BLASTX nr result

ID: Bupleurum21_contig00011391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011391
         (1605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [...   381   e-126
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-...   366   e-121
emb|CBI25839.3| unnamed protein product [Vitis vinifera]              365   e-121
ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]             318   e-102
ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-...   278   4e-96

>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
            gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
            ESF1, putative [Ricinus communis]
          Length = 722

 Score =  381 bits (979), Expect(2) = e-126
 Identities = 220/430 (51%), Positives = 278/430 (64%), Gaps = 22/430 (5%)
 Frame = -3

Query: 1345 IDIEKLRAYEISRLRYYYAVVECDSIATADYLYKNCDGVEVERSSNRLDLRFIPDSMEFK 1166
            ID EKLRAYE SRLRYYYAVVECDS+ATA++LYK CDGVE ERSSN  DLRF+PDSMEFK
Sbjct: 266  IDEEKLRAYEKSRLRYYYAVVECDSVATAEHLYKACDGVEFERSSNVFDLRFVPDSMEFK 325

Query: 1165 HAPRDVATEAPGSYEGNNFETRALQQTNVRLTWDEDEPKRSKTLKRKYNADQLAELELKE 986
            H PRD+A EAP SYEG +F T+ALQ +N+ ++WDEDEP+R KTLKRK+ ADQLAE+EL+E
Sbjct: 326  HPPRDIAKEAPTSYEGLDFHTKALQHSNIPISWDEDEPQRVKTLKRKFTADQLAEMELQE 385

Query: 985  FLASDESGSDENVVDD----------KKQNMYRALIESGDASDGNEEDVGQEMEVTFNTG 836
            FLASD S SD++  DD          KK++ YRALI+SGD SDG +E+ GQEME+TFNTG
Sbjct: 386  FLASDGSESDDDGNDDNAEGEADRKEKKRDKYRALIQSGDGSDGEDEEEGQEMEITFNTG 445

Query: 835  LEDISKRILEKKDKEAETVWEAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDF 656
            LE +SKRILEK+DK++ETVWEA+L                                  DF
Sbjct: 446  LEGLSKRILEKRDKKSETVWEAHLRKQQEKKKARKKRSKYSSEDESSDADEEMIEEANDF 505

Query: 655  FVEEP-XXXXXXXXXXXXXXKEKQHQETTKQXXXXXXXXXXXXXXENG-DTNXXXXXXXX 482
            FVEEP               +EKQ  +T K+              +N  D          
Sbjct: 506  FVEEPSIKKGKKDAQAKGNKEEKQLLDTDKEAEASKAELELLLADDNEIDNGIKGYNLKR 565

Query: 481  XXXXXXXXKDIPDEDKLPTIDEDDRRRFSTLLNTPLYALDPTDPQFKRSAAFARQVAQKH 302
                    K++PDE+KLPT+D DD  RFS L N+PL+ALDPTDPQFKRSAA+ARQ+AQ+ 
Sbjct: 566  KKAKGKRGKEVPDENKLPTVDYDD-PRFSALFNSPLFALDPTDPQFKRSAAYARQMAQRQ 624

Query: 301  KKGSNMEETAG--REEPAR---LNDDLMTGRDKHAVPD---TRKDKLEISSLVKSIKMKS 146
             KG   E   G  +++PA+   L+D+    +++H   D   ++K+K E+S+LV+SIKMKS
Sbjct: 625  HKGDRQELAEGEHKKQPAKSQLLSDEPDANKNEHLTSDAASSKKEKHELSALVRSIKMKS 684

Query: 145  K--QLPASSK 122
            K  QLP++ K
Sbjct: 685  KQVQLPSNGK 694



 Score = 99.4 bits (246), Expect(2) = e-126
 Identities = 46/60 (76%), Positives = 54/60 (90%)
 Frame = -1

Query: 1605 KAVDLYVLLSSFLPKGGQIISVSVYPSEFGLKRMEEEEVHGPVGLFDDEKEKNASDGEGD 1426
            +AVDLYV+L SFLPKGG I+SV+VYPSEFGL+RMEEEE+HGPVGLFDDEK+KN  D + D
Sbjct: 202  RAVDLYVVLRSFLPKGGDILSVAVYPSEFGLQRMEEEELHGPVGLFDDEKKKNDEDEDED 261


>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
          Length = 726

 Score =  366 bits (940), Expect(2) = e-121
 Identities = 216/431 (50%), Positives = 272/431 (63%), Gaps = 22/431 (5%)
 Frame = -3

Query: 1345 IDIEKLRAYEISRLRYYYAVVECDSIATADYLYKNCDGVEVERSSNRLDLRFIPDSMEFK 1166
            ID EKLRAYE SRL YYYAVV+CDS ATADYLYK CDG+E ERSSN LDLRFIPDSMEFK
Sbjct: 260  IDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSNVLDLRFIPDSMEFK 319

