BLASTX nr result
ID: Bupleurum21_contig00011259
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00011259 (351 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 72 6e-11 gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] 65 8e-09 emb|CAN62526.1| hypothetical protein VITISV_002348 [Vitis vinifera] 59 5e-07 ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264... 56 3e-06 >ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis] gi|223530005|gb|EEF31930.1| transcription cofactor, putative [Ricinus communis] Length = 1382 Score = 71.6 bits (174), Expect = 6e-11 Identities = 50/108 (46%), Positives = 58/108 (53%), Gaps = 4/108 (3%) Frame = -3 Query: 313 DPG-SQSMQSQLNSXXXXXXXXXXXXXQSG--QLLQQNI-NNIGSAGMQGXXXXXXXXXX 146 DPG SQSMQ Q+++ QLL QNI NN+ S G+Q Sbjct: 114 DPGASQSMQPQVHNQGQSLPVPLSANQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPP 173 Query: 145 XXXXXXXSIPNVVNQNSNMQNIPNISGVVQNSVGNTIGQSVPSNIFGN 2 SIPNVV QNSNMQNI SGV QNS GN++GQ VPSN+F N Sbjct: 174 VSGLAQTSIPNVVGQNSNMQNI---SGVPQNSAGNSLGQGVPSNMFAN 218 >gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] Length = 1405 Score = 64.7 bits (156), Expect = 8e-09 Identities = 42/105 (40%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Frame = -3 Query: 313 DPGSQSMQSQLNSXXXXXXXXXXXXXQSGQLLQQNI-NNIGSAGMQGXXXXXXXXXXXXX 137 DPGS Q QLL QNI NN+ SAG+QG Sbjct: 129 DPGSMQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSG 188 Query: 136 XXXXSIPNVVNQNSNMQNIPNISGVVQNSVGNTIGQSVPSNIFGN 2 IP+VV Q NMQN+ SG+ QNS GN++GQ VPSN+F N Sbjct: 189 LSQSPIPSVVGQTVNMQNM---SGISQNSGGNSMGQGVPSNLFAN 230 >emb|CAN62526.1| hypothetical protein VITISV_002348 [Vitis vinifera] Length = 592 Score = 58.5 bits (140), Expect = 5e-07 Identities = 34/75 (45%), Positives = 42/75 (56%) Frame = -3 Query: 226 QLLQQNINNIGSAGMQGXXXXXXXXXXXXXXXXXSIPNVVNQNSNMQNIPNISGVVQNSV 47 QLL QNI ++G+ G + NVV QNS MQNI SG+ QNSV Sbjct: 89 QLLAQNIQTNIASGVPGSASLPSTLSSVTSLNQTPMQNVVGQNSGMQNI---SGIPQNSV 145 Query: 46 GNTIGQSVPSNIFGN 2 GN++GQ VPSN+F N Sbjct: 146 GNSMGQGVPSNMFAN 160 >ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera] Length = 1671 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/75 (44%), Positives = 41/75 (54%) Frame = -3 Query: 226 QLLQQNINNIGSAGMQGXXXXXXXXXXXXXXXXXSIPNVVNQNSNMQNIPNISGVVQNSV 47 QLL QNI ++G+ + NVV QNS MQNI SG+ QNSV Sbjct: 463 QLLAQNIQTNIASGVPSSASLPSTLSSVTSLNQTPMQNVVGQNSGMQNI---SGIPQNSV 519 Query: 46 GNTIGQSVPSNIFGN 2 GN++GQ VPSN+F N Sbjct: 520 GNSMGQGVPSNMFAN 534