BLASTX nr result

ID: Bupleurum21_contig00011259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011259
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    72   6e-11
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                   65   8e-09
emb|CAN62526.1| hypothetical protein VITISV_002348 [Vitis vinifera]    59   5e-07
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...    56   3e-06

>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 50/108 (46%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
 Frame = -3

Query: 313 DPG-SQSMQSQLNSXXXXXXXXXXXXXQSG--QLLQQNI-NNIGSAGMQGXXXXXXXXXX 146
           DPG SQSMQ Q+++                  QLL QNI NN+ S G+Q           
Sbjct: 114 DPGASQSMQPQVHNQGQSLPVPLSANQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPP 173

Query: 145 XXXXXXXSIPNVVNQNSNMQNIPNISGVVQNSVGNTIGQSVPSNIFGN 2
                  SIPNVV QNSNMQNI   SGV QNS GN++GQ VPSN+F N
Sbjct: 174 VSGLAQTSIPNVVGQNSNMQNI---SGVPQNSAGNSLGQGVPSNMFAN 218


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/105 (40%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 DPGSQSMQSQLNSXXXXXXXXXXXXXQSGQLLQQNI-NNIGSAGMQGXXXXXXXXXXXXX 137
           DPGS   Q                     QLL QNI NN+ SAG+QG             
Sbjct: 129 DPGSMQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSG 188

Query: 136 XXXXSIPNVVNQNSNMQNIPNISGVVQNSVGNTIGQSVPSNIFGN 2
                IP+VV Q  NMQN+   SG+ QNS GN++GQ VPSN+F N
Sbjct: 189 LSQSPIPSVVGQTVNMQNM---SGISQNSGGNSMGQGVPSNLFAN 230


>emb|CAN62526.1| hypothetical protein VITISV_002348 [Vitis vinifera]
          Length = 592

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/75 (45%), Positives = 42/75 (56%)
 Frame = -3

Query: 226 QLLQQNINNIGSAGMQGXXXXXXXXXXXXXXXXXSIPNVVNQNSNMQNIPNISGVVQNSV 47
           QLL QNI    ++G+ G                  + NVV QNS MQNI   SG+ QNSV
Sbjct: 89  QLLAQNIQTNIASGVPGSASLPSTLSSVTSLNQTPMQNVVGQNSGMQNI---SGIPQNSV 145

Query: 46  GNTIGQSVPSNIFGN 2
           GN++GQ VPSN+F N
Sbjct: 146 GNSMGQGVPSNMFAN 160


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/75 (44%), Positives = 41/75 (54%)
 Frame = -3

Query: 226 QLLQQNINNIGSAGMQGXXXXXXXXXXXXXXXXXSIPNVVNQNSNMQNIPNISGVVQNSV 47
           QLL QNI    ++G+                    + NVV QNS MQNI   SG+ QNSV
Sbjct: 463 QLLAQNIQTNIASGVPSSASLPSTLSSVTSLNQTPMQNVVGQNSGMQNI---SGIPQNSV 519

Query: 46  GNTIGQSVPSNIFGN 2
           GN++GQ VPSN+F N
Sbjct: 520 GNSMGQGVPSNMFAN 534


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