BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011225
         (1589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   712   0.0  
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   712   0.0  
ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni...   681   0.0  
ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subuni...   674   0.0  
ref|XP_002309305.1| predicted protein [Populus trichocarpa] gi|2...   668   0.0  

>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
            gi|297739835|emb|CBI30017.3| unnamed protein product
            [Vitis vinifera]
          Length = 439

 Score =  712 bits (1838), Expect = 0.0
 Identities = 341/437 (78%), Positives = 382/437 (87%)
 Frame = -2

Query: 1522 MEVEEDIQRKQSLYVSKDEDFKIQKEMYRGQQYSQIYFARLHLMRTLMYSLIPNWKPHLP 1343
            ++ E+ +QRKQSLY S DE F+I+KE YRGQQYSQIYFARLH+MRTL+YSLIPNWKPHLP
Sbjct: 3    IDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLP 62

Query: 1342 VCTVLGLEEGKECVIVGTLYKHMKLKPCVLDEYSKERSVTPLVQPHNFVHSDDYLILEDE 1163
            VCTVLGLEEGKEC+IVGTLYKHMKLKPC+LDEYSKERSV PLV+PHNF+HSDD L+LEDE
Sbjct: 63   VCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDE 122

Query: 1162 SGRVNLSGTRLLPSVYVTGIVVALHGKETGAGDFQVEDILEAGLPPQLEPPYKLGEDKCV 983
            SGRV L GT LLPSVYVTG VV LHGKET AG+F V+DIL+A LPPQ+E P K  EDK V
Sbjct: 123  SGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYV 182

Query: 982  XXXXXXXXXXXXXNPLQVQLLVDHITGHLGDEKEQNSAAQIVQVVIAGDSVEVPRELLNG 803
                         NPLQ QLLVDHITGHLGDEKEQ  AAQIV VVIAG+SV VPR LLNG
Sbjct: 183  VFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLLNG 242

Query: 802  QNLAPKDQSRLSEPIKEADILLTQIAASIPLDIMPGPNDPANFALPQQPLHRCLFPSSAS 623
            QNLA KDQSRLSEPIKE DILLTQIAA +PLDIMPGP+DPANF+LPQQPLHRCLFP S++
Sbjct: 243  QNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGSSA 302

Query: 622  YNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKYSEGRDKVEFLERTMKWRHIAPTAPNT 443
            YN+F+SCTNPHSFEL+ +RFLGTSGQN+ D EKYSE +DK+EF+ERT++WRH+APTAPNT
Sbjct: 303  YNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNT 362

Query: 442  LGCYPFTDRDPFFMESCPHVYFAGNQESFATRLITGSEGQVVRLVTIPRFSETGVAVLLN 263
            LGCYPFTDRDPF +ESCPHVYF GNQ+ + TRLI GSEGQVVRL+ IP+F ETGVAV+LN
Sbjct: 363  LGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAVVLN 422

Query: 262  MRNLECHALSFGTQFSS 212
            MRNLECHALSFGT+FSS
Sbjct: 423  MRNLECHALSFGTEFSS 439


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  712 bits (1838), Expect = 0.0
 Identities = 342/437 (78%), Positives = 383/437 (87%)
 Frame = -2

Query: 1522 MEVEEDIQRKQSLYVSKDEDFKIQKEMYRGQQYSQIYFARLHLMRTLMYSLIPNWKPHLP 1343
            ++ E+ +QRKQSLY S DE F+I+KE YRGQQYSQIYFARLH+MRTL+YSLIPNWKPHLP
Sbjct: 3    IDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLP 62

Query: 1342 VCTVLGLEEGKECVIVGTLYKHMKLKPCVLDEYSKERSVTPLVQPHNFVHSDDYLILEDE 1163
            VCTVLGLEEGKEC+IVGTLYKHMKLKPC+LDEYSKERSV PLV+PHNF+HSDD L+LEDE
Sbjct: 63   VCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDE 122

