BLASTX nr result
ID: Bupleurum21_contig00011280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00011280
(1513 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28700.3| unnamed protein product [Vitis vinifera] 575 e-161
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera] 559 e-157
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm... 536 e-150
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif... 483 e-134
ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycin... 461 e-127
>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 575 bits (1481), Expect = e-161
Identities = 295/435 (67%), Positives = 344/435 (79%), Gaps = 8/435 (1%)
Frame = -1
Query: 1282 LIDRAIRLGTDLLEAGKRSARNRASTHNSLVWPLPSDLTINVFTMLDTQSVCYAAATCNF 1103
LIDRA+RLG+ LLEAGKRSAR RAS HNSL W LP DLTI VF+MLDTQS+CY AATC+
Sbjct: 78 LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137
Query: 1102 FRKCTSDPMCYASIDLLTVVPKVDNMVVSTMIERAGKALRSIKLGLVPTSIMSHGSSHLL 923
F KC DP+CYA+IDL TVVPKV+N VVSTMI+RAGK L+S++LG+VP +S GSS L
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPL 197
Query: 922 VNGQKYSTDVSGFLWPDKRPRHGKESCILSRSCLNSLTVDSGAPGAMLRRLHLYNIERMD 743
V + S D +GF W DKR R GKES ILSRSCL +L+ DSGA GA+L+RLHLYNIERMD
Sbjct: 198 VYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGDSGAAGALLKRLHLYNIERMD 257
Query: 742 NTALSTALSTCPSLLDLVIVGLRVELRQTLESVSQHCHIIERLYFESSKTGRDDTLKMSP 563
NTAL ALS CPSLLDL IVGL VELRQTL SVS +CH+IERL+FESSKTGRDD+LK SP
Sbjct: 258 NTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLK-SP 316
Query: 562 TCTDLVYNCPHITSLALRGFKLQDCKLLTLVKGFRKLKFIDFSTSYSFTGSFLRKLVGGA 383
TC DLV NCPH+TSLALRGFKL D K+ LVKGF KLK++DFSTSYS TG+FLR L
Sbjct: 317 TCVDLVNNCPHLTSLALRGFKLHDYKVRILVKGFHKLKYVDFSTSYSITGTFLRNLGSST 376
Query: 382 GGNLLEVMILRDCMHLKKGEVTNFLSAVLAGDFKFLRHFDISNREGLASGDDWYSRCYNT 203
GGNLLEV++LRDCMHLK+ EV FLSA++AGDF+ LR DISNREGLAS DWY RCYN+
Sbjct: 377 GGNLLEVLLLRDCMHLKEVEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNS 436
Query: 202 SFIPMNHLYEARPNFCLLAEFPSS---IEVES-----DGDSSLPSQQCSHTSNGSSFIYT 47
S IP+ + E RP+ CLLAEFPS IE+E + D+SL SQ SH+S+ S + +
Sbjct: 437 SMIPIKQVSEERPDICLLAEFPSEGSIIEIEQMIDILNSDASLSSQLSSHSSDSSVSMSS 496
Query: 46 SQSSFNSEHGSVNED 2
S+SS+NS+ GS NED
Sbjct: 497 SESSYNSDQGSGNED 511
>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
Length = 603
Score = 559 bits (1441), Expect = e-157
