BLASTX nr result

ID: Bupleurum21_contig00011206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011206
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28471.3| unnamed protein product [Vitis vinifera]              353   4e-95
ref|XP_002264882.1| PREDICTED: U-box domain-containing protein 4...   353   4e-95
ref|XP_002320533.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94
ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3...   342   9e-92
ref|XP_003544866.1| PREDICTED: U-box domain-containing protein 4...   341   2e-91

>emb|CBI28471.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  353 bits (906), Expect = 4e-95
 Identities = 188/239 (78%), Positives = 208/239 (87%)
 Frame = -2

Query: 1048 AAILTLSSAPPNKPIIVASGASSLLVQILSSASLQGRVDAVTALHNLSTCTEDPVLVLDA 869
            AAILTLS+A PNK  I ASGA+ LLVQILSS S+QG+VDAVTALH LS+CTE    V+DA
Sbjct: 124  AAILTLSAAAPNKLTIAASGAAPLLVQILSSGSVQGKVDAVTALHYLSSCTEATTPVIDA 183

Query: 868  RAVPPLINLLKECKKYSKFAEKTTALLNKLSLSEEGKTAITNVNGGILTLVETVEDGSLI 689
            RAV PLI LLK+CKKYSKFAEKTTALL  LS SEEG+TAI+N +GGILTLVET+EDGSL+
Sbjct: 184  RAVSPLIKLLKDCKKYSKFAEKTTALLEILSKSEEGQTAISNSDGGILTLVETIEDGSLV 243

Query: 688  STEHAVGALLALCQSSRDKYRELILQEGAIPGLLRLTVEGTPEAQYRARTLLDLLRDSPP 509
            STEHAVGALL+LCQS R+KYRELIL+EGAIPGLLRLTVEGTPEAQ RAR LLDLLRDSPP
Sbjct: 244  STEHAVGALLSLCQSCRNKYRELILKEGAIPGLLRLTVEGTPEAQERARMLLDLLRDSPP 303

Query: 508  EKKPASSVLERIVYDIATRVDESDKAVETAKRLLHDMVQKSMELSMSNIQLKASSCAPS 332
            EK+ ASSVLERI YDIA RVD SDKA ETAKRLL DMV +SMELS+  IQ +A+SC PS
Sbjct: 304  EKRLASSVLERIAYDIAARVDGSDKAAETAKRLLQDMVHRSMELSLGRIQRRAASCTPS 362


>ref|XP_002264882.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 376

 Score =  353 bits (906), Expect = 4e-95
 Identities = 188/239 (78%), Positives = 208/239 (87%)
 Frame = -2

Query: 1048 AAILTLSSAPPNKPIIVASGASSLLVQILSSASLQGRVDAVTALHNLSTCTEDPVLVLDA 869
            AAILTLS+A PNK  I ASGA+ LLVQILSS S+QG+VDAVTALH LS+CTE    V+DA
Sbjct: 133  AAILTLSAAAPNKLTIAASGAAPLLVQILSSGSVQGKVDAVTALHYLSSCTEATTPVIDA 192

Query: 868  RAVPPLINLLKECKKYSKFAEKTTALLNKLSLSEEGKTAITNVNGGILTLVETVEDGSLI 689
            RAV PLI LLK+CKKYSKFAEKTTALL  LS SEEG+TAI+N +GGILTLVET+EDGSL+
Sbjct: 193  RAVSPLIKLLKDCKKYSKFAEKTTALLEILSKSEEGQTAISNSDGGILTLVETIEDGSLV 252

Query: 688  STEHAVGALLALCQSSRDKYRELILQEGAIPGLLRLTVEGTPEAQYRARTLLDLLRDSPP 509
            STEHAVGALL+LCQS R+KYRELIL+EGAIPGLLRLTVEGTPEAQ RAR LLDLLRDSPP
Sbjct: 253  STEHAVGALLSLCQSCRNKYRELILKEGAIPGLLRLTVEGTPEAQERARMLLDLLRDSPP 312

Query: 508  EKKPASSVLERIVYDIATRVDESDKAVETAKRLLHDMVQKSMELSMSNIQLKASSCAPS 332
            EK+ ASSVLERI YDIA RVD SDKA ETAKRLL DMV +SMELS+  IQ +A+SC PS
Sbjct: 313  EKRLASSVLERIAYDIAARVDGSDKAAETAKRLLQDMVHRSMELSLGRIQRRAASCTPS 371


>ref|XP_002320533.1| predicted protein [Populus trichocarpa] gi|222861306|gb|EEE98848.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  350 bits (898), Expect = 3e-94
 Identities = 186/243 (76%), Positives = 213/243 (87%)
 Frame = -2

Query: 1048 AAILTLSSAPPNKPIIVASGASSLLVQILSSASLQGRVDAVTALHNLSTCTEDPVLVLDA 869
            A+ILTLS+A PNKPII ASGA+ LLVQILSS S+QG+VDAVT LHNLS+C E+   ++D 
Sbjct: 136  ASILTLSAAEPNKPIIAASGAAPLLVQILSSGSVQGKVDAVTVLHNLSSCAENIHPIVDG 195