Query: 1162 SGRVNLSGTRLLPSVYVTGIVVALHGKETGAGDFQVEDILEAGLPPQLEPPYKLGEDKCV 983
            SGRV L GT LLPSVYVTG VV LHGKET AG+F V+DIL+A LPPQ+E P K  EDK V
Sbjct: 123  SGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYV 182

Query: 982  XXXXXXXXXXXXXNPLQVQLLVDHITGHLGDEKEQNSAAQIVQVVIAGDSVEVPRELLNG 803
                         NPLQ QLLVDHITGHLGDEKEQ  AAQIV VVIAG+SV VPR LLNG
Sbjct: 183  VFVSGLSVGSSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLLNG 242

Query: 802  QNLAPKDQSRLSEPIKEADILLTQIAASIPLDIMPGPNDPANFALPQQPLHRCLFPSSAS 623
            QNLA KDQSRLSEPIKE DILLTQIAA +PLDIMPGP+DPANF+LPQQPLHRCLFP S++
Sbjct: 243  QNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGSSA 302

Query: 622  YNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKYSEGRDKVEFLERTMKWRHIAPTAPNT 443
            YN+F+SCTNPHSFEL+ +RFLGTSGQN+ D EKYSE +DK+EF+ERT++WRH+APTAPNT
Sbjct: 303  YNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNT 362

Query: 442  LGCYPFTDRDPFFMESCPHVYFAGNQESFATRLITGSEGQVVRLVTIPRFSETGVAVLLN 263
            LGCYPFTDRDPF +ESCPHVYF GNQ+ + TRLI GSEGQVVRL+ IP+F ETGVAV+LN
Sbjct: 363  LGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAVVLN 422

Query: 262  MRNLECHALSFGTQFSS 212
            MRNLECHALSFGT+FSS
Sbjct: 423  MRNLECHALSFGTEFSS 439


>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  681 bits (1757), Expect = 0.0
 Identities = 321/431 (74%), Positives = 376/431 (87%)
 Frame = -2

Query: 1504 IQRKQSLYVSKDEDFKIQKEMYRGQQYSQIYFARLHLMRTLMYSLIPNWKPHLPVCTVLG 1325
            ++R Q  Y S DE F+I KE Y+GQQYSQIYFARLHLMRTL+YSL+P+WKP+ PVCTVLG
Sbjct: 3    MERVQCAYASLDEAFEIGKEAYQGQQYSQIYFARLHLMRTLLYSLVPHWKPNFPVCTVLG 62

Query: 1324 LEEGKECVIVGTLYKHMKLKPCVLDEYSKERSVTPLVQPHNFVHSDDYLILEDESGRVNL 1145
            LEEGKECVIVGTLYKHMKLKPC+LDEYSKERSV PLV+PHNF+H DD+L+LEDESGRV L
Sbjct: 63   LEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRVKL 122

Query: 1144 SGTRLLPSVYVTGIVVALHGKETGAGDFQVEDILEAGLPPQLEPPYKLGEDKCVXXXXXX 965
            SG+ +LPS YVTGIVVAL GKETGAGDF V+D+L+AGLPPQ+E P K  EDK V      
Sbjct: 123  SGSIILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPPQIEFPLKPREDKYVVLVSGL 182

Query: 964  XXXXXXXNPLQVQLLVDHITGHLGDEKEQNSAAQIVQVVIAGDSVEVPRELLNGQNLAPK 785
                   NPLQ QLL+DHITGHLGDEKEQ+ A+QIV+VV AG+ VE+PR LLNGQNLA K
Sbjct: 183  SVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIVRVVFAGNLVEIPRRLLNGQNLASK 242

Query: 784  DQSRLSEPIKEADILLTQIAASIPLDIMPGPNDPANFALPQQPLHRCLFPSSASYNTFKS 605
            D SR++EPIKE DILL+QIAA +PLDIMPGP+DPANF+LPQQ LHRCLFP S++YNTF+S
Sbjct: 243  DLSRMAEPIKELDILLSQIAAGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSAYNTFRS 302

