BLASTX nr result

ID: Bupleurum21_contig00011184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011184
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002314164.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   116   2e-24
ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]   113   2e-23
ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]   112   2e-23

>ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|222847117|gb|EEE84664.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/89 (71%), Positives = 73/89 (82%)
 Frame = -1

Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90
           ELGRRPM+  N+GSFGDDLEKEIGLLLREQRR   +DD EKELN YRSGSAPPTVEGSL+
Sbjct: 4   ELGRRPMIGANDGSFGDDLEKEIGLLLREQRRQE-ADDREKELNLYRSGSAPPTVEGSLN 62

Query: 89  AVGGLFNQGGSRGSLFPEFALNNKSGNVF 3
           AVGGLF  GG+ G+ F +F +  K+GN F
Sbjct: 63  AVGGLFGGGGNGGASFSDF-IGGKNGNGF 90


>ref|XP_002314164.1| predicted protein [Populus trichocarpa] gi|222850572|gb|EEE88119.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/89 (71%), Positives = 73/89 (82%)
 Frame = -1

Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90
           ELGRRPM+  N+GSFGDDLEKE+GLLLREQRR   +DD EKELN YRSGSAPPTVEGSL+
Sbjct: 4   ELGRRPMIGANDGSFGDDLEKELGLLLREQRRQE-ADDREKELNLYRSGSAPPTVEGSLN 62

Query: 89  AVGGLFNQGGSRGSLFPEFALNNKSGNVF 3
           AVGGLF  GG  G+ F +FA + K+GN F
Sbjct: 63  AVGGLFGGGGHGGASFSDFA-SGKNGNGF 90


>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/94 (69%), Positives = 72/94 (76%), Gaps = 5/94 (5%)
 Frame = -1

Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90
           ELG RPML  NEGSFGD+LEKEIG+LLREQRR    DD E+ELN YRSGSAPPTVEGSLS
Sbjct: 4   ELGTRPMLGGNEGSFGDELEKEIGMLLREQRRQE-VDDRERELNLYRSGSAPPTVEGSLS 62

Query: 89  AVGGLFNQGG-----SRGSLFPEFALNNKSGNVF 3
           AVGGLF  GG     + G++F EF+   KSGN F
Sbjct: 63  AVGGLFGGGGGGAGTAAGAVFSEFS-GAKSGNGF 95


>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1053

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/73 (78%), Positives = 62/73 (84%)
 Frame = -1

Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90
           ELGRRPML  NEGSFGD+LEKEIG+LLREQRR   +DD E+ELN +RSGSAPPTVEGSLS
Sbjct: 4   ELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQE-ADDRERELNIFRSGSAPPTVEGSLS 62

Query: 89  AVGGLFNQGGSRG 51
           AVGGLF  GG  G
Sbjct: 63  AVGGLFAAGGGGG 75


>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1033

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -1

Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90
           ELGRRPML  NEGSFGD+LEKEIG+LLREQRR   +DD E+ELN +RSGSAPPTV+GSLS
Sbjct: 4   ELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQE-ADDRERELNIFRSGSAPPTVDGSLS 62

Query: 89  AVGGLFNQGGSRG--SLFPEF 33
           AVGGLF  GG  G  + F EF
Sbjct: 63  AVGGLFAGGGGGGAPAAFSEF 83


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