BLASTX nr result

ID: Bupleurum21_contig00011397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011397
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ24533.1| P18 [Solanum chacoense]                                206   2e-51
ref|XP_004147963.1| PREDICTED: histone deacetylase complex subun...   196   2e-48
gb|ACN40741.1| unknown [Picea sitchensis]                             196   2e-48
gb|ABK22701.1| unknown [Picea sitchensis] gi|116791545|gb|ABK260...   196   2e-48
ref|XP_002277566.1| PREDICTED: histone deacetylase complex subun...   196   2e-48

>gb|AAQ24533.1| P18 [Solanum chacoense]
          Length = 156

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/122 (81%), Positives = 107/122 (87%)
 Frame = +2

Query: 176 PIDREKTCPLLLRVFTKVGAHHSDEEFSVRGKEPKDEVQIYTWKDATLRELTDLVKEVAP 355
           P+DREKTCPLLLRVFTKVG HH+  EF+VRGKEPKDEVQIYTW DATLRELTDLVKEVAP
Sbjct: 33  PVDREKTCPLLLRVFTKVGGHHNVNEFAVRGKEPKDEVQIYTWMDATLRELTDLVKEVAP 92

Query: 356 EARRRDATLSFAFVYPSKTGRLIVREVGRTFSVPNPRRPDSGSKALRDFDFEIGDYLDVA 535
           EARRRDA LSFAFVYP K GR +VREVG TFS PN RRPD+GSK L +  F+IGDYLDVA
Sbjct: 93  EARRRDAILSFAFVYPDKRGRFVVREVGTTFSYPNMRRPDNGSKTLSELKFQIGDYLDVA 152

Query: 536 IL 541
           I+
Sbjct: 153 IM 154


>ref|XP_004147963.1| PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis
           sativus] gi|449494271|ref|XP_004159498.1| PREDICTED:
           histone deacetylase complex subunit SAP18-like [Cucumis
           sativus]
          Length = 166

 Score =  196 bits (499), Expect = 2e-48
 Identities = 97/123 (78%), Positives = 108/123 (87%)
 Frame = +2

Query: 173 EPIDREKTCPLLLRVFTKVGAHHSDEEFSVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 352
           EP+DREKTCPLLLRVFTKVG HH+DE+F+VRGKEPKDEVQIYTWKDATLRELTDLVKEVA
Sbjct: 45  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 104

Query: 353 PEARRRDATLSFAFVYPSKTGRLIVREVGRTFSVPNPRRPDSGSKALRDFDFEIGDYLDV 532
           PEARRR+A LSFAFVYP K GR ++++VG T S  N RR D  SKAL + DF+IGDYLDV
Sbjct: 105 PEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDD-SKALGELDFQIGDYLDV 163

Query: 533 AIL 541
           AIL
Sbjct: 164 AIL 166


>gb|ACN40741.1| unknown [Picea sitchensis]
          Length = 150

 Score =  196 bits (499), Expect = 2e-48
 Identities = 92/121 (76%), Positives = 107/121 (88%)
 Frame = +2

Query: 179 IDREKTCPLLLRVFTKVGAHHSDEEFSVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPE 358
           +DREKTCPLLLRVFTK+G+HH+ E+F+VRGKEPKDEVQIYTW+DATLRELTDLVKEVAP 
Sbjct: 29  VDREKTCPLLLRVFTKIGSHHTAEDFAVRGKEPKDEVQIYTWRDATLRELTDLVKEVAPA 88

Query: 359 ARRRDATLSFAFVYPSKTGRLIVREVGRTFSVPNPRRPDSGSKALRDFDFEIGDYLDVAI 538
           ARRRDA LSFAFVYP + GR +VR+VG T++ PN RRPD G+KAL D  F+ GD+LDVAI
Sbjct: 89  ARRRDAKLSFAFVYPDRRGRNVVRQVGVTYAYPNARRPDEGNKALADLSFQTGDFLDVAI 148

Query: 539 L 541
           L
Sbjct: 149 L 149


>gb|ABK22701.1| unknown [Picea sitchensis] gi|116791545|gb|ABK26020.1| unknown
           [Picea sitchensis]
          Length = 150

 Score =  196 bits (499), Expect = 2e-48
 Identities = 92/121 (76%), Positives = 107/121 (88%)
 Frame = +2

Query: 179 IDREKTCPLLLRVFTKVGAHHSDEEFSVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPE 358
           +DREKTCPLLLRVFTK+G+HH+ E+F+VRGKEPKDEVQIYTW+DATLRELTDLVKEVAP 
Sbjct: 29  VDREKTCPLLLRVFTKIGSHHTAEDFAVRGKEPKDEVQIYTWRDATLRELTDLVKEVAPA 88

Query: 359 ARRRDATLSFAFVYPSKTGRLIVREVGRTFSVPNPRRPDSGSKALRDFDFEIGDYLDVAI 538
           ARRRDA LSFAFVYP + GR +VR+VG T++ PN RRPD G+KAL D  F+ GD+LDVAI
Sbjct: 89  ARRRDAKLSFAFVYPDRRGRNVVRQVGVTYAYPNARRPDEGNKALADLSFQTGDFLDVAI 148

Query: 539 L 541
           L
Sbjct: 149 L 149


>ref|XP_002277566.1| PREDICTED: histone deacetylase complex subunit SAP18 [Vitis
           vinifera] gi|296089118|emb|CBI38821.3| unnamed protein
           product [Vitis vinifera]
          Length = 152

 Score =  196 bits (498), Expect = 2e-48
 Identities = 104/155 (67%), Positives = 115/155 (74%), Gaps = 1/155 (0%)
 Frame = +2

Query: 80  EGQRRGGRPYNS-GRVXXXXXXXXXXXKSSNQEPIDREKTCPLLLRVFTKVGAHHSDEEF 256
           EG +R GRP    GR                 EP+DREKTCPLLLRVFTK+G HHS E+F
Sbjct: 6   EGPKRAGRPLPPPGR-------GPPPPPRPRFEPVDREKTCPLLLRVFTKIGCHHSKEDF 58

Query: 257 SVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRDATLSFAFVYPSKTGRLIVREV 436
           +VRGKEPKDEVQIYTWKDATLRELTDLVKEVAP ARRRDA LSFAFVYP   GR ++REV
Sbjct: 59  AVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDAILSFAFVYPDTNGRFVLREV 118

Query: 437 GRTFSVPNPRRPDSGSKALRDFDFEIGDYLDVAIL 541
           G+TFS  N +R D G KAL +  F+IGDYLDVAIL
Sbjct: 119 GKTFSYGNGKRLDDG-KALAELGFQIGDYLDVAIL 152


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