Query: 1165 HAPRDVATEAPGSYEGNNFETRALQQTNVRLTWDEDEPKRSKTLKRKYNADQLAELELKE 986
            H P D+ATEAP  YEG +F TRALQ + + ++WDEDEP+R+KTLKRKYN D++AEL +KE
Sbjct: 320  HPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKRKYNDDEVAELAMKE 379

Query: 985  FLAS--DESGSDENVVDD------KKQNMYRALIESGDASDGNEEDVGQEMEVTFNTGLE 830
            FLAS  DES +D+N  DD      K+QN Y AL+ESGD SD ++E+ GQ+MEVTFNTGLE
Sbjct: 380  FLASDTDESETDDNENDDQSDKEHKRQNKYLALLESGDGSDRDDEEDGQDMEVTFNTGLE 439

Query: 829  DISKRILEKKDKEAETVWEAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFV 650
            DISKRILEK++K++ETVWEAYL                                  DFFV
Sbjct: 440  DISKRILEKREKKSETVWEAYLKKRSEKRKARKNRSKYSSEDESDDTDQELMEQPDDFFV 499

Query: 649  EEPXXXXXXXXXXXXXXKEKQ--HQETTKQXXXXXXXXXXXXXXENG-DTNXXXXXXXXX 479
            EE               K+K+   QET K+              E G DT+         
Sbjct: 500  EEHSAKGTKEVTQGKNDKKKKKLQQETGKEAEVSRAELELLLADEEGADTSVKGYNLKRK 559

Query: 478  XXXXXXXKDIPDEDKLPTIDEDDRRRFSTLLNTPLYALDPTDPQFKRSAAFARQVAQKHK 299
                   ++ PDEDK+P +D DD  RFS+L  +PL+ALDPTDPQFKRSA +ARQ+AQK +
Sbjct: 560  KSKGRKGQEAPDEDKIPAVDYDD-PRFSSLFTSPLFALDPTDPQFKRSATYARQLAQKQQ 618

Query: 298  KGSNMEETAGRE------EPARLNDDLMTGRDKHAVPD---TRKDKLEISSLVKSIKMKS 146
            + S+ +   G+E      +    +D     +D+  + D   ++++K E+SSLV+SIK KS
Sbjct: 619  QKSDGDALRGKEAMKLQKQTRPSSDGPEANKDEPLMSDVLSSKREKHELSSLVRSIKTKS 678

Query: 145  KQ--LPASSKK 119
            KQ  LP++ KK
Sbjct: 679  KQVKLPSNGKK 689



 Score = 97.4 bits (241), Expect(2) = e-121
 Identities = 46/61 (75%), Positives = 55/61 (90%)
 Frame = -1

Query: 1605 KAVDLYVLLSSFLPKGGQIISVSVYPSEFGLKRMEEEEVHGPVGLFDDEKEKNASDGEGD 1426
            KAVDL+++LSSFLPK G I+SV++YPSEFGLKRMEEE VHGP+GLFDDEKE+  SD +GD
Sbjct: 200  KAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLFDDEKEQ--SDDDGD 257

Query: 1425 N 1423
            N
Sbjct: 258  N 258


>emb|CBI25839.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  365 bits (937), Expect(2) = e-121
 Identities = 216/431 (50%), Positives = 271/431 (62%), Gaps = 22/431 (5%)
 Frame = -3

Query: 1345 IDIEKLRAYEISRLRYYYAVVECDSIATADYLYKNCDGVEVERSSNRLDLRFIPDSMEFK 1166
            ID EKLRAYE SRL YYYAVV+CDS ATADYLYK CDG+E ERSSN LDLRFIPDSMEFK
Sbjct: 260  IDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSNVLDLRFIPDSMEFK 319

Query: 1165 HAPRDVATEAPGSYEGNNFETRALQQTNVRLTWDEDEPKRSKTLKRKYNADQLAELELKE 986
            H P D+ATEAP  YEG +F TRALQ + + ++WDEDEP+R+KTLKRKYN D+ AEL +KE
Sbjct: 320  HPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKRKYNDDEQAELAMKE 379

Query: 985  FLAS--DESGSDENVVDD------KKQNMYRALIESGDASDGNEEDVGQEMEVTFNTGLE 830
            FLAS  DES +D+N  DD      K+QN Y AL+ESGD SD ++E+ GQ+MEVTFNTGLE
Sbjct: 380  FLASDTDESETDDNENDDQSDKEHKRQNKYLALLESGDGSDRDDEEDGQDMEVTFNTGLE 439