Query: 604  CTNPHSFELDGVRFLGTSGQNIHDFEKYSEGRDKVEFLERTMKWRHIAPTAPNTLGCYPF 425
            CTNPH FE+D VRFLGTSGQN+ D EKYSE +DK+EF+ERT++WRH+APTAPNTLGCYP+
Sbjct: 303  CTNPHCFEVDNVRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPY 362

Query: 424  TDRDPFFMESCPHVYFAGNQESFATRLITGSEGQVVRLVTIPRFSETGVAVLLNMRNLEC 245
            TD+DPFF+ESCPHVYF GNQ+ F TR+I GSEGQ+VRL+ +P+FSETGVAV+LN+R+L+C
Sbjct: 363  TDKDPFFIESCPHVYFVGNQDKFETRVIKGSEGQLVRLICVPKFSETGVAVMLNLRDLDC 422

Query: 244  HALSFGTQFSS 212
            HALSFGTQFSS
Sbjct: 423  HALSFGTQFSS 433


>ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  674 bits (1739), Expect = 0.0
 Identities = 320/431 (74%), Positives = 372/431 (86%)
 Frame = -2

Query: 1504 IQRKQSLYVSKDEDFKIQKEMYRGQQYSQIYFARLHLMRTLMYSLIPNWKPHLPVCTVLG 1325
            ++R Q  Y S DE F+I KE Y+GQQYSQIYFARLHLMRTL+YSLIP+WKP+ PVCTVLG
Sbjct: 3    MERVQCAYASLDEAFEIGKETYQGQQYSQIYFARLHLMRTLLYSLIPHWKPNSPVCTVLG 62

Query: 1324 LEEGKECVIVGTLYKHMKLKPCVLDEYSKERSVTPLVQPHNFVHSDDYLILEDESGRVNL 1145
            LEEGKECVIVGTLYKHMKLKPC+LDEYSKERSV PLV+PHNF+H DD+L+LEDESGRV L
Sbjct: 63   LEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRVKL 122

Query: 1144 SGTRLLPSVYVTGIVVALHGKETGAGDFQVEDILEAGLPPQLEPPYKLGEDKCVXXXXXX 965
            SG  + PS YVTGIVVAL GKETGAGDF V+D+L+AGLPPQ+E P K  EDK V      
Sbjct: 123  SGYIISPSEYVTGIVVALLGKETGAGDFLVQDVLQAGLPPQIEFPLKSREDKYVVLVSGL 182

Query: 964  XXXXXXXNPLQVQLLVDHITGHLGDEKEQNSAAQIVQVVIAGDSVEVPRELLNGQNLAPK 785
                   NPLQ QLL+DHITGHLGDEKEQ+ A+QI QVV AG+ +E+P  LLNGQNLA K
Sbjct: 183  SVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIAQVVFAGNLIEIPHRLLNGQNLASK 242

Query: 784  DQSRLSEPIKEADILLTQIAASIPLDIMPGPNDPANFALPQQPLHRCLFPSSASYNTFKS 605
            D SR++EPIKE DILL+QIAA +PLDIMPGP+DPANF+LPQQ LHRCLFP S++YNTF+S
Sbjct: 243  DLSRMAEPIKELDILLSQIAAGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSTYNTFRS 302

Query: 604  CTNPHSFELDGVRFLGTSGQNIHDFEKYSEGRDKVEFLERTMKWRHIAPTAPNTLGCYPF 425
            CTNPH FELD VRFLGTSGQN+ D EKYSE +DK+EF+ERT++WRH+APTAPNTLGCYP+
Sbjct: 303  CTNPHCFELDNVRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPY 362

Query: 424  TDRDPFFMESCPHVYFAGNQESFATRLITGSEGQVVRLVTIPRFSETGVAVLLNMRNLEC 245
            TD+DPFF+ESCPHVYF GNQ+ F TR+I GSEGQ+VRLV +P+FSETGVAV+LN+R+L+C
Sbjct: 363  TDKDPFFIESCPHVYFIGNQDKFETRVIKGSEGQLVRLVCVPKFSETGVAVMLNLRDLDC 422

