BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011244
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                        160   1e-37
emb|CBI34639.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   147   9e-34
ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup9...   110   9e-23
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9...   110   9e-23

>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score =  160 bits (404), Expect = 1e-37
 Identities = 91/142 (64%), Positives = 101/142 (71%), Gaps = 6/142 (4%)
 Frame = -1

Query: 409 PFGSTXXXXXXXXXXXXXXXXXAQGTAQT-FNTGLNYGNTQSSPLYQSTTPSLGQSTSAF 233
           PFGS                  AQGT  + FN+GLN+GNTQ SPL+QS TPS+GQS+SAF
Sbjct: 479 PFGSAATTSAFGTSTSIFGSTSAQGTTSSPFNSGLNFGNTQQSPLFQSNTPSIGQSSSAF 538

Query: 232 G---SFGQNASGFAQPNLFSTPST-FGGNMFSNTSSL-TTSSPMGFGQTMPSQSTPFQLA 68
           G   SFGQ   GF Q N+F+TPST FG NMFS T SL TTSS MGFGQTMPSQS+PFQL+
Sbjct: 539 GQTPSFGQTTPGFGQANMFNTPSTGFGANMFSTTPSLLTTSSQMGFGQTMPSQSSPFQLS 598

Query: 67  QPSQTGGAFGMGNFGQTQAAGL 2
           QPSQ  GAF  GNFGQTQAAGL
Sbjct: 599 QPSQNAGAF--GNFGQTQAAGL 618


>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  147 bits (371), Expect = 9e-34
 Identities = 78/119 (65%), Positives = 95/119 (79%), Gaps = 7/119 (5%)
 Frame = -1

Query: 340 QGTAQTFNTGLNYGNTQSSPLYQSTTPSLGQSTSAFG----SFGQNAS-GFAQPNLFSTP 176
           QGTA  F +GLN+GNTQSSPL+QS+TPSLGQ+ SAFG    +FGQ+ +  F Q ++F+TP
Sbjct: 519 QGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSIFNTP 578

Query: 175 ST-FGGNMFSNTSSL-TTSSPMGFGQTMPSQSTPFQLAQPSQTGGAFGMGNFGQTQAAG 5
           ST FGGN+FS+   L +TS+P+GFGQT PS STPFQ AQP+QT GAFG  NFGQTQAAG
Sbjct: 579 STGFGGNLFSSAPPLLSTSNPVGFGQTTPSLSTPFQPAQPAQTIGAFGFSNFGQTQAAG 637


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Vitis vinifera]
          Length = 1013

 Score =  147 bits (371), Expect = 9e-34
 Identities = 78/119 (65%), Positives = 95/119 (79%), Gaps = 7/119 (5%)
 Frame = -1

Query: 340 QGTAQTFNTGLNYGNTQSSPLYQSTTPSLGQSTSAFG----SFGQNAS-GFAQPNLFSTP 176
           QGTA  F +GLN+GNTQSSPL+QS+TPSLGQ+ SAFG    +FGQ+ +  F Q ++F+TP
Sbjct: 502 QGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSIFNTP 561

Query: 175 ST-FGGNMFSNTSSL-TTSSPMGFGQTMPSQSTPFQLAQPSQTGGAFGMGNFGQTQAAG 5
           ST FGGN+FS+   L +TS+P+GFGQT PS STPFQ AQP+QT GAFG  NFGQTQAAG
Sbjct: 562 STGFGGNLFSSAPPLLSTSNPVGFGQTTPSLSTPFQPAQPAQTIGAFGFSNFGQTQAAG 620


>ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 2
           [Glycine max]
          Length = 1010

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/118 (51%), Positives = 82/118 (69%), Gaps = 6/118 (5%)
 Frame = -1

Query: 340 QGTAQTFNTGLNYGNTQSSPLYQSTTPSLGQSTSAFGS----FGQNAS-GFAQPNLFSTP 176
           Q T+  F   + +GNTQSSPL+ S  P+ GQ+ SAFG     FGQ  +  F+Q +LFS+P
Sbjct: 505 QATSSPFGNSI-FGNTQSSPLFSSAAPTGGQTGSAFGQNTSPFGQTTTPSFSQSSLFSSP 563

Query: 175 ST-FGGNMFSNTSSLTTSSPMGFGQTMPSQSTPFQLAQPSQTGGAFGMGNFGQTQAAG 5
           S+   G++FS+++ LT+++  GFGQT PS STPFQ AQP+Q+ GAFG  NFGQTQ  G
Sbjct: 564 SSGLVGSIFSSSAPLTSNNLTGFGQTAPSISTPFQPAQPAQSSGAFGFSNFGQTQPVG 621


>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Glycine max]
          Length = 1038

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/118 (51%), Positives = 82/118 (69%), Gaps = 6/118 (5%)
 Frame = -1

Query: 340 QGTAQTFNTGLNYGNTQSSPLYQSTTPSLGQSTSAFGS----FGQNAS-GFAQPNLFSTP 176
           Q T+  F   + +GNTQSSPL+ S  P+ GQ+ SAFG     FGQ  +  F+Q +LFS+P
Sbjct: 511 QATSSPFGNSI-FGNTQSSPLFSSAAPTGGQTGSAFGQNTSPFGQTTTPSFSQSSLFSSP 569

Query: 175 ST-FGGNMFSNTSSLTTSSPMGFGQTMPSQSTPFQLAQPSQTGGAFGMGNFGQTQAAG 5
           S+   G++FS+++ LT+++  GFGQT PS STPFQ AQP+Q+ GAFG  NFGQTQ  G
Sbjct: 570 SSGLVGSIFSSSAPLTSNNLTGFGQTAPSISTPFQPAQPAQSSGAFGFSNFGQTQPVG 627