BLASTX nr result

ID: Bupleurum21_contig00011273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011273
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285007.1| PREDICTED: putative nuclease HARBI1-like [Vi...   134   1e-29
ref|XP_002330319.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_003608022.1| hypothetical protein MTR_4g086650 [Medicago ...   124   1e-26
ref|XP_004153626.1| PREDICTED: putative nuclease HARBI1-like [Cu...   122   2e-26
ref|XP_002313838.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002285007.1| PREDICTED: putative nuclease HARBI1-like [Vitis vinifera]
          Length = 449

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/143 (51%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
 Frame = +3

Query: 54  MDQSFLMMISNLLHLQNHLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------FFT 212
           MDQSFL+M+SNLLHL NHLD                                     FFT
Sbjct: 1   MDQSFLLMLSNLLHLHNHLDPTTTSLLSDTSTATTTATTSPTSPTSLLSSTSAAPLLFFT 60

Query: 213 IASVLSYLTTTAHQKDTANSSNKTHQNPSPNSPNSDQQFSVSAFRAFSTEHIWAMEAPLR 392
           IASVLSY+ ++     ++ S+      P+P + +S   +SVSAFRA STEHIWAMEAPLR
Sbjct: 61  IASVLSYVASSRPSSSSSTSAAAAAAAPNPATTSSTSDYSVSAFRALSTEHIWAMEAPLR 120

Query: 393 DAQWRSLYGLSYPVFTTVVDKLK 461
           DAQWRSLYGLSYPVFTTVVDKLK
Sbjct: 121 DAQWRSLYGLSYPVFTTVVDKLK 143


>ref|XP_002330319.1| predicted protein [Populus trichocarpa] gi|222871354|gb|EEF08485.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  125 bits (315), Expect = 3e-27
 Identities = 70/136 (51%), Positives = 85/136 (62%)
 Frame = +3

Query: 54  MDQSFLMMISNLLHLQNHLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFTIASVLSY 233
           MD+SF++M+SNLLHL N LD                              FFT+AS+LSY
Sbjct: 1   MDESFMLMLSNLLHLHNALDPSTPLLSSPSSSSASSPSSLLSSSSPTPLLFFTLASLLSY 60

Query: 234 LTTTAHQKDTANSSNKTHQNPSPNSPNSDQQFSVSAFRAFSTEHIWAMEAPLRDAQWRSL 413
           L   A QK  A++   +  + +  +P S   FSVSAFRA STEHIW++EAPLRDAQWR+L
Sbjct: 61  L---ASQKKPASTKPPSSTSTTATNPESSS-FSVSAFRALSTEHIWSLEAPLRDAQWRTL 116

Query: 414 YGLSYPVFTTVVDKLK 461
           YGLSYPVFTTVVDKLK
Sbjct: 117 YGLSYPVFTTVVDKLK 132


>ref|XP_003608022.1| hypothetical protein MTR_4g086650 [Medicago truncatula]
           gi|355509077|gb|AES90219.1| hypothetical protein
           MTR_4g086650 [Medicago truncatula]
          Length = 517

 Score =  124 bits (310), Expect = 1e-26
 Identities = 69/137 (50%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
 Frame = +3

Query: 54  MDQSFLMMISNLLHLQNHLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFTIASVLSY 233
           MDQ FL+M+SNLLHL N LD                               FT+ASVLS+
Sbjct: 1   MDQWFLVMLSNLLHLHNSLDPTTDTLSSTATSSTSSSSSLLQSSSIAPLLLFTMASVLSH 60

Query: 234 LTTTAHQKDTANSSNK-THQNPSPNSPNSDQQFSVSAFRAFSTEHIWAMEAPLRDAQWRS 410
           + +T     ++N  NK   +N +PN+ +    +SV+AFRA STEHIW++EAPLRDAQWRS
Sbjct: 61  VASTRTPSSSSNHRNKHLRRNRNPNASD----YSVAAFRALSTEHIWSLEAPLRDAQWRS 116

Query: 411 LYGLSYPVFTTVVDKLK 461
           LYGLSYPVFTTVVDKLK
Sbjct: 117 LYGLSYPVFTTVVDKLK 133


>ref|XP_004153626.1| PREDICTED: putative nuclease HARBI1-like [Cucumis sativus]
           gi|449522815|ref|XP_004168421.1| PREDICTED: putative
           nuclease HARBI1-like [Cucumis sativus]
          Length = 451

 Score =  122 bits (307), Expect = 2e-26
 Identities = 71/143 (49%), Positives = 87/143 (60%), Gaps = 7/143 (4%)
 Frame = +3

Query: 54  MDQSFLMMISNLLHLQNHLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------FFT 212
           MDQSFL+M+S LLHL N+LD                                     FFT
Sbjct: 1   MDQSFLLMLSTLLHLHNYLDPTISLLPSTPSSASSPSSASLNSPTSLLSSSSAAPLLFFT 60

Query: 213 IASVLSYLTTTAHQKDTANSSNKTHQNPSPNSPNSDQQFSVSAFRAFSTEHIWAMEAPLR 392
           IASVLS++ ++     T+ SS      P+P  P+SD  +SVSAFRAFST+HIW++EAPLR
Sbjct: 61  IASVLSFIASS-RPNPTSPSSPTPTPTPTPPPPSSD--YSVSAFRAFSTDHIWSLEAPLR 117

Query: 393 DAQWRSLYGLSYPVFTTVVDKLK 461
           DAQWRSLYGLS+PVFTT+VDKLK
Sbjct: 118 DAQWRSLYGLSHPVFTTIVDKLK 140


>ref|XP_002313838.1| predicted protein [Populus trichocarpa] gi|222850246|gb|EEE87793.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  119 bits (298), Expect = 3e-25
 Identities = 67/137 (48%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
 Frame = +3

Query: 54  MDQSFLMMISNLLHLQNHLD-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFTIASVLS 230
           MD+SF++M+SNLLHL N LD                               FFT+AS+LS
Sbjct: 1   MDESFMLMLSNLLHLHNSLDSSTSFLPSPSSSSSASSPSSLLSSSPPTPLLFFTLASLLS 60

Query: 231 YLTTTAHQKDTANSSNKTHQNPSPNSPNSDQQFSVSAFRAFSTEHIWAMEAPLRDAQWRS 410
           YL   A QK   ++   +  + +  +  S   FSVSAFRA STEHIW++EAPLRD+QWRS
Sbjct: 61  YL---ASQKKPTSTKPPSSTSITTTNLESSSSFSVSAFRALSTEHIWSLEAPLRDSQWRS 117

Query: 411 LYGLSYPVFTTVVDKLK 461
           +YGLSYPVFTTVVDKLK
Sbjct: 118 MYGLSYPVFTTVVDKLK 134


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