Query: 244  HALSFGTQFSS 212
            +ALSFGTQFSS
Sbjct: 423  YALSFGTQFSS 433


>ref|XP_002309305.1| predicted protein [Populus trichocarpa] gi|222855281|gb|EEE92828.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  668 bits (1723), Expect = 0.0
 Identities = 317/436 (72%), Positives = 366/436 (83%)
 Frame = -2

Query: 1522 MEVEEDIQRKQSLYVSKDEDFKIQKEMYRGQQYSQIYFARLHLMRTLMYSLIPNWKPHLP 1343
            +++E++IQRK+S Y S DE F IQ E YRGQQYSQIYFARLHLMRTL+YSL+ +WKPH+P
Sbjct: 6    IDIEKNIQRKRSTYQSLDETFDIQNETYRGQQYSQIYFARLHLMRTLLYSLVTHWKPHVP 65

Query: 1342 VCTVLGLEEGKECVIVGTLYKHMKLKPCVLDEYSKERSVTPLVQPHNFVHSDDYLILEDE 1163
            VCTVLGLEEGKEC+IVGTLYKHMKLKPCVLDEYSKERS  PLV+PHNF+H DD+L+LEDE
Sbjct: 66   VCTVLGLEEGKECIIVGTLYKHMKLKPCVLDEYSKERSAVPLVKPHNFMHPDDHLVLEDE 125

Query: 1162 SGRVNLSGTRLLPSVYVTGIVVALHGKETGAGDFQVEDILEAGLPPQLEPPYKLGEDKCV 983
            SGRV L GT L PS YVTG VVALHGKET AGDF V D+ EAGL PQ+EP  K  EDK V
Sbjct: 126  SGRVKLGGTVLSPSKYVTGGVVALHGKETTAGDFLVLDVFEAGLAPQIEPQLKSREDKYV 185

Query: 982  XXXXXXXXXXXXXNPLQVQLLVDHITGHLGDEKEQNSAAQIVQVVIAGDSVEVPRELLNG 803
                         NPLQ QLLVDHITGHLGD++EQ  AA+IV VV AG+SVE+P  LLNG
Sbjct: 186  VFVSGVSVGSSTSNPLQFQLLVDHITGHLGDDQEQGIAAEIVHVVFAGNSVEIPSGLLNG 245

Query: 802  QNLAPKDQSRLSEPIKEADILLTQIAASIPLDIMPGPNDPANFALPQQPLHRCLFPSSAS 623
            QNLA KDQSRLSEP++E DI LTQIAA + +DIMPG NDPANFALPQQPL+RCLFP S +
Sbjct: 246  QNLASKDQSRLSEPVQELDIWLTQIAAGVSVDIMPGSNDPANFALPQQPLNRCLFPGSRA 305

Query: 622  YNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKYSEGRDKVEFLERTMKWRHIAPTAPNT 443
            YNTF  CTNPH FELDGVRFLGTSGQNI D +KYSE RD++EF+ERT+KWRH+APTAPNT
Sbjct: 306  YNTFNLCTNPHCFELDGVRFLGTSGQNIDDLKKYSEARDELEFMERTLKWRHLAPTAPNT 365

Query: 442  LGCYPFTDRDPFFMESCPHVYFAGNQESFATRLITGSEGQVVRLVTIPRFSETGVAVLLN 263
            LGCYPFTD+DPF +ESCPHVYF GNQ+ + T ++ GSEGQ+VRL+++P+F +TG+AV+LN
Sbjct: 366  LGCYPFTDKDPFLIESCPHVYFVGNQDKYGTHILNGSEGQLVRLISVPKFCDTGIAVVLN 425

Query: 262  MRNLECHALSFGTQFS 215
            +RNLECH LSFG QFS
Sbjct: 426  LRNLECHTLSFGAQFS 441