BLASTX nr result

ID: Bupleurum21_contig00011427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011427
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516058.1| Pyridoxin biosynthesis protein PDX1, putativ...   400   e-109
ref|XP_002299701.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|NP_188226.1| putative pyridoxal biosynthesis protein PDX1.2 ...   393   e-107
ref|XP_002885122.1| hypothetical protein ARALYDRAFT_479060 [Arab...   391   e-106
ref|XP_002862267.1| hypothetical protein ARALYDRAFT_497537 [Arab...   391   e-106

>ref|XP_002516058.1| Pyridoxin biosynthesis protein PDX1, putative [Ricinus communis]
           gi|223544963|gb|EEF46478.1| Pyridoxin biosynthesis
           protein PDX1, putative [Ricinus communis]
          Length = 305

 Score =  400 bits (1027), Expect = e-109
 Identities = 197/277 (71%), Positives = 236/277 (85%), Gaps = 2/277 (0%)
 Frame = +3

Query: 3   SMKVGLAQMLRGGAIIEVTNSEQAKIAESAGACCIIIIDNSSTGGISRMPDPSLVKEIKR 182
           S+KVGLAQMLRGGAI+EV N +QAK+AE AGAC +++ +     GI RMPDPSL+KEIKR
Sbjct: 24  SIKVGLAQMLRGGAILEVINPQQAKLAEEAGACSVMVTELPIRQGIQRMPDPSLIKEIKR 83

Query: 183 TVSIPVMAKARVGHFVEAQILEAIDTDYIDESEILAVADEDHFINKHNFRVPFVCGCKDL 362
            VSIPV+ +ARVGHFVEAQILEAI+ DYIDESE+LA+ADED+FINKHNFR PF+CGC+DL
Sbjct: 84  AVSIPVITRARVGHFVEAQILEAINVDYIDESELLALADEDNFINKHNFRTPFICGCRDL 143

Query: 363 GEALRRVREGAAMIRTQGD--AYDDIVKTVSNVRRVMGDIRVLSNMDDDEVFAFSKKIGA 536
           GEALRRVREGAAMIRTQG+   Y ++ +TV NVR VM +IR+L+NMD+DE+FAF+KKI A
Sbjct: 144 GEALRRVREGAAMIRTQGELRGYGNVGETVRNVRNVMKEIRILNNMDEDEMFAFAKKINA 203

Query: 537 PYDVVAQTKQMGRLPVVNFAAGGIVTPADAALMMQLGCDGVFVGPEIFYRGDAYKKVRAI 716
           PYD+VAQTKQMGRLPVV FAAGGI TPADAALMMQLGCDG+FVG E+F+  D YK++RAI
Sbjct: 204 PYDLVAQTKQMGRLPVVQFAAGGIATPADAALMMQLGCDGIFVGNEVFHCADPYKRMRAI 263

Query: 717 VQAVRKYSDPCLLAEVSSGFSDAMSRFNLHENSVEQF 827
           VQAVR Y+DP +L E S G  DAM+  NL ++ +EQF
Sbjct: 264 VQAVRHYNDPHVLVESSCGLEDAMADLNLPQDRIEQF 300


>ref|XP_002299701.1| predicted protein [Populus trichocarpa] gi|222846959|gb|EEE84506.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  397 bits (1020), Expect = e-108
 Identities = 197/280 (70%), Positives = 235/280 (83%), Gaps = 2/280 (0%)
 Frame = +3

Query: 3   SMKVGLAQMLRGGAIIEVTNSEQAKIAESAGACCIIIIDNSSTGGISRMPDPSLVKEIKR 182
           S+K GLAQMLRGGAI+EV++ +QAKIAE AGAC I++ +     GI RMPDPSL+KEIKR
Sbjct: 24  SIKAGLAQMLRGGAILEVSSVQQAKIAEEAGACSIMVSEPGLRQGIRRMPDPSLIKEIKR 83

Query: 183 TVSIPVMAKARVGHFVEAQILEAIDTDYIDESEILAVADEDHFINKHNFRVPFVCGCKDL 362
            VSIP++A+ARVGHFVEAQILEAI  DYIDESE+LA+ADED+FINKHNFR PF+CGC++L
Sbjct: 84  AVSIPLIARARVGHFVEAQILEAIGVDYIDESELLALADEDNFINKHNFRCPFICGCRNL 143

