BLASTX nr result
ID: Bupleurum21_contig00011231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00011231
(1313 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67948.1| hypothetical protein VITISV_002484 [Vitis vinifera] 90 1e-15
ref|XP_002465565.1| hypothetical protein SORBIDRAFT_01g041205 [S... 88 4e-15
gb|AAK27822.1|AC022457_25 putative gag-pol precursor [Oryza sati... 87 7e-15
gb|AAP54205.2| retrotransposon protein, putative, Ty3-gypsy subc... 87 7e-15
emb|CAN77145.1| hypothetical protein VITISV_038340 [Vitis vinifera] 87 1e-14
>emb|CAN67948.1| hypothetical protein VITISV_002484 [Vitis vinifera]
Length = 484
Score = 89.7 bits (221), Expect = 1e-15
Identities = 44/171 (25%), Positives = 92/171 (53%)
Frame = +1
Query: 91 PKEKAKIPHLRFYNGDRDPADHTQFFDQQMALYDLNDHTMCRLFASTLENHAQKWFSLIP 270
P + +P Y+G DP DH + Q M L ND +C++F ++L+ HA WF +P
Sbjct: 15 PPRRFLVPKFSTYDGFSDPFDHIMHYRQLMTLDIGNDALLCKVFPTSLQGHALSWFHRLP 74
Query: 271 PRTIDSWQEFRVSFLRRFRANKPHDVHTVSLESIIQKRSESLEDYIIRFKEGVNKINSVD 450
P ++D++++ +F+ ++ + H + +L++I + +ESL +++ RF + V ++ +
Sbjct: 75 PNSVDNFRDLSEAFVGQYLCSARHKQNISTLQNIKMQENESLREFVKRFGQAVLQVEAYS 134
Query: 451 EGEAISAFRRGLDSFSHQEYVLELIRKNPRTLSKVYAMASEYITGDNALRA 603
+ F+R + + L +K P T++ ++ AS+Y ++ +RA
Sbjct: 135 MDAVLQIFKRSI--CPGTPFFESLAKKPPTTMNDLFRHASKYSMLEDDVRA 183
Score = 61.2 bits (147), Expect = 6e-07
Identities = 34/96 (35%), Positives = 47/96 (48%)
Frame = +1
Query: 847 LPEWTKFTASMTDLLKFIKTKPFFEKPKPMAGAITNRNQTKFCDYHEDVGHTVDECISLK 1026
LP T + S LL I+ F P P+ + R+ +K C YH++ GHT + C SL
Sbjct: 224 LPPLTPLSISYEKLLPMIQNMFDFRWPGPLRADPSKRDHSKKCAYHKEHGHTTETCKSLH 283
Query: 1027 YFLEKQAKGGHLNQYLPPRQEQAQQNPTRTKHTINT 1134
Y +EK + GHL QYL + A+ T H T
Sbjct: 284 YLVEKLIRAGHLKQYL---RSDARVRDTSRNHNSGT 316
>ref|XP_002465565.1| hypothetical protein SORBIDRAFT_01g041205 [Sorghum bicolor]
gi|241919419|gb|EER92563.1| hypothetical protein
SORBIDRAFT_01g041205 [Sorghum bicolor]
Length = 1072
Score = 88.2 bits (217), Expect = 4e-15
Identities = 51/169 (30%), Positives = 86/169 (50%)
Frame = +1
Query: 106 KIPHLRFYNGDRDPADHTQFFDQQMALYDLNDHTMCRLFASTLENHAQKWFSLIPPRTID 285
K+ L+ Y+G +P + ++ + ++H M F L+ +W +P + D
Sbjct: 491 KLEKLKKYDGKENPENWITLYEIAVRSAAGDEHVMANYFPVVLDQAGHQWLLGLPEDSFD 550
Query: 286 SWQEFRVSFLRRFRANKPHDVHTVSLESIIQKRSESLEDYIIRFKEGVNKINSVDEGEAI 465
SW+E R +F+ F A + LE I +++E L DYI RF + KI + EAI
Sbjct: 551 SWEELRQAFIDNFIATCEQPGNKYDLERIRDRKNEPLRDYIRRFSDMRLKIPKISHDEAI 610
Query: 466 SAFRRGLDSFSHQEYVLELIRKNPRTLSKVYAMASEYITGDNALRAMRE 612
SAF +GL H+ +L+RK P T++++ A A Y D+A + +R+
Sbjct: 611 SAFIKGLR--FHEALRNKLLRKRPTTVAELLATAKNYADADDAEKLIRD 657
>gb|AAK27822.1|AC022457_25 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1720