Identities = 295/464 (63%), Positives = 344/464 (74%), Gaps = 37/464 (7%)
Frame = -1
Query: 1282 LIDRAIRLGTDLLEAGKRSARNRASTHNSLVWPLPSDLTINVFTMLDTQSVCYAAATCNF 1103
LIDRA+RLG+ LLEAGKRSAR RAS HNSL W LP DLTI VF+MLDTQS+CY AATC+
Sbjct: 78 LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137
Query: 1102 FRKCTSDPMCYASIDLLTVVPKVDNMVVSTMIERAGKALRSIKLGLVPTSIMSHGSSHLL 923
F KC DP+CYA+IDL TVVPKV+N VVSTMI+RAGK L+S++LG+VP +S GSS L
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPL 197
Query: 922 VNGQKYSTDVSGFLWPDKRPRHGKESCILSRSCLNSLTVDSGAPGAMLRRLHLYNIERMD 743
V + S D +GF W DKR R GKES ILSRSCL +L+ DSGA GA+L+RLHLYNIERMD
Sbjct: 198 VYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGDSGAAGALLKRLHLYNIERMD 257
Query: 742 NTALSTALSTCPSLLDLVIVGLRVELRQTLESVSQHCHIIERLYFESSKTGRDDTLKMSP 563
NTAL ALS CPSLLDL IVGL VELRQTL SVS +CH+IERL+FESSKTGRDD+LK SP
Sbjct: 258 NTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLK-SP 316
Query: 562 TCTDLVYNCPHITSLALRGFKLQDCKLLTLVK---------------------------- 467
TC DLV NCPH+TSLALRGFKL D K+ LVK
Sbjct: 317 TCVDLVNNCPHLTSLALRGFKLHDYKVRILVKVVVHNFLIGRIVGLRHRGEFLIVSALVC 376
Query: 466 -GFRKLKFIDFSTSYSFTGSFLRKLVGGAGGNLLEVMILRDCMHLKKGEVTNFLSAVLAG 290
GF KLK++DFSTSYS TG+FLR L GGNLLEV++LRDCMHLK+ EV FLSA++AG
Sbjct: 377 MGFHKLKYVDFSTSYSITGTFLRNLGSSTGGNLLEVLLLRDCMHLKEVEVAKFLSAIIAG 436
Query: 289 DFKFLRHFDISNREGLASGDDWYSRCYNTSFIPMNHLYEARPNFCLLAEFPSS---IEVE 119
DF+ LR DISNREGLAS DWY RCYN+S IP+ + E RP+ CLLAEFPS IE+E
Sbjct: 437 DFRLLRLLDISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDICLLAEFPSEGSIIEIE 496
Query: 118 S-----DGDSSLPSQQCSHTSNGSSFIYTSQSSFNSEHGSVNED 2
+ D+SL SQ SH+S+ S + +S+SS+NS+ GS NED
Sbjct: 497 QMIDILNSDASLSSQLSSHSSDSSVSMSSSESSYNSDQGSGNED 540
>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
gi|223540114|gb|EEF41691.1| conserved hypothetical
protein [Ricinus communis]
Length = 515
Score = 536 bits (1382), Expect = e-150
Identities = 284/436 (65%), Positives = 330/436 (75%), Gaps = 9/436 (2%)
Frame = -1
Query: 1282 LIDRAIRLGTDLLEAGKRSARNRASTHNSLVWPLPSDLTINVFTMLDTQSVCYAAATCNF 1103
LIDRA++LG+ LLEAG RS+R R+S HNSL W LP DLTI VF+MLDTQS+CYAAATC+
Sbjct: 72 LIDRALKLGSILLEAGNRSSRKRSSKHNSLTWVLPPDLTIKVFSMLDTQSLCYAAATCSM 131
Query: 1102 FRKCTSDPMCYASIDLLTVVPKVDNMVVSTMIERAGKALRSIKLGLVPTSIMSHGSSHLL 923
F KC DP+CYA+IDL TVVPKV+N VVSTMI+RAGK+L+S+KLG+VP S GS L