Query: 363 GEALRRVREGAAMIRTQGD--AYDDIVKTVSNVRRVMGDIRVLSNMDDDEVFAFSKKIGA 536
           GEALRRVREGAAMIRTQG+     ++ +TV NVR VM ++RVL+NMD+DEVFAF+KKI A
Sbjct: 144 GEALRRVREGAAMIRTQGEILGQGNVAETVKNVRNVMKEVRVLNNMDEDEVFAFAKKIAA 203

Query: 537 PYDVVAQTKQMGRLPVVNFAAGGIVTPADAALMMQLGCDGVFVGPEIFYRGDAYKKVRAI 716
           PYD+VAQ KQMGRLPVV FAAGGIVTPADAALMMQLGCDG+FVG E+F   D YK+VR I
Sbjct: 204 PYDLVAQIKQMGRLPVVQFAAGGIVTPADAALMMQLGCDGIFVGSEVFDSADPYKRVRGI 263

Query: 717 VQAVRKYSDPCLLAEVSSGFSDAMSRFNLHENSVEQFGAG 836
           V+AVR Y+DP +L E S G  D+M+  NL E+ +EQFG G
Sbjct: 264 VEAVRHYNDPHVLVESSCGLEDSMAELNLSEDRIEQFGRG 303


>ref|NP_188226.1| putative pyridoxal biosynthesis protein PDX1.2 [Arabidopsis
           thaliana] gi|45477214|sp|Q9ZNR6.1|PDX12_ARATH RecName:
           Full=Probable pyridoxal biosynthesis protein PDX1.2;
           Short=AtPDX1.2; Short=AtPDX1;3 gi|4103952|gb|AAD01897.1|
           A37 [Arabidopsis thaliana] gi|4103954|gb|AAD01898.1| A37
           [Arabidopsis thaliana] gi|9294451|dbj|BAB02670.1| A37
           protein; ethylene-inducible protein-like [Arabidopsis
           thaliana] gi|27808576|gb|AAO24568.1| At3g16050
           [Arabidopsis thaliana] gi|110736159|dbj|BAF00051.1|
           putative ethylene-inducible protein [Arabidopsis
           thaliana] gi|332642245|gb|AEE75766.1| putative pyridoxal
           biosynthesis protein PDX1.2 [Arabidopsis thaliana]
          Length = 314

 Score =  393 bits (1009), Expect = e-107
 Identities = 193/281 (68%), Positives = 237/281 (84%), Gaps = 3/281 (1%)
 Frame = +3

Query: 3   SMKVGLAQMLRGGAIIEVTNSEQAKIAESAGACCIIIIDN-SSTGGISRMPDPSLVKEIK 179
           S+KVGLAQ+LRGGAI+EV++  QAK+AESAGAC +I+ D   S GG+ RMPDP L+KE+K
Sbjct: 32  SVKVGLAQVLRGGAIVEVSSVNQAKLAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEVK 91

Query: 180 RTVSIPVMAKARVGHFVEAQILEAIDTDYIDESEILAVADEDHFINKHNFRVPFVCGCKD 359
           R VS+PVMA+ARVGHFVEAQILE++  DYIDESEI++VAD+DHFINKHNFR PF+CGC+D
Sbjct: 92  RAVSVPVMARARVGHFVEAQILESLAVDYIDESEIISVADDDHFINKHNFRSPFICGCRD 151

Query: 360 LGEALRRVREGAAMIRTQGD--AYDDIVKTVSNVRRVMGDIRVLSNMDDDEVFAFSKKIG 533
            GEALRR+REGAAMIR QGD  A  +I +TV NVR +MG++RVL+NMDDDEVF F+KKI 
Sbjct: 152 TGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKIS 211

Query: 534 APYDVVAQTKQMGRLPVVNFAAGGIVTPADAALMMQLGCDGVFVGPEIFYRGDAYKKVRA 713
           APYD+VAQTKQMGR+PVV FA+GGI TPADAALMMQLGCDGVFVG E+F   D +KK+R+
Sbjct: 212 APYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVFDGPDPFKKLRS 271

Query: 714 IVQAVRKYSDPCLLAEVSSGFSDAMSRFNLHENSVEQFGAG 836
           IVQAV+ Y+DP +LAE+SSG  +AM   N+  + ++ FG G
Sbjct: 272 IVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDRIQDFGQG 312


