BLASTX nr result
ID: Bupleurum21_contig00011184
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00011184 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|2... 124 8e-27 ref|XP_002314164.1| predicted protein [Populus trichocarpa] gi|2... 124 1e-26 ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max] 116 2e-24 ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max] 113 2e-23 ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max] 112 2e-23 >ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|222847117|gb|EEE84664.1| predicted protein [Populus trichocarpa] Length = 1065 Score = 124 bits (311), Expect = 8e-27 Identities = 64/89 (71%), Positives = 73/89 (82%) Frame = -1 Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90 ELGRRPM+ N+GSFGDDLEKEIGLLLREQRR +DD EKELN YRSGSAPPTVEGSL+ Sbjct: 4 ELGRRPMIGANDGSFGDDLEKEIGLLLREQRRQE-ADDREKELNLYRSGSAPPTVEGSLN 62 Query: 89 AVGGLFNQGGSRGSLFPEFALNNKSGNVF 3 AVGGLF GG+ G+ F +F + K+GN F Sbjct: 63 AVGGLFGGGGNGGASFSDF-IGGKNGNGF 90 >ref|XP_002314164.1| predicted protein [Populus trichocarpa] gi|222850572|gb|EEE88119.1| predicted protein [Populus trichocarpa] Length = 998 Score = 124 bits (310), Expect = 1e-26 Identities = 64/89 (71%), Positives = 73/89 (82%) Frame = -1 Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90 ELGRRPM+ N+GSFGDDLEKE+GLLLREQRR +DD EKELN YRSGSAPPTVEGSL+ Sbjct: 4 ELGRRPMIGANDGSFGDDLEKELGLLLREQRRQE-ADDREKELNLYRSGSAPPTVEGSLN 62 Query: 89 AVGGLFNQGGSRGSLFPEFALNNKSGNVF 3 AVGGLF GG G+ F +FA + K+GN F Sbjct: 63 AVGGLFGGGGHGGASFSDFA-SGKNGNGF 90 >ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max] Length = 1054 Score = 116 bits (291), Expect = 2e-24 Identities = 65/94 (69%), Positives = 72/94 (76%), Gaps = 5/94 (5%) Frame = -1 Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90 ELG RPML NEGSFGD+LEKEIG+LLREQRR DD E+ELN YRSGSAPPTVEGSLS Sbjct: 4 ELGTRPMLGGNEGSFGDELEKEIGMLLREQRRQE-VDDRERELNLYRSGSAPPTVEGSLS 62 Query: 89 AVGGLFNQGG-----SRGSLFPEFALNNKSGNVF 3 AVGGLF GG + G++F EF+ KSGN F Sbjct: 63 AVGGLFGGGGGGAGTAAGAVFSEFS-GAKSGNGF 95 >ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max] Length = 1053 Score = 113 bits (282), Expect = 2e-23 Identities = 57/73 (78%), Positives = 62/73 (84%) Frame = -1 Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90 ELGRRPML NEGSFGD+LEKEIG+LLREQRR +DD E+ELN +RSGSAPPTVEGSLS Sbjct: 4 ELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQE-ADDRERELNIFRSGSAPPTVEGSLS 62 Query: 89 AVGGLFNQGGSRG 51 AVGGLF GG G Sbjct: 63 AVGGLFAAGGGGG 75 >ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max] Length = 1033 Score = 112 bits (281), Expect = 2e-23 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -1 Query: 269 ELGRRPMLNENEGSFGDDLEKEIGLLLREQRRNHGSDDLEKELNFYRSGSAPPTVEGSLS 90 ELGRRPML NEGSFGD+LEKEIG+LLREQRR +DD E+ELN +RSGSAPPTV+GSLS Sbjct: 4 ELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQE-ADDRERELNIFRSGSAPPTVDGSLS 62 Query: 89 AVGGLFNQGGSRG--SLFPEF 33 AVGGLF GG G + F EF Sbjct: 63 AVGGLFAGGGGGGAPAAFSEF 83