BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011377
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   252   4e-65
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   252   5e-65
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,...   244   1e-62
ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   239   3e-61

>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  252 bits (644), Expect = 4e-65
 Identities = 124/212 (58%), Positives = 163/212 (76%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +Y+E+G +D A+++FD C+E+NTEVWNTMI GY+QNN P++A++LF +   ESE+     
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVM-ESEQFX--- 319

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
            +DDV+FLSALTA SQLQ L+  + LHAY +K+ + L ++ILNAI+VMYSRC S+ TSFK
Sbjct: 320 -LDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFK 378

Query: 361 IFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXXXX 540
           +FS M  RD V+WNTM+SA VQN LD+EGLMLV EMQKQGF++DSVT+T           
Sbjct: 379 VFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRS 438

Query: 541 XEVGRQTHAYLLRHDIQLEGMESYLIDMYSKS 636
            E+G+Q HAYL+RH IQ EGM+ YLIDMY+KS
Sbjct: 439 QEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKS 470



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +YS  G + ++ KVF   +E++   WNTM+S ++QN L  + L L        E      
Sbjct: 366 MYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLV------FEMQKQGF 419

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
           +VD V+  + L+ AS L+     K  HAY I++      M    ++ MY++   + T+ +
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD-GYLIDMYAKSGLITTAQQ 478

Query: 361 IF--SIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXX 534
           +F  +  ++RD  +WN MI+   QN L EEG  +  +M +Q    ++VT+          
Sbjct: 479 LFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPM 538

Query: 535 XXXEVGRQTHAYLLRHDI-QLEGMESYLIDMYSKS 636
               +G+Q H + +R  + Q   + + L+DMYSKS
Sbjct: 539 GTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKS 573



 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
 Frame = +1

Query: 10  EMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVGLVD 189
           +    D  ++VFD   ++N   WNTMIS Y++    ++A ++F        +        
Sbjct: 164 DFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIR------PT 217

Query: 190 DVSFLSALTAASQLQQLNFAKMLHAYSIKNLSAL--SIMILNAIVVMYSRCNSVDTSFKI 363
            VSF++   A  ++   + A +L+   +K  S       ++++ + MY+    VD + +I
Sbjct: 218 PVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREI 277

Query: 364 FSIMHNRDNVSWNTMISALVQNDLDEEGL-MLVHEMQKQGFVIDSVTVTXXXXXXXXXXX 540
           F     R+   WNTMI   VQN+   E + + V  M+ + F +D VT             
Sbjct: 278 FDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQW 337

Query: 541 XEVGRQTHAYLLRHDIQLE-GMESYLIDMYSK 633
            ++GRQ HAY+L+    L+  + + +I MYS+
Sbjct: 338 LDLGRQLHAYILKSSTILQVVILNAIIVMYSR 369



 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
 Frame = +1

Query: 16  GQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNR-AASESEKHDNVGLVDD 192
           G    A  +FD      T +WNT+I G+I NN+P+ AL  + R  AS S K D+      
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDS------ 104

Query: 193 VSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRC------------ 336
            +F S L A +Q + L   K LH + +++    S ++ N+++ MYS C            
Sbjct: 105 YTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYD 164

Query: 337 -NSVDTSFKIFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQG 480
            N+ D   ++F  M  R+ V+WNTMIS  V+ +   E   +   M + G
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG 213



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 42/169 (24%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQ--CVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDN 174
           +Y++ G + +A+++F++    +++   WN MI+GY QN L  +   +F +   ++ + + 
Sbjct: 466 MYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNA 525

Query: 175 VGLVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTS 354
           V L       S L A + +  +   K +H ++I+     ++ +  A++ MYS+  ++  +
Sbjct: 526 VTLA------SILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYA 579

Query: 355 FKIFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVT 501
             +F+    +++V++ TMI +  Q+ + E  L L H M   G   DSVT
Sbjct: 580 ENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVT 628


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  252 bits (643), Expect = 5e-65
 Identities = 124/212 (58%), Positives = 163/212 (76%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +Y+E+G +D A+++FD C+E+NTEVWNTMI GY+QNN P++A++LF +   ESE+     
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVM-ESEQF---- 318

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
           ++DDV+FLSALTA SQLQ L   + LHAY +K+ + L ++ILNAI+VMYSRC S+ TSFK
Sbjct: 319 VLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFK 378

Query: 361 IFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXXXX 540
           +FS M  RD V+WNTM+SA VQN LD+EGLMLV  MQKQGF++DSVT+T           
Sbjct: 379 VFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRS 438

Query: 541 XEVGRQTHAYLLRHDIQLEGMESYLIDMYSKS 636
            E+G+Q HAYL+RH IQ EGM+SYLIDMY+KS
Sbjct: 439 QEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKS 470



