BLASTX nr result

ID: Bupleurum21_contig00011219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011219
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|2...   221   2e-55
ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Rici...   218   1e-54
ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|2...   215   1e-53
ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vit...   210   3e-52
ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. l...   209   5e-52

>ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|222855073|gb|EEE92620.1|
            predicted protein [Populus trichocarpa]
          Length = 877

 Score =  221 bits (563), Expect = 2e-55
 Identities = 115/195 (58%), Positives = 136/195 (69%)
 Frame = +2

Query: 2    MDLLSIGTAPTQXXXXXXXXXXXXXXXXTLIGALENLSIHSTNPVQTSSAPGGFPVMDLL 181
            +DLLSIG  P Q                + I  L+ LS  S+   Q +S+    P+MDLL
Sbjct: 683  LDLLSIGVPPVQSSSSTTDILSPIQNEKSPIATLDALSSSSSPSAQATSSARAAPMMDLL 742

Query: 182  DGLPPSEQKAVDNGLTYPSVVAYESSSLRVSFKFLKQPGNVQTTFVEANFENKSSEVYTD 361
            DG  PS  K  +NG  YP  VA+ESSSLR++F F KQPGN QTT V+A F N +  V+TD
Sbjct: 743  DGFGPSPSKPENNGSVYPPFVAFESSSLRITFNFSKQPGNPQTTLVQATFTNLTPNVFTD 802

Query: 362  FIFQAAVPKFLQLQLDPASNNVLPASGNGSITQNLRVINSQHGKKSLVMRIRISYKLNDK 541
            FIFQAAVPKFLQL LDPAS+N+LPASGNGSITQN+RV N+QHGKKSLVMR RISYK+N+K
Sbjct: 803  FIFQAAVPKFLQLHLDPASSNILPASGNGSITQNMRVTNNQHGKKSLVMRTRISYKINNK 862

Query: 542  DNLEEGQISNFPSGL 586
            D LEEG I+NFP  L
Sbjct: 863  DTLEEGHINNFPREL 877


>ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
            gi|223539863|gb|EEF41443.1| AP-1 complex subunit gamma-2,
            putative [Ricinus communis]
          Length = 875

 Score =  218 bits (555), Expect = 1e-54
 Identities = 115/195 (58%), Positives = 135/195 (69%)
 Frame = +2

Query: 2    MDLLSIGTAPTQXXXXXXXXXXXXXXXXTLIGALENLSIHSTNPVQTSSAPGGFPVMDLL 181
            +DLLSIGT P Q                T I  L+ LS    +  Q  S+ G  P+MDLL
Sbjct: 682  LDLLSIGTPPVQSSSSTSDLLLSGQDNQTPITTLDALSSPFPS-AQVKSSVGASPMMDLL 740

Query: 182  DGLPPSEQKAVDNGLTYPSVVAYESSSLRVSFKFLKQPGNVQTTFVEANFENKSSEVYTD 361
            DG  PS  K  +NG  YPS+VA+ESS+LR++F F K PGN QTT ++A F N S   +TD
Sbjct: 741  DGFGPSPSKHEENGTVYPSIVAFESSNLRMTFNFSKSPGNPQTTIIQATFANLSPNAFTD 800

Query: 362  FIFQAAVPKFLQLQLDPASNNVLPASGNGSITQNLRVINSQHGKKSLVMRIRISYKLNDK 541
            F+FQAAVPKFLQL LDPAS+N LPASGNGS+TQNLRV NSQHGKK LVMRIRI+YK+N K
Sbjct: 801  FVFQAAVPKFLQLHLDPASSNTLPASGNGSLTQNLRVTNSQHGKKPLVMRIRIAYKMNGK 860

Query: 542  DNLEEGQISNFPSGL 586
            D LEEGQI+NFP  L
Sbjct: 861  DMLEEGQINNFPRDL 875


>ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|222868163|gb|EEF05294.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score =  215 bits (547), Expect = 1e-53
 Identities = 114/195 (58%), Positives = 137/195 (70%)
 Frame = +2

Query: 2    MDLLSIGTAPTQXXXXXXXXXXXXXXXXTLIGALENLSIHSTNPVQTSSAPGGFPVMDLL 181
            +DLLSIGT P Q                + I  L+ LS  S+   Q +S+    P+MDLL
Sbjct: 680  LDLLSIGT-PVQSSSPTTDILSSSQNDKSPIATLDALSSPSSLSAQATSSARAAPMMDLL 738