Query: 868  RAVPPLINLLKECKKYSKFAEKTTALLNKLSLSEEGKTAITNVNGGILTLVETVEDGSLI 689
            +AV PLINLLKECKKYSKFAEK TALL  LS SEEG+ AIT+ +GGILTLVETVEDGSL+
Sbjct: 196  KAVSPLINLLKECKKYSKFAEKATALLEILSNSEEGRIAITDSDGGILTLVETVEDGSLV 255

Query: 688  STEHAVGALLALCQSSRDKYRELILQEGAIPGLLRLTVEGTPEAQYRARTLLDLLRDSPP 509
            STEHAVGALL+LCQS R+KYRELIL+EGAIPGLLRLTVEGT +AQ RARTLLDLLRD+P 
Sbjct: 256  STEHAVGALLSLCQSCREKYRELILKEGAIPGLLRLTVEGTSKAQDRARTLLDLLRDTPQ 315

Query: 508  EKKPASSVLERIVYDIATRVDESDKAVETAKRLLHDMVQKSMELSMSNIQLKASSCAPSD 329
            EK+ +SSVLERIVY+IATRVD SDKA ETAKRLL DMVQ+SMELSM++IQ +A+SC PS 
Sbjct: 316  EKRLSSSVLERIVYNIATRVDGSDKAAETAKRLLQDMVQRSMELSMNSIQHRAASCTPSK 375

Query: 328  TTS 320
              S
Sbjct: 376  IPS 378


>ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 381

 Score =  342 bits (877), Expect = 9e-92
 Identities = 185/243 (76%), Positives = 206/243 (84%)
 Frame = -2

Query: 1051 TAAILTLSSAPPNKPIIVASGASSLLVQILSSASLQGRVDAVTALHNLSTCTEDPVLVLD 872
            TAAILTLS+A  NKPII ASGA  LLVQIL S S+QG+VDAVTALHNLST  E+ + +LD
Sbjct: 139  TAAILTLSAATSNKPIIAASGAGPLLVQILKSGSVQGKVDAVTALHNLSTGIENSIELLD 198

Query: 871  ARAVPPLINLLKECKKYSKFAEKTTALLNKLSLSEEGKTAITNVNGGILTLVETVEDGSL 692
            A AV PL+NLLKECKKYSKFAEK TALL  LS SEEG+TAI+  +GGILTLVETVEDGSL
Sbjct: 199  ASAVFPLLNLLKECKKYSKFAEKATALLEILSNSEEGRTAISIADGGILTLVETVEDGSL 258

Query: 691  ISTEHAVGALLALCQSSRDKYRELILQEGAIPGLLRLTVEGTPEAQYRARTLLDLLRDSP 512
            +STEHAVG LL+LC+S RDKYRELIL+EGAIPGLLRLTVEGT EAQ RAR LLDLLRDSP
Sbjct: 259  VSTEHAVGTLLSLCRSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARVLLDLLRDSP 318

Query: 511  PEKKPASSVLERIVYDIATRVDESDKAVETAKRLLHDMVQKSMELSMSNIQLKASSCAPS 332
            PEK+  SSVLE+IVYDIA RVD +DKA ETAKRLL DMVQ+SME SM  IQ +A+SC P 
Sbjct: 319  PEKRLTSSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEHSMKCIQHRAASCTPI 378

Query: 331  DTT 323
             +T
Sbjct: 379  PST 381


>ref|XP_003544866.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 379

 Score =  341 bits (875), Expect = 2e-91
 Identities = 184/240 (76%), Positives = 205/240 (85%)
 Frame = -2

Query: 1051 TAAILTLSSAPPNKPIIVASGASSLLVQILSSASLQGRVDAVTALHNLSTCTEDPVLVLD 872
            TAAILTLS+A  NKPII ASGA+ LLVQIL S S+QG+VDAVTALHNLST   + + +LD
Sbjct: 136  TAAILTLSAAASNKPIIAASGAAPLLVQILKSGSVQGKVDAVTALHNLSTSIANSIELLD 195

Query: 871  ARAVPPLINLLKECKKYSKFAEKTTALLNKLSLSEEGKTAITNVNGGILTLVETVEDGSL 692
            A AV PL+NLLKECKKYSKFAEK TALL  LS SEEG+TAI+  +GGILTLVETVEDGSL
Sbjct: 196  ASAVFPLLNLLKECKKYSKFAEKATALLEILSNSEEGRTAISIADGGILTLVETVEDGSL 255

Query: 691  ISTEHAVGALLALCQSSRDKYRELILQEGAIPGLLRLTVEGTPEAQYRARTLLDLLRDSP 512
            +STEHAVG LL+LC+S RDKYRELIL+EGAIPGLLRLTVEGT EAQ RAR LLDLLRDSP
Sbjct: 256  VSTEHAVGTLLSLCRSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARVLLDLLRDSP 315

Query: 511  PEKKPASSVLERIVYDIATRVDESDKAVETAKRLLHDMVQKSMELSMSNIQLKASSCAPS 332
            PEK+  SSVLE+IVYDIA RVD +DKA ETAKRLL DMVQ+SME SM  IQ +A+SC PS
Sbjct: 316  PEKRLTSSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEHSMKCIQHRAASCTPS 375


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