Score = 87.4 bits (215), Expect = 7e-15
Identities = 50/162 (30%), Positives = 80/162 (49%)
Frame = +1
Query: 127 YNGDRDPADHTQFFDQQMALYDLNDHTMCRLFASTLENHAQKWFSLIPPRTIDSWQEFRV 306
YNG +P + + + M L + A+ W +P RTI SW E R
Sbjct: 322 YNGTTNPESWLTVYGIAIRAAGGDSKAMANYLPVALADSARSWLHGLPRRTIGSWAELRD 381
Query: 307 SFLRRFRANKPHDVHTVSLESIIQKRSESLEDYIIRFKEGVNKINSVDEGEAISAFRRGL 486
F+ F+ L +I+QK ESL DYI RF E NKI+ + + I+AF +G+
Sbjct: 382 HFIANFQGTFERPGTQFDLYNIVQKSGESLRDYIRRFSEQRNKISDITDDVIIAAFTKGI 441
Query: 487 DSFSHQEYVLELIRKNPRTLSKVYAMASEYITGDNALRAMRE 612
H++ V + RK PRT+ +++ A+EY ++A+ A ++
Sbjct: 442 ---RHEDLVGKFGRKPPRTVKQMFEKANEYAKAEDAITASKQ 480
>gb|AAP54205.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1734
Score = 87.4 bits (215), Expect = 7e-15
Identities = 50/162 (30%), Positives = 80/162 (49%)
Frame = +1
Query: 127 YNGDRDPADHTQFFDQQMALYDLNDHTMCRLFASTLENHAQKWFSLIPPRTIDSWQEFRV 306
YNG +P + + + M L + A+ W +P RTI SW E R
Sbjct: 357 YNGTTNPESWLTVYGIAIRAAGGDSKAMANYLPVALADSARSWLHGLPRRTIGSWAELRD 416
Query: 307 SFLRRFRANKPHDVHTVSLESIIQKRSESLEDYIIRFKEGVNKINSVDEGEAISAFRRGL 486
F+ F+ L +I+QK ESL DYI RF E NKI+ + + I+AF +G+
Sbjct: 417 HFIANFQGTFERPGTQFDLYNIVQKSGESLRDYIRRFSEQRNKISDITDDVIIAAFTKGI 476
Query: 487 DSFSHQEYVLELIRKNPRTLSKVYAMASEYITGDNALRAMRE 612
H++ V + RK PRT+ +++ A+EY ++A+ A ++
Sbjct: 477 ---RHEDLVGKFGRKPPRTVKQMFEKANEYAKAEDAITASKQ 515
>emb|CAN77145.1| hypothetical protein VITISV_038340 [Vitis vinifera]
Length = 539
Score = 86.7 bits (213), Expect = 1e-14
Identities = 42/165 (25%), Positives = 89/165 (53%)
Frame = +1
Query: 109 IPHLRFYNGDRDPADHTQFFDQQMALYDLNDHTMCRLFASTLENHAQKWFSLIPPRTIDS 288
+P+ Y+G DP DH + Q M L ND +C++F ++L+ A WF +PP ++D+
Sbjct: 11 VPNFFAYDGSSDPFDHITHYRQLMTLDIGNDALLCKVFPASLQGQALSWFHRLPPNSVDN 70
Query: 289 WQEFRVSFLRRFRANKPHDVHTVSLESIIQKRSESLEDYIIRFKEGVNKINSVDEGEAIS 468
+++ +F+ ++ + H + +L++I + +ESL +++ RF + V ++ + +
Sbjct: 71 FRDLSEAFVGQYLCSAQHKQNISTLQNIKMQENESLREFVKRFDQAVLQVEAYSMDVVLQ 130
Query: 469 AFRRGLDSFSHQEYVLELIRKNPRTLSKVYAMASEYITGDNALRA 603
F+R + + L +K P T+ ++ AS+Y ++ +RA
Sbjct: 131 IFKRSI--CPSTPFFESLAKKPPTTMDDLFRRASKYSMLEDDVRA 173
Score = 60.1 bits (144), Expect = 1e-06
Identities = 39/124 (31%), Positives = 56/124 (45%)
Frame = +1
Query: 847 LPEWTKFTASMTDLLKFIKTKPFFEKPKPMAGAITNRNQTKFCDYHEDVGHTVDECISLK 1026
LP +T + S + I+ F P P+ R+ +K C YH++ GHT + C SL
Sbjct: 214 LPPFTPLSVSYEKFIPMIQDLSDFRWPGPIRTDPAKRDHSKKCAYHKEHGHTTERCRSLH 273
Query: 1027 YFLEKQAKGGHLNQYLPPRQEQAQQNPTRTKHTINTIVGGNNSPITDVQEIYMISTNKPP 1206
Y +E+ K GHL QYL + +A+ T H T + +PI I I
Sbjct: 274 YLVERVIKVGHLKQYL---RSKARVRDTPRNHNSGT----SKTPIVPKAVINYIHRGPLD 326
Query: 1207 EECN 1218
EE N
Sbjct: 327 EEYN 330