Query: 182  DGLPPSEQKAVDNGLTYPSVVAYESSSLRVSFKFLKQPGNVQTTFVEANFENKSSEVYTD 361
            DG  PS  K  DNG  YP +VA++SSSLR++F F KQPGN QTT ++A F N +  V+TD
Sbjct: 739  DGFGPSPPKPEDNGSVYPPLVAFQSSSLRITFNFSKQPGNPQTTLIQATFTNLTPNVFTD 798

Query: 362  FIFQAAVPKFLQLQLDPASNNVLPASGNGSITQNLRVINSQHGKKSLVMRIRISYKLNDK 541
            FIFQAAVPKFLQL LDPAS+N+LPASGNG+ITQNLRV NSQHGKKSLVMR R+SYK ++K
Sbjct: 799  FIFQAAVPKFLQLHLDPASSNILPASGNGAITQNLRVTNSQHGKKSLVMRTRMSYKFDNK 858

Query: 542  DNLEEGQISNFPSGL 586
              LEEGQI+NFP  L
Sbjct: 859  VTLEEGQINNFPQDL 873


>ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vitis vinifera]
            gi|296086533|emb|CBI32122.3| unnamed protein product
            [Vitis vinifera]
          Length = 878

 Score =  210 bits (535), Expect = 3e-52
 Identities = 115/196 (58%), Positives = 133/196 (67%), Gaps = 1/196 (0%)
 Frame = +2

Query: 2    MDLLSIGTAP-TQXXXXXXXXXXXXXXXXTLIGALENLSIHSTNPVQTSSAPGGFPVMDL 178
            +DLLSIGT P  Q                     LE LS  S+  +Q SS  G  P+MDL
Sbjct: 683  LDLLSIGTPPPAQSSLSTPDILSSSQDNKMPAPTLERLSSPSSISIQASSPAGAAPMMDL 742

Query: 179  LDGLPPSEQKAVDNGLTYPSVVAYESSSLRVSFKFLKQPGNVQTTFVEANFENKSSEVYT 358
            LDG  P+     DNG  YPS+VA+ESS+LR++F F K P N QTT V+A+F N S  ++T
Sbjct: 743  LDGFAPNLPLPEDNGPVYPSIVAFESSALRLTFNFSKTPANPQTTLVQASFTNLSPNIFT 802

Query: 359  DFIFQAAVPKFLQLQLDPASNNVLPASGNGSITQNLRVINSQHGKKSLVMRIRISYKLND 538
            DFIFQAAVPKFLQL LD AS N LPASGNGSITQNLRV NS HGKK LVMRIRI+YK+N+
Sbjct: 803  DFIFQAAVPKFLQLHLDSASGNTLPASGNGSITQNLRVTNSLHGKKPLVMRIRIAYKMNN 862

Query: 539  KDNLEEGQISNFPSGL 586
            KD LEEGQI+NFP  L
Sbjct: 863  KDVLEEGQINNFPRDL 878


>ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297336442|gb|EFH66859.1| GAMMA-ADAPTIN 1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 876

 Score =  209 bits (533), Expect = 5e-52
 Identities = 117/196 (59%), Positives = 134/196 (68%), Gaps = 1/196 (0%)
 Frame = +2

Query: 2    MDLLSIGT-APTQXXXXXXXXXXXXXXXXTLIGALENLSIHSTNPVQTSSAPGGFPVMDL 178
            MD+LSIGT +P Q                    AL+ LS  +   V T+S+ G F   DL
Sbjct: 684  MDILSIGTPSPAQNSTSSVDLLSTADVNSNPSIALDTLSSPAPPHVATTSSNGMF---DL 740

Query: 179  LDGLPPSEQKAVDNGLTYPSVVAYESSSLRVSFKFLKQPGNVQTTFVEANFENKSSEVYT 358
            L GL PS  K   NG  YP +VAYESSSL++ F F K PGN+Q+T V+A F N S   +T
Sbjct: 741  LHGLSPSPSKEATNGPAYPPIVAYESSSLKIEFTFSKAPGNLQSTNVQATFTNLSPNTFT 800

Query: 359  DFIFQAAVPKFLQLQLDPASNNVLPASGNGSITQNLRVINSQHGKKSLVMRIRISYKLND 538
            DFIFQAAVPKFLQL LDPAS+N LPASGNG+ITQNLRV NSQHGKKSLVMR+RI YKLN 
Sbjct: 801  DFIFQAAVPKFLQLHLDPASSNTLPASGNGAITQNLRVTNSQHGKKSLVMRMRIGYKLNG 860

Query: 539  KDNLEEGQISNFPSGL 586
            KD LEEGQ+SNFP GL
Sbjct: 861  KDVLEEGQVSNFPRGL 876


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