GSSVLFYAGI FSYLVLTPAALNFFV YAEG VESLWSIDQYF
Sbjct: 203 LPGLTKSERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGAVESLWSIDQYF 262

Query: 541 EFVLVLMFSTGLSFQVPV 594
           EFVLVLMFSTGLSFQVPV
Sbjct: 263 EFVLVLMFSTGLSFQVPV 280


>ref|XP_002876731.1| hypothetical protein ARALYDRAFT_484017 [Arabidopsis lyrata subsp.
           lyrata] gi|297322569|gb|EFH52990.1| hypothetical protein
           ARALYDRAFT_484017 [Arabidopsis lyrata subsp. lyrata]
          Length = 339

 Score =  308 bits (788), Expect = 6e-82
 Identities = 159/198 (80%), Positives = 169/198 (85%)
 Frame = +1

Query: 1   FLYPSKELLPEDKEMTIYDHLEELRGRIFVSVLGVGAAILGCFAYSKDLIMILEAPVRTQ 180
           FLYP KE LP+DKEMTI+DHLEELR RIFVSVL VGAAILGCFA+SKDLI+ LEAPV+TQ
Sbjct: 96  FLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQ 155

Query: 181 GVRFLQLAPGEFFFTTXXXXXXXXXXXXXXXXXXXXXKVSGYCGLLIGSPLILYEIIAFV 360
           GVRFLQLAPGEFFFTT                     KVSGYCGLL+GSP+ILYEIIAFV
Sbjct: 156 GVRFLQLAPGEFFFTTL--------------------KVSGYCGLLLGSPVILYEIIAFV 195

Query: 361 LPGLTRSERRFLGPIVIGSSVLFYAGIIFSYLVLTPAALNFFVNYAEGVVESLWSIDQYF 540
           LPGLTR+ERRFLGPIV GSS+LFYAG+ FSY VLTPAALNFFVNYAEGVVESLWSIDQYF
Sbjct: 196 LPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYF 255

Query: 541 EFVLVLMFSTGLSFQVPV 594
           EFVLVLMFSTGLSFQVPV
Sbjct: 256 EFVLVLMFSTGLSFQVPV 273


>dbj|BAH57012.1| AT2G01110 [Arabidopsis thaliana]
          Length = 330

 Score =  308 bits (788), Expect = 6e-82
 Identities = 159/198 (80%), Positives = 169/198 (85%)
 Frame = +1

Query: 1   FLYPSKELLPEDKEMTIYDHLEELRGRIFVSVLGVGAAILGCFAYSKDLIMILEAPVRTQ 180
           FLYP KE LP+DKEMTI+DHLEELR RIFVSVL VGAAILGCFA+SKDLI+ LEAPV+TQ
Sbjct: 97  FLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQ 156

Query: 181 GVRFLQLAPGEFFFTTXXXXXXXXXXXXXXXXXXXXXKVSGYCGLLIGSPLILYEIIAFV 360
           GVRFLQLAPGEFFFTT                     KVSGYCGLL+GSP+ILYEIIAFV
Sbjct: 157 GVRFLQLAPGEFFFTTL--------------------KVSGYCGLLLGSPVILYEIIAFV 196

Query: 361 LPGLTRSERRFLGPIVIGSSVLFYAGIIFSYLVLTPAALNFFVNYAEGVVESLWSIDQYF 540
           LPGLTR+ERRFLGPIV GSS+LFYAG+ FSY VLTPAALNFFVNYAEGVVESLWSIDQYF
Sbjct: 197 LPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYF 256

Query: 541 EFVLVLMFSTGLSFQVPV 594
           EFVLVLMFSTGLSFQVPV
Sbjct: 257 EFVLVLMFSTGLSFQVPV 274


>ref|NP_565252.1| Sec-independent periplasmic protein translocase [Arabidopsis
           thaliana] gi|75206327|sp|Q9SJV5.2|TATC_ARATH RecName:
           Full=Sec-independent protein translocase protein TATC,
           chloroplastic; AltName: Full=Protein ALBINO AND PALE
           GREEN 2; AltName: Full=Protein TWIN-ARGININE
           TRANSLOCATION C; AltName: Full=Protein UNFERTILIZED
           EMBRYO SAC 3; Flags: Precursor
           gi|4929312|gb|AAD33946.1|AF145045_1 TATC [Arabidopsis
           thaliana] gi|13430520|gb|AAK25882.1|AF360172_1 putative
           TATC protein [Arabidopsis thaliana]
           gi|15004994|dbj|BAB62074.1| cpTatC [Arabidopsis
           thaliana] gi|15810617|gb|AAL07196.1| putative TATC
           protein [Arabidopsis thaliana]
           gi|20197905|gb|AAF18659.2| TATC-like protein
           [Arabidopsis thaliana] gi|21537010|gb|AAM61351.1|
           TATC-like protein [Arabidopsis thaliana]
           gi|330250308|gb|AEC05402.1| Sec-independent periplasmic
           protein translocase [Arabidopsis thaliana]
          Length = 340

 Score =  308 bits (788), Expect = 6e-82
 Identities = 159/198 (80%), Positives = 169/198 (85%)
 Frame = +1

Query: 1   FLYPSKELLPEDKEMTIYDHLEELRGRIFVSVLGVGAAILGCFAYSKDLIMILEAPVRTQ 180
           FLYP KE LP+DKEMTI+DHLEELR RIFVSVL VGAAILGCFA+SKDLI+ LEAPV+TQ
Sbjct: 97  FLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQ 156

Query: 181 GVRFLQLAPGEFFFTTXXXXXXXXXXXXXXXXXXXXXKVSGYCGLLIGSPLILYEIIAFV 360
           GVRFLQLAPGEFFFTT                     KVSGYCGLL+GSP+ILYEIIAFV
Sbjct: 157 GVRFLQLAPGEFFFTTL--------------------KVSGYCGLLLGSPVILYEIIAFV 196

Query: 361 LPGLTRSERRFLGPIVIGSSVLFYAGIIFSYLVLTPAALNFFVNYAEGVVESLWSIDQYF 540
           LPGLTR+ERRFLGPIV GSS+LFYAG+ FSY VLTPAALNFFVNYAEGVVESLWSIDQYF
Sbjct: 197 LPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYF 256

Query: 541 EFVLVLMFSTGLSFQVPV 594
           EFVLVLMFSTGLSFQVPV
Sbjct: 257 EFVLVLMFSTGLSFQVPV 274


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