Sbjct: 132 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKSLQSLKLGIVPGPTSSPGSCETL 191
Query: 922 VNGQKYSTDVSGFLWPDKRPRHGKESCILSRSCLNSLTVDSGAPGAMLRRLHLYNIERMD 743
V + S DVS W DKR R GKES IL+RSCL SLT DSGA G +L+RLHLYNIERMD
Sbjct: 192 VYSIRNSVDVSNISWNDKRTRQGKESSILTRSCLYSLTGDSGAAGTLLKRLHLYNIERMD 251
Query: 742 NTALSTALSTCPSLLDLVIVGLRVELRQTLESVSQHCHIIERLYFESSKTGRDDTLKMSP 563
NT+L ALS CPSLLDL IVGL VELRQTL SVS +C +IERL+FESSKTGRD++LK SP
Sbjct: 252 NTSLYGALSACPSLLDLEIVGLHVELRQTLVSVSMNCPLIERLFFESSKTGRDESLK-SP 310
Query: 562 TCTDLVYNCPHITSLALRGFKLQDCKLLTLVKGFRKLKFIDFSTSYSFTGSFLRKLVGGA 383
TC DLV NCP++TSLALRGFKL DCK+ LVKGFRKLK++DFSTSYS TG FLR L G +
Sbjct: 311 TCVDLVTNCPNLTSLALRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGHFLRNLGGSS 370
Query: 382 GGNLLEVMILRDCMHLKKGEVTNFLSAVLAGDFKFLRHFDISNREGLASGDDWYSRCYNT 203
GGNLLEV EV L+AVL GDFK LRH D+SNREGLAS DWY RCY+
Sbjct: 371 GGNLLEV------------EVARLLTAVLTGDFKSLRHLDVSNREGLASESDWYHRCYSL 418
Query: 202 SFIPMNHLYEARPNFCLLAEFP---SSIEVESDGDS------SLPSQQCSHTSNGSSFIY 50
IP+ + EARP+ CLLA+FP S I+VE DS SLPSQ SHTS+ S F+
Sbjct: 419 RTIPVKQVLEARPDMCLLADFPPDGSFIDVEQMIDSELNSEVSLPSQLSSHTSDSSLFMS 478
Query: 49 TSQSSFNSEHGSVNED 2
TS+SS+NS+ S NE+
Sbjct: 479 TSESSYNSDQSSGNEE 494
>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
Length = 486
Score = 483 bits (1242), Expect = e-134
Identities = 262/435 (60%), Positives = 305/435 (70%), Gaps = 8/435 (1%)
Frame = -1
Query: 1282 LIDRAIRLGTDLLEAGKRSARNRASTHNSLVWPLPSDLTINVFTMLDTQSVCYAAATCNF 1103
LIDRA+RLG+ LLEAGKRSAR RAS HNSL W LP DLTI VF+MLDTQS+CY AATC+
Sbjct: 78 LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137
Query: 1102 FRKCTSDPMCYASIDLLTVVPKVDNMVVSTMIERAGKALRSIKLGLVPTSIMSHGSSHLL 923
F KC DP+CYA+IDL TVVPKV+N VVSTMI+RAGK L+S++LG+VP +S GSS L
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPL 197
Query: 922 VNGQKYSTDVSGFLWPDKRPRHGKESCILSRSCLNSLTVDSGAPGAMLRRLHLYNIERMD 743
V + S D +GF W DKR R GKES ILSRSCL +L+ DSGA GA+L+RLHLYNIERMD
Sbjct: 198 VYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGDSGAAGALLKRLHLYNIERMD 257
Query: 742 NTALSTALSTCPSLLDLVIVGLRVELRQTLESVSQHCHIIERLYFESSKTGRDDTLKMSP 563
NTAL ALS CPSLLDL IVGL VELRQTL SVS +CH+IERL+FESSKTGRDD+LK SP
Sbjct: 258 NTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLK-SP 316
Query: 562 TCTDLVYNCPHITSLALRGFKLQDCKLLTLVKGFRKLKFIDFSTSYSFTGSFLRKLVGGA 383