Query: 829  DISKRILEKKDKEAETVWEAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFV 650
            DISKRILEK++K++ETVWEAYL                                  DFFV
Sbjct: 440  DISKRILEKREKKSETVWEAYLKKRSEKRKARKNRSKYSSEDESDDTDQELMEQPDDFFV 499

Query: 649  EEPXXXXXXXXXXXXXXKEKQ--HQETTKQXXXXXXXXXXXXXXENG-DTNXXXXXXXXX 479
            EE               K+K+   QET K+              E G DT+         
Sbjct: 500  EEHSAKGTKEVTQGKNDKKKKKLQQETGKEAEVSRAELELLLADEEGADTSVKGYNLKRK 559

Query: 478  XXXXXXXKDIPDEDKLPTIDEDDRRRFSTLLNTPLYALDPTDPQFKRSAAFARQVAQKHK 299
                   ++ PDEDK+P +D DD  RFS+L  +PL+ALDPTDPQFKRSA +ARQ+AQK +
Sbjct: 560  KSKGRKGQEAPDEDKIPAVDYDD-PRFSSLFTSPLFALDPTDPQFKRSATYARQLAQKQQ 618

Query: 298  KGSNMEETAGRE------EPARLNDDLMTGRDKHAVPD---TRKDKLEISSLVKSIKMKS 146
            + S+ +   G+E      +    +D     +D+  + D   ++++K E+SSLV+SIK KS
Sbjct: 619  QKSDGDALRGKEAMKLQKQTRPSSDGPEANKDEPLMSDVLSSKREKHELSSLVRSIKTKS 678

Query: 145  KQ--LPASSKK 119
            KQ  LP++ KK
Sbjct: 679  KQVKLPSNGKK 689



 Score = 97.4 bits (241), Expect(2) = e-121
 Identities = 46/61 (75%), Positives = 55/61 (90%)
 Frame = -1

Query: 1605 KAVDLYVLLSSFLPKGGQIISVSVYPSEFGLKRMEEEEVHGPVGLFDDEKEKNASDGEGD 1426
            KAVDL+++LSSFLPK G I+SV++YPSEFGLKRMEEE VHGP+GLFDDEKE+  SD +GD
Sbjct: 200  KAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLFDDEKEQ--SDDDGD 257

Query: 1425 N 1423
            N
Sbjct: 258  N 258


>ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]
          Length = 695

 Score =  318 bits (814), Expect(2) = e-102
 Identities = 202/433 (46%), Positives = 254/433 (58%), Gaps = 25/433 (5%)
 Frame = -3

Query: 1345 IDIEKLRAYEISRLRYYYAVVECDSIATADYLYKNCDGVEVERSSNRLDLRFIPDSMEFK 1166
            +D EKLRAYE SR+RYY+AVVECDS ATA+Y+YK CDG+E+++SSN LDLRFIPD+MEFK
Sbjct: 251  LDNEKLRAYEKSRMRYYFAVVECDSSATANYIYKECDGLELKQSSNALDLRFIPDNMEFK 310

Query: 1165 HAPRDVATEAPGSYEGNNFETRALQQTNVRLTWDEDEPKRSKTLKRKYNADQLAELELKE 986
            H PRDVATE P +YE  +F +RALQ + V LTWD+DEP R+KTL RK   +QLAE E+KE
Sbjct: 311  HPPRDVATEVPANYECKDFYSRALQHSEVNLTWDDDEPLRAKTLNRKLTDEQLAEFEVKE 370

Query: 985  FLASDESGSDE----NVVDD------KKQNMYRALIESGDASD-GNEEDVGQEMEVTFNT 839
            FL SDES SD+    N  DD      KK+  YRAL++SGD SD GNE D  Q MEVTFNT
Sbjct: 371  FLTSDESESDDSKDNNETDDQPDKMAKKRAKYRALLQSGDDSDGGNEHDNAQNMEVTFNT 430

Query: 838  GLEDISKRILEKKDKEAETVWEAYL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 662
            GLED+SK I+EKKDK++ETVW+AYL                                   
Sbjct: 431  GLEDLSKYIMEKKDKKSETVWDAYLSKKSEKKKAGKNKRKYSSDDDDSDDTDQEATEEAD 490

Query: 661  DFFVEEPXXXXXXXXXXXXXXKEKQHQETTKQXXXXXXXXXXXXXXENGDTNXXXXXXXX 482
            DFF+EEP              +E++H+E                  + G           
Sbjct: 491  DFFIEEP-AAKKRKKPQNKEDEEQRHEEIDGLDKASKEELELLLADDKGTDTGVKGYNLK 549