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +YS  G + ++ KVF   +E++   WNTM+S ++QN L  + L L      +        
Sbjct: 366 MYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGF------ 419

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
           +VD V+  + L+ AS L+     K  HAY I++      M  + ++ MY++   + T+ +
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD-SYLIDMYAKSGLITTAQQ 478

Query: 361 IF--SIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXX 534
           +F  +  ++RD  +WN MI+   QN L EEG  +  +M +Q    ++VT+          
Sbjct: 479 LFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPM 538

Query: 535 XXXEVGRQTHAYLLRHDIQLE-GMESYLIDMYSKS 636
               +G+Q H + +R  +     + + L+DMYSKS
Sbjct: 539 GTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKS 573



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
 Frame = +1

Query: 10  EMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVGLVD 189
           +    D  ++VFD   ++N   WNTMIS Y++    ++A ++F        +        
Sbjct: 164 DFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIR------PT 217

Query: 190 DVSFLSALTAASQLQQLNFAKMLHAYSIKNLSAL--SIMILNAIVVMYSRCNSVDTSFKI 363
            VSF++   A  ++   + A +L+   +K  S       ++++ + MY+    VD + +I
Sbjct: 218 PVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREI 277

Query: 364 FSIMHNRDNVSWNTMISALVQNDLDEEGL-MLVHEMQKQGFVIDSVTVTXXXXXXXXXXX 540
           F     R+   WNTMI   VQN+   E + + V  M+ + FV+D VT             
Sbjct: 278 FDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQW 337

Query: 541 XEVGRQTHAYLLRHDIQLE-GMESYLIDMYSK 633
            E+GRQ HAY+L+    L+  + + +I MYS+
Sbjct: 338 LELGRQLHAYILKSSTILQVVILNAIIVMYSR 369



 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
 Frame = +1

Query: 16  GQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNR-AASESEKHDNVGLVDD 192
           G    A  +FD      T +WNT+I G+I NN+P+ AL  + R  AS S K D+      
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDS------ 104

Query: 193 VSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRC------------ 336
            +F S L A +Q + L   K LH + +++    S ++ N+++ MYS C            
Sbjct: 105 YTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYD 164

Query: 337 -NSVDTSFKIFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQG 480
            N+ D   ++F  M  R+ V+WNTMIS  V+ +   E   +   M + G
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG 213



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 43/169 (25%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQC--VEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDN 174
           +Y++ G + +A+++F++    +++   WN MI+GY QN L  +   +F +   ++ + + 
Sbjct: 466 MYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNA 525

Query: 175 VGLVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTS 354
           V L       S L A + +  +   K +H ++I+     ++ +  A++ MYS+  ++  +
Sbjct: 526 VTLA------SILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYA 579

Query: 355 FKIFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVT 501
             +F+    +++V++ TMIS+  Q+ + E  L L H M   G   DSVT
Sbjct: 580 ENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVT 628


>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  244 bits (623), Expect = 1e-62
 Identities = 121/212 (57%), Positives = 157/212 (74%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +Y+E+G LD  +KVFD C+EK+ EVWNTMI G+IQNN  ++ + LF +A           
Sbjct: 146 MYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHT----- 200

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
           ++DDV+FLSALTA SQLQ L   + +HA+++KN + LS+ +LNAI+VMYSRCNSV TSF+
Sbjct: 201 ILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFE 260

Query: 361 IFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXXXX 540
           +F  M  +D VSWNTMIS  +QN LDEEGLMLV+EMQKQGF+ DSVTVT           
Sbjct: 261 VFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRN 320

Query: 541 XEVGRQTHAYLLRHDIQLEGMESYLIDMYSKS 636
            E+G+QTHAYL+RH I+ +GM+SYLIDMY+KS
Sbjct: 321 REIGKQTHAYLIRHGIKFDGMDSYLIDMYAKS 352



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +YS    + ++ +VF++  EK+   WNTMISG+IQN L  + L L      E +K   + 
Sbjct: 248 MYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLML----VYEMQKQGFIA 303

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
             D V+  S L+AAS L+     K  HAY I++      M  + ++ MY++   +  S +
Sbjct: 304 --DSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMD-SYLIDMYAKSGLIRISQR 360

Query: 361 IF--SIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXX 534
           +F  + + NRD  +WN +I+   QN L E+  +    M +Q    ++VT+          
Sbjct: 361 VFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSL 420

Query: 535 XXXEVGRQTHAYLLRHDI-QLEGMESYLIDMYSKS 636
               +G+Q H   +R+ + Q   + + L+DMYSKS
Sbjct: 421 GSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKS 455



 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTE--VWNTMISGYIQNNLPVKALELFNRAASESEKHDN 174
           +Y++ G +  +++VF+    +N +   WN +I+GY QN L  +A   F R   E     N
Sbjct: 348 MYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITF-RLMLEQNLRPN 406