TC DLV NCPH+TSLALRGFKL D K+ LV
Sbjct: 317 TCVDLVNNCPHLTSLALRGFKLHDYKVRILV----------------------------- 347
Query: 382 GGNLLEVMILRDCMHLKKGEVTNFLSAVLAGDFKFLRHFDISNREGLASGDDWYSRCYNT 203
K EV FLSA++AGDF+ LR DISNREGLAS DWY RCYN+
Sbjct: 348 -----------------KVEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNS 390
Query: 202 SFIPMNHLYEARPNFCLLAEFPSS---IEVES-----DGDSSLPSQQCSHTSNGSSFIYT 47
S IP+ + E RP+ CLLAEFPS IE+E + D+SL SQ SH+S+ S + +
Sbjct: 391 SMIPIKQVSEERPDICLLAEFPSEGSIIEIEQMIDILNSDASLSSQLSSHSSDSSVSMSS 450
Query: 46 SQSSFNSEHGSVNED 2
S+SS+NS+ GS NED
Sbjct: 451 SESSYNSDQGSGNED 465
>ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycine max]
Length = 480
Score = 461 bits (1185), Expect = e-127
Identities = 243/436 (55%), Positives = 300/436 (68%), Gaps = 8/436 (1%)
Frame = -1
Query: 1285 DLIDRAIRLGTDLLEAGKRSARNRASTHNSLVWPLPSDLTINVFTMLDTQSVCYAAATCN 1106
DLIDRA+++ + LL+A K S+R RAS HNSL WPLP DLTI VF+MLDTQS+CYA+A C+
Sbjct: 71 DLIDRALKMASLLLDAAKHSSRKRASNHNSLSWPLPPDLTIKVFSMLDTQSLCYASAACS 130
Query: 1105 FFRKCTSDPMCYASIDLLTVVPKVDNMVVSTMIERAGKALRSIKLGLVPTSIMSHGS-SH 929
F KC DPMCYA++DL T+VPKV+N VV+TM++RAGKALRS+KLG+VP + S GS
Sbjct: 131 LFSKCAKDPMCYANLDLTTLVPKVNNAVVATMVQRAGKALRSLKLGVVPGATTSLGSCPP 190
Query: 928 LLVNGQKYSTDVSGFLWPDKRPRHGKESCILSRSCLNSLTVDSGAPGAMLRRLHLYNIER 749
+ +VS F W DKR R G+ES IL+R CL+ L+ D GAPGA+LR+LHLYNIER
Sbjct: 191 FACTIRNAIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGAPGALLRKLHLYNIER 250
Query: 748 MDNTALSTALSTCPSLLDLVIVGLRVELRQTLESVSQHCHIIERLYFESSKTGRDDTLKM 569
MDN +L ALS CPSLLDL IVGL VELRQTL SVS +CH+IERL+FESSKTGRDD+LK
Sbjct: 251 MDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLK- 309
Query: 568 SPTCTDLVYNCPHITSLALRGFKLQDCKLLTLVKGFRKLKFIDFSTSYSFTGSFLRKLVG 389
+ TC +LV NCPH+TSL+LRGFKL DCK+ LV
Sbjct: 310 AQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLV--------------------------- 342
Query: 388 GAGGNLLEVMILRDCMHLKKGEVTNFLSAVLAGDFKFLRHFDISNREGLASGDDWYSRCY 209
K EV L+A+LAGDFK L H DISNREGLAS DWY RCY
Sbjct: 343 -------------------KMEVAKLLTAILAGDFKLLVHLDISNREGLASEADWYHRCY 383
Query: 208 NTSFIPMNHLYEARPNFCLLAEFPS-------SIEVESDGDSSLPSQQCSHTSNGSSFIY 50
N+S +P+ + EARP+ CL+AE+PS + + + + + SLPSQ SHTS+GS F+
Sbjct: 384 NSSIMPIKQVLEARPDMCLVAEYPSAEGSYIETFDADMNSEISLPSQLSSHTSDGSIFMS 443
Query: 49 TSQSSFNSEHGSVNED 2
TS+SS+NS+ GS NED
Sbjct: 444 TSESSYNSDQGSGNED 459