>ref|XP_002885122.1| hypothetical protein ARALYDRAFT_479060 [Arabidopsis lyrata subsp.
           lyrata] gi|297330962|gb|EFH61381.1| hypothetical protein
           ARALYDRAFT_479060 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  391 bits (1004), Expect = e-106
 Identities = 193/281 (68%), Positives = 235/281 (83%), Gaps = 3/281 (1%)
 Frame = +3

Query: 3   SMKVGLAQMLRGGAIIEVTNSEQAKIAESAGACCIIIIDN-SSTGGISRMPDPSLVKEIK 179
           S+KVGLAQ+LRGGAI+EV++  QAKIAESAGAC +I+ D   S GG+ RMPDP L+KE+K
Sbjct: 27  SVKVGLAQVLRGGAIVEVSSVNQAKIAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEVK 86

Query: 180 RTVSIPVMAKARVGHFVEAQILEAIDTDYIDESEILAVADEDHFINKHNFRVPFVCGCKD 359
           R VS+PVM +ARVGHFVEAQILE++  DYIDESEI++VADEDHFINKHNFR PF+CGC+D
Sbjct: 87  RAVSVPVMGRARVGHFVEAQILESLAVDYIDESEIISVADEDHFINKHNFRSPFICGCRD 146

Query: 360 LGEALRRVREGAAMIRTQGD--AYDDIVKTVSNVRRVMGDIRVLSNMDDDEVFAFSKKIG 533
            GEALRR+REGAAMIR QGD  A  +I +TV NVR +MG++RVL+NMDDDEVF F+KKI 
Sbjct: 147 TGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKIS 206

Query: 534 APYDVVAQTKQMGRLPVVNFAAGGIVTPADAALMMQLGCDGVFVGPEIFYRGDAYKKVRA 713
           APYD+VAQTKQMGR+PVV FA+GGI TPADAALMMQLGCDGVFVG E+F   D +KK+R+
Sbjct: 207 APYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVFDGPDPFKKLRS 266

Query: 714 IVQAVRKYSDPCLLAEVSSGFSDAMSRFNLHENSVEQFGAG 836
           IVQAV+ Y+DP +LAE+SSG  +AM   N+  + ++ F  G
Sbjct: 267 IVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDRIQDFSQG 307


>ref|XP_002862267.1| hypothetical protein ARALYDRAFT_497537 [Arabidopsis lyrata subsp.
           lyrata] gi|297307590|gb|EFH38525.1| hypothetical protein
           ARALYDRAFT_497537 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  391 bits (1004), Expect = e-106
 Identities = 193/281 (68%), Positives = 235/281 (83%), Gaps = 3/281 (1%)
 Frame = +3

Query: 3   SMKVGLAQMLRGGAIIEVTNSEQAKIAESAGACCIIIIDN-SSTGGISRMPDPSLVKEIK 179
           S+KVGLAQ+LRGGAI+EV++  QAKIAESAGAC +I+ D   S GG+ RMPDP L+KE+K
Sbjct: 32  SVKVGLAQVLRGGAIVEVSSVNQAKIAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEVK 91

Query: 180 RTVSIPVMAKARVGHFVEAQILEAIDTDYIDESEILAVADEDHFINKHNFRVPFVCGCKD 359
           R VS+PVM +ARVGHFVEAQILE++  DYIDESEI++VADEDHFINKHNFR PF+CGC+D
Sbjct: 92  RAVSVPVMGRARVGHFVEAQILESLAVDYIDESEIISVADEDHFINKHNFRSPFICGCRD 151

Query: 360 LGEALRRVREGAAMIRTQGD--AYDDIVKTVSNVRRVMGDIRVLSNMDDDEVFAFSKKIG 533
            GEALRR+REGAAMIR QGD  A  +I +TV NVR +MG++RVL+NMDDDEVF F+KKI 
Sbjct: 152 TGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKIS 211

Query: 534 APYDVVAQTKQMGRLPVVNFAAGGIVTPADAALMMQLGCDGVFVGPEIFYRGDAYKKVRA 713
           APYD+VAQTKQMGR+PVV FA+GGI TPADAALMMQLGCDGVFVG E+F   D +KK+R+
Sbjct: 212 APYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVFDGPDPFKKLRS 271

Query: 714 IVQAVRKYSDPCLLAEVSSGFSDAMSRFNLHENSVEQFGAG 836
           IVQAV+ Y+DP +LAE+SSG  +AM   N+  + ++ F  G
Sbjct: 272 IVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDRIQDFSQG 312


Top