Query: 175 VGLVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTS 354
                 V+  S L A S L  +N  K LH  SI+     +I +  A+V MYS+  +++ +
Sbjct: 407 A-----VTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYA 461

Query: 355 FKIFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVT 501
             +F+    R++V++ TMI    Q+ + E  L L H M+K G   D++T
Sbjct: 462 ESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAIT 510



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
 Frame = +1

Query: 37  KVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVGLVDDVSFLSALT 216
           KVF    +++   WNTM+S Y++    V+A+  F        K         VSF++   
Sbjct: 55  KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPS------PVSFVNVFP 108

Query: 217 AASQLQQLNFAKMLHAYSIK--NLSALSIMILNAIVVMYSRCNSVDTSFKIFSIMHNRDN 390
           A S +     A +L+   +K  N  A  + ++++ + MY+    +D   K+F     +  
Sbjct: 109 AISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSA 168

Query: 391 VSWNTMISALVQNDLDEEGLML-VHEMQKQGFVIDSVTVTXXXXXXXXXXXXEVGRQTHA 567
             WNTMI   +QN+   EG+ L +  M+ +  ++D VT               +G+Q HA
Sbjct: 169 EVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHA 228

Query: 568 YLLR-HDIQLEGMESYLIDMYSK 633
           + ++ H +    + + ++ MYS+
Sbjct: 229 FTMKNHTVLSVTVLNAILVMYSR 251


>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  240 bits (612), Expect = 2e-61
 Identities = 118/202 (58%), Positives = 151/202 (74%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +++E+G +D A+KVFD C+EKNTE+WNTMI GY+QNNL ++ ++LF +A    +      
Sbjct: 269 MFAELGHIDFARKVFDHCLEKNTEIWNTMIGGYVQNNLLIEGIDLFLKAVETEQT----- 323

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
           ++DDV+FLS LTA SQLQ L+ A+  HA+ IKNL+   +MI NAI+VMYSRCNSV TSF+
Sbjct: 324 VLDDVTFLSVLTAVSQLQCLDLAQQQHAFVIKNLAVFPVMITNAIIVMYSRCNSVHTSFE 383

Query: 361 IFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXXXX 540
           +F  M  RD VSWNTMISA VQN +D+EGLMLV+EMQKQGF IDSVTVT           
Sbjct: 384 VFEKMVERDVVSWNTMISAFVQNGMDDEGLMLVYEMQKQGFAIDSVTVTALLSAASNLRS 443

Query: 541 XEVGRQTHAYLLRHDIQLEGME 606
            E+G+QT+AYLLRH IQ EGM+
Sbjct: 444 QEIGKQTYAYLLRHGIQFEGMD 465



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
 Frame = +1

Query: 16  GQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVGL-VDD 192
           GQ   A ++FD      T + NT+I G+I NNLP++A+  +++  S S     +G   D 
Sbjct: 56  GQPHIALQLFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLKSSS-----LGTKFDS 110

Query: 193 VSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNS---------- 342
            ++ S L A ++ + L   + +H + I+ LS  S ++ N+++ MYS C S          
Sbjct: 111 YTYSSTLKACAETRSLKIGRAIHCHLIRCLSNPSRIVYNSLLNMYSSCLSNVGCLSYLDY 170

Query: 343 --VDTSFKIFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQG 480
              D   K+F  M  RD V+WNTM+S  V+ +   E + L   + K G
Sbjct: 171 SKYDLVHKVFDTMRKRDVVAWNTMVSWYVKTERYVEAIRLFRLVMKMG 218



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
 Frame = +1

Query: 4   YSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVGL 183
           Y +  + D   KVFD   +++   WNTM+S Y++    V+A+ LF        K      
Sbjct: 167 YLDYSKYDLVHKVFDTMRKRDVVAWNTMVSWYVKTERYVEAIRLFRLVMKMGIK------ 220

Query: 184 VDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSAL--SIMILNAIVVMYSRCNSVDTSF 357
              VSF++   A S ++    A  L+   +K  S     + ++++ + M++    +D + 
Sbjct: 221 PSPVSFVNVFPAFSSVEDFKNANALYGMLVKMGSEYVNDLFVVSSAIFMFAELGHIDFAR 280

Query: 358 KIFSIMHNRDNVSWNTMISALVQNDLDEEGL-MLVHEMQKQGFVIDSVTVTXXXXXXXXX 534
           K+F     ++   WNTMI   VQN+L  EG+ + +  ++ +  V+D VT           
Sbjct: 281 KVFDHCLEKNTEIWNTMIGGYVQNNLLIEGIDLFLKAVETEQTVLDDVTFLSVLTAVSQL 340