Query: 481  XXXXXXXXKDIPDED--KLPTIDEDDRRRFSTLLNTPLYALDPTDPQFKRSAAFARQVAQ 308
                    +   D D  K+P+   +D  RFS L  +P YA+DPTDPQFKRSA +ARQ+AQ
Sbjct: 550  FKKGKGKKRRENDIDEEKIPSNAYND-PRFSALF-SPNYAIDPTDPQFKRSATYARQLAQ 607

Query: 307  KHKKGSNMEETAGREEPARLNDDLMTGRDKHAVPD---------TRKDKLEISSLVKSIK 155
            K +K  N +    R EP +L    ++  D   + D         ++KDK E+SSLVKSIK
Sbjct: 608  KQQK-DNADPPVER-EPTKLKGTQLSSEDSGRMKDEEEGLDALKSKKDKYELSSLVKSIK 665

Query: 154  MKSK--QLPASSK 122
            MKSK  QLP+ +K
Sbjct: 666  MKSKQVQLPSDNK 678



 Score = 82.8 bits (203), Expect(2) = e-102
 Identities = 40/53 (75%), Positives = 44/53 (83%)
 Frame = -1

Query: 1605 KAVDLYVLLSSFLPKGGQIISVSVYPSEFGLKRMEEEEVHGPVGLFDDEKEKN 1447
            KAVDLYVLLSSF+P  G I SV VYPSEFGL+RM+EEEV GP+GLFDDE   N
Sbjct: 196  KAVDLYVLLSSFVPPNGLIKSVRVYPSEFGLQRMKEEEVRGPIGLFDDEDSSN 248


>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 740

 Score =  278 bits (711), Expect(2) = 4e-96
 Identities = 145/202 (71%), Positives = 166/202 (82%), Gaps = 8/202 (3%)
 Frame = -3

Query: 1345 IDIEKLRAYEISRLRYYYAVVECDSIATADYLYKNCDGVEVERSSNRLDLRFIPDSMEFK 1166
            +D EKLRAYE+SRLRYYYAVVECDSIATADYLYK CDGVE ERSSN LDLRFIPDSM+F+
Sbjct: 290  MDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEFERSSNILDLRFIPDSMKFE 349

Query: 1165 HAPRDVATEAPGSYEGNNFETRALQQTNVRLTWDEDEPKRSKTLKRKYNADQLAELELKE 986
            H PRD ATEAP SYE  NF T ALQ + + L+WDEDEP+R K LKRK+NADQLA+LELKE
Sbjct: 350  HPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRVKALKRKFNADQLADLELKE 409

Query: 985  FLASDESGSDENVVDD--------KKQNMYRALIESGDASDGNEEDVGQEMEVTFNTGLE 830
            FLASDES SD+   D         KK + YRAL++S +  DG E+D GQ+MEVTFNTGLE
Sbjct: 410  FLASDESESDDESDDGEDQVDKKRKKGDKYRALLQSDE--DG-EQDGGQDMEVTFNTGLE 466

Query: 829  DISKRILEKKDKEAETVWEAYL 764
            DISKRILEKKDK++ET+WEA+L
Sbjct: 467  DISKRILEKKDKKSETLWEAHL 488



 Score =  101 bits (252), Expect(2) = 4e-96
 Identities = 47/61 (77%), Positives = 56/61 (91%)
 Frame = -1

Query: 1605 KAVDLYVLLSSFLPKGGQIISVSVYPSEFGLKRMEEEEVHGPVGLFDDEKEKNASDGEGD 1426
            KAVDLYV+LSSFLPKGGQI+SV+VYPSEFGL+RM+EEE+HGPVGLFD E++KN  D + D
Sbjct: 225  KAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLFDGEQKKNDEDDDDD 284

Query: 1425 N 1423
            N
Sbjct: 285  N 285



 Score =  101 bits (252), Expect = 5e-19
 Identities = 60/114 (52%), Positives = 74/114 (64%), Gaps = 8/114 (7%)
 Frame = -3

Query: 442 EDKLPTIDEDDRRRFSTLLNTPLYALDPTDPQFKRSAAFARQVAQKHKKGSNMEETAGR- 266
           EDK+PT+D +D R FS L N+PL+ALDPTDPQFKRSAA+ RQVA K  KG   + T  R 
Sbjct: 592 EDKIPTVDYNDPR-FSALFNSPLFALDPTDPQFKRSAAYVRQVALKQPKGDGYQPTKSRH 650

Query: 265 -----EEPARLNDDLMTG--RDKHAVPDTRKDKLEISSLVKSIKMKSKQLPASS 125
                ++PA   +D   G    K     ++K+K E+SSLVKSIKMKSKQL   S
Sbjct: 651 GKSSTKQPAAPGEDESKGDVSVKTEGDSSKKEKYELSSLVKSIKMKSKQLQLPS 704


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