BLASTX nr result

ID: Bupleurum21_contig00011254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011254
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|1...    73   3e-11
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    71   1e-10
tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea m...    70   2e-10
gb|AFW61659.1| hypothetical protein ZEAMMB73_514492 [Zea mays]         70   2e-10

>ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|222845463|gb|EEE83010.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = +3

Query: 114 DWRNNVQPEYRRRIVNKIVDSLKRH-PFYAKMGSQELERIAIEFENKIYAESTSTSDY 284
           DWR  +QP+ R+RIVNKI+++LKRH PF  + G QEL++IA+ FE KIY  +TS SDY
Sbjct: 21  DWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQSDY 78


>ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|118486915|gb|ABK95291.1|
           unknown [Populus trichocarpa]
           gi|222840626|gb|EEE78173.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = +3

Query: 114 DWRNNVQPEYRRRIVNKIVDSLKRH-PFYAKMGSQELERIAIEFENKIYAESTSTSDY 284
           DWR  +QP+ R+RIVNKI+++LKRH PF  + G QEL++IA+ FE KIY  +TS SDY
Sbjct: 5   DWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQSDY 62


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = +3

Query: 114 DWRNNVQPEYRRRIVNKIVDSLKRH-PFYAKMGSQELERIAIEFENKIYAESTSTSDY 284
           DWR  +QP+ R+RIVNKI+++LKRH PF  + G +EL++IA+ FE KIY  +TS SDY
Sbjct: 21  DWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQSDY 78


>tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea mays]
          Length = 540

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +3

Query: 72  LGLMDNNYSRAIDDDWRNNVQPEYRRRIVNKIVDSLKRH-PFYAKMGSQELERIAIEFEN 248
           +G +D N +     DWR  +QPE R+RIVNKI+++LK+H P     G  EL +IA+ FE 
Sbjct: 21  VGGVDPNAAAPTGSDWRTQLQPEARQRIVNKIMETLKKHLPVSVPEGLTELHKIAVRFEE 80

Query: 249 KIYAESTSTSDY 284
           KIY  +TS SDY
Sbjct: 81  KIYTAATSQSDY 92


>gb|AFW61659.1| hypothetical protein ZEAMMB73_514492 [Zea mays]
          Length = 1308

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +3

Query: 51  TSLVDMDLGLMDNNYSRAIDDDWRNNVQPEYRRRIVNKIVDSLKRH-PFYAKMGSQELER 227
           T   D   G +D N +     DWR  +QPE R RIVNKI+++LK+H P     G  EL +
Sbjct: 10  TQGTDPAAGGVDPNAAAPAGSDWRTQLQPEARHRIVNKIMETLKKHLPVSVPEGLTELHK 69

Query: 228 IAIEFENKIYAESTSTSDY 284
           IA+ FE KIY  +TS SDY
Sbjct: 70  IAVRFEEKIYTAATSQSDY 88


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