Query: 535 XXXEVGRQTHAYLLRHDIQLEGM-ESYLIDMYSK 633
              ++ +Q HA+++++      M  + +I MYS+
Sbjct: 341 QCLDLAQQQHAFVIKNLAVFPVMITNAIIVMYSR 374


>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  239 bits (610), Expect = 3e-61
 Identities = 122/212 (57%), Positives = 152/212 (71%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           ++S++G +D A+ VFD+C+ KNTE+WNTMI  Y+QNN PV+A+++F +A    E     G
Sbjct: 267 MFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEE-----G 321

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
           + DDV+ LS LTA SQLQQ+  A+  HA+ IK+L    I+ILNA++VMYSRCN VDTS K
Sbjct: 322 VCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLK 381

Query: 361 IFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXXXX 540
           +F  M  RD VSWNT+ISA VQN  DEE LMLV EMQKQ F+IDSVT T           
Sbjct: 382 VFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRN 441

Query: 541 XEVGRQTHAYLLRHDIQLEGMESYLIDMYSKS 636
             VG+QTHAYL+R  IQ EGMESYLIDMY+KS
Sbjct: 442 LYVGKQTHAYLIRRGIQFEGMESYLIDMYAKS 473



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 3/214 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVG 180
           +YS    +D++ KVFD+ +E++   WNT+IS ++QN    +AL L        E      
Sbjct: 369 MYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLV------CEMQKQKF 422

Query: 181 LVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTSFK 360
           L+D V+  + L+AAS L+ L   K  HAY I+       M  + ++ MY++  S+ T+  
Sbjct: 423 LIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGME-SYLIDMYAKSGSIRTAEL 481

Query: 361 IF--SIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVTVTXXXXXXXXX 534
           +F  +   +RD  +WN +I+   QN L+E+ ++L+ +M  Q  + ++VT+          
Sbjct: 482 LFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSM 541

Query: 535 XXXEVGRQTHAYLLRHDIQLE-GMESYLIDMYSK 633
               + RQ H + +R  ++    + + L D YSK
Sbjct: 542 GSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSK 575



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 41/169 (24%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
 Frame = +1

Query: 1   VYSEMGQLDSAKKVFDQ--CVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDN 174
           +Y++ G + +A+ +F+Q    +++   WN +I+GY QN L  KA+ L  +   ++     
Sbjct: 469 MYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNV---- 524

Query: 175 VGLVDDVSFLSALTAASQLQQLNFAKMLHAYSIKNLSALSIMILNAIVVMYSRCNSVDTS 354
             + + V+  S L A S +  +  A+ LH +SI+     ++ +  ++   YS+C ++  +
Sbjct: 525 --IPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYA 582

Query: 355 FKIFSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVT 501
             +F     +++V++ TM+    Q+ + +  L L   M + G   D+VT
Sbjct: 583 ENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVT 631



 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
 Frame = +1

Query: 16  GQLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVGLVDDV 195
           GQ   A  + D     +T VWN++I G+I NNLP +AL L+ +  S S    +    D  
Sbjct: 63  GQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNS----SCSTFDPY 118

Query: 196 SFLSALTAASQLQQLNFAKMLHAYSIKNLS----ALSIMILNAIVVMYSRCNSVDTSFKI 363
           +F S L A +  + +   K +H++ +++ S      S ++ N+++ MY+ C   + +  +
Sbjct: 119 TFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNV 177

Query: 364 FSIMHNRDNVSWNTMISALVQNDLDEEGLMLVHEMQKQGFVIDSVT 501
           F +M  R+ V+WNT+I + V+ +   + +     M  Q  +   VT
Sbjct: 178 FDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVT 223



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 45/190 (23%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
 Frame = +1

Query: 19  QLDSAKKVFDQCVEKNTEVWNTMISGYIQNNLPVKALELFNRAASESEKHDNVGLVDDVS 198
           Q + A  VFD    +N   WNT+I  +++ N   +A+E F    ++S       +   V+
Sbjct: 170 QHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSV------MPSPVT 223

Query: 199 FLSALTAASQLQQLNFAKMLHAYSIK--NLSALSIMILNAIVVMYSRCNSVDTSFKIFSI 372
           F++   A S+L      KM + +  K  +     + ++++ ++M+S    +D +  +F  
Sbjct: 224 FVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDR 283

Query: 373 MHNRDNVSWNTMISALVQNDLDEEGL-MLVHEMQKQGFVIDSVTVTXXXXXXXXXXXXEV 549
             N++   WNTMI A VQN+   E + + +  ++ +  V D VT+             ++
Sbjct: 284 CLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKL 343

Query: 550 GRQTHAYLLR 579
             Q HA++++
Sbjct: 344 AEQFHAFVIK 353