BLASTX nr result

ID: Bupleurum21_contig00011202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011202
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298123.1| pleiotropic drug resistance,  ABC transporte...   214   8e-54
ref|XP_002527329.1| ATP-binding cassette transporter, putative [...   213   1e-53
ref|XP_003569333.1| PREDICTED: pleiotropic drug resistance prote...   210   8e-53
ref|XP_003569332.1| PREDICTED: pleiotropic drug resistance prote...   210   8e-53
ref|XP_003569331.1| PREDICTED: pleiotropic drug resistance prote...   210   8e-53

>ref|XP_002298123.1| pleiotropic drug resistance,  ABC transporter family protein [Populus
            trichocarpa] gi|222845381|gb|EEE82928.1| pleiotropic drug
            resistance, ABC transporter family protein [Populus
            trichocarpa]
          Length = 1424

 Score =  214 bits (544), Expect = 8e-54
 Identities = 108/131 (82%), Positives = 113/131 (86%)
 Frame = -3

Query: 394  TLMDVLAGRKTGGYITGNITVSGYTKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWL 215
            T+MDVLAGRKTGGYI GNIT+SGY KKQETFARISGYCEQNDIHSP++TVYESLLYSAWL
Sbjct: 880  TMMDVLAGRKTGGYIEGNITISGYPKKQETFARISGYCEQNDIHSPHITVYESLLYSAWL 939

Query: 214  RLPTEVDSAKRKMFXXXXXXXXXXXXLKNALVGLPGVDGLSTEQRKRLTIAVELVANPSI 35
            RLPTEVD   RKMF            L+ ALVGLPGVDGLSTEQRKRLTIAVELVANPSI
Sbjct: 940  RLPTEVDIETRKMFVEEVMELVELNPLRQALVGLPGVDGLSTEQRKRLTIAVELVANPSI 999

Query: 34   IFMDEPTSGLD 2
            IFMDEPTSGLD
Sbjct: 1000 IFMDEPTSGLD 1010


>ref|XP_002527329.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223533329|gb|EEF35081.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1434

 Score =  213 bits (542), Expect = 1e-53
 Identities = 107/131 (81%), Positives = 113/131 (86%)
 Frame = -3

Query: 394  TLMDVLAGRKTGGYITGNITVSGYTKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWL 215
            TLMDVLAGRKTGGYI GNIT+SGY KKQETFARISGYCEQNDIHSP+VTVYESL+YSAWL
Sbjct: 889  TLMDVLAGRKTGGYIEGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWL 948

Query: 214  RLPTEVDSAKRKMFXXXXXXXXXXXXLKNALVGLPGVDGLSTEQRKRLTIAVELVANPSI 35
            RLP EVDS  RKMF             +N+LVGLPGV+GLSTEQRKRLTIAVELVANPSI
Sbjct: 949  RLPAEVDSDTRKMFVEEVIDLVELNAQRNSLVGLPGVNGLSTEQRKRLTIAVELVANPSI 1008

Query: 34   IFMDEPTSGLD 2
            IFMDEPTSGLD
Sbjct: 1009 IFMDEPTSGLD 1019


>ref|XP_003569333.1| PREDICTED: pleiotropic drug resistance protein 4-like isoform 3
            [Brachypodium distachyon]
          Length = 1391

 Score =  210 bits (535), Expect = 8e-53
 Identities = 106/131 (80%), Positives = 115/131 (87%)
 Frame = -3

Query: 394  TLMDVLAGRKTGGYITGNITVSGYTKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWL 215
            TLMDVLAGRKTGGYI G+IT+SGY KKQETFARISGYCEQNDIHSP+VTVYESL++SAWL
Sbjct: 843  TLMDVLAGRKTGGYIEGDITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWL 902

Query: 214  RLPTEVDSAKRKMFXXXXXXXXXXXXLKNALVGLPGVDGLSTEQRKRLTIAVELVANPSI 35
            RLP+EVDS +RKMF            L+ ALVGLPGV+GLSTEQRKRLTIAVELVANPSI
Sbjct: 903  RLPSEVDSERRKMFIEEVMDLVELTSLRGALVGLPGVNGLSTEQRKRLTIAVELVANPSI 962

Query: 34   IFMDEPTSGLD 2
            IFMDEPTSGLD
Sbjct: 963  IFMDEPTSGLD 973


>ref|XP_003569332.1| PREDICTED: pleiotropic drug resistance protein 4-like isoform 2
            [Brachypodium distachyon]
          Length = 1446

 Score =  210 bits (535), Expect = 8e-53
 Identities = 106/131 (80%), Positives = 115/131 (87%)
 Frame = -3

Query: 394  TLMDVLAGRKTGGYITGNITVSGYTKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWL 215
            TLMDVLAGRKTGGYI G+IT+SGY KKQETFARISGYCEQNDIHSP+VTVYESL++SAWL
Sbjct: 898  TLMDVLAGRKTGGYIEGDITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWL 957

Query: 214  RLPTEVDSAKRKMFXXXXXXXXXXXXLKNALVGLPGVDGLSTEQRKRLTIAVELVANPSI 35
            RLP+EVDS +RKMF            L+ ALVGLPGV+GLSTEQRKRLTIAVELVANPSI
Sbjct: 958  RLPSEVDSERRKMFIEEVMDLVELTSLRGALVGLPGVNGLSTEQRKRLTIAVELVANPSI 1017

Query: 34   IFMDEPTSGLD 2
            IFMDEPTSGLD
Sbjct: 1018 IFMDEPTSGLD 1028


>ref|XP_003569331.1| PREDICTED: pleiotropic drug resistance protein 4-like isoform 1
            [Brachypodium distachyon]
          Length = 1445

 Score =  210 bits (535), Expect = 8e-53
 Identities = 106/131 (80%), Positives = 115/131 (87%)
 Frame = -3

Query: 394  TLMDVLAGRKTGGYITGNITVSGYTKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWL 215
            TLMDVLAGRKTGGYI G+IT+SGY KKQETFARISGYCEQNDIHSP+VTVYESL++SAWL
Sbjct: 897  TLMDVLAGRKTGGYIEGDITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWL 956

Query: 214  RLPTEVDSAKRKMFXXXXXXXXXXXXLKNALVGLPGVDGLSTEQRKRLTIAVELVANPSI 35
            RLP+EVDS +RKMF            L+ ALVGLPGV+GLSTEQRKRLTIAVELVANPSI
Sbjct: 957  RLPSEVDSERRKMFIEEVMDLVELTSLRGALVGLPGVNGLSTEQRKRLTIAVELVANPSI 1016

Query: 34   IFMDEPTSGLD 2
            IFMDEPTSGLD
Sbjct: 1017 IFMDEPTSGLD 1027


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