BLASTX nr result

ID: Bupleurum21_contig00011156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011156
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303668.1| predicted protein [Populus trichocarpa] gi|1...   119   4e-25
ref|NP_001241171.1| uncharacterized protein LOC100785835 [Glycin...   119   5e-25
gb|AFK41352.1| unknown [Lotus japonicus]                              117   2e-24
ref|XP_002518856.1| 26S proteasome non-atpase regulatory subunit...   117   2e-24
ref|XP_002444030.1| hypothetical protein SORBIDRAFT_07g006120 [S...   117   2e-24

>ref|XP_002303668.1| predicted protein [Populus trichocarpa] gi|118488523|gb|ABK96074.1|
           unknown [Populus trichocarpa]
           gi|222841100|gb|EEE78647.1| predicted protein [Populus
           trichocarpa]
          Length = 267

 Score =  119 bits (299), Expect = 4e-25
 Identities = 58/70 (82%), Positives = 63/70 (90%)
 Frame = -3

Query: 666 LSVADARQMLLFKTDKELSEYINEEHPEWEMKNGFVTFQKAKESAPCKEIPSLQLITQTL 487
           LS++DARQMLLF ++ EL EYI EEHPEWE+KNG V FQKAKESAPCKEIPSLQLI QTL
Sbjct: 198 LSISDARQMLLFPSENELLEYIKEEHPEWEIKNGSVVFQKAKESAPCKEIPSLQLINQTL 257

Query: 486 SYARELERIV 457
           SYARELERIV
Sbjct: 258 SYARELERIV 267


>ref|NP_001241171.1| uncharacterized protein LOC100785835 [Glycine max]
           gi|255634606|gb|ACU17665.1| unknown [Glycine max]
          Length = 267

 Score =  119 bits (298), Expect = 5e-25
 Identities = 58/70 (82%), Positives = 63/70 (90%)
 Frame = -3

Query: 666 LSVADARQMLLFKTDKELSEYINEEHPEWEMKNGFVTFQKAKESAPCKEIPSLQLITQTL 487
           LS+ DA+QMLLF +D+EL EYI EEHPEWE+KNG V FQKAKESAPCKEIPSLQLI QTL
Sbjct: 198 LSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNGSVFFQKAKESAPCKEIPSLQLINQTL 257

Query: 486 SYARELERIV 457
           SYARELERIV
Sbjct: 258 SYARELERIV 267


>gb|AFK41352.1| unknown [Lotus japonicus]
          Length = 124

 Score =  117 bits (294), Expect = 2e-24
 Identities = 57/70 (81%), Positives = 63/70 (90%)
 Frame = -3

Query: 666 LSVADARQMLLFKTDKELSEYINEEHPEWEMKNGFVTFQKAKESAPCKEIPSLQLITQTL 487
           LS+ DARQ+LL+ +D+EL EYI EEHPEWE+KNG V FQKAKESAPCKEIPSLQLI QTL
Sbjct: 55  LSIKDARQILLYSSDQELLEYIKEEHPEWEIKNGSVFFQKAKESAPCKEIPSLQLINQTL 114

Query: 486 SYARELERIV 457
           SYARELERIV
Sbjct: 115 SYARELERIV 124


>ref|XP_002518856.1| 26S proteasome non-atpase regulatory subunit, putative [Ricinus
           communis] gi|223541843|gb|EEF43389.1| 26S proteasome
           non-atpase regulatory subunit, putative [Ricinus
           communis]
          Length = 267

 Score =  117 bits (294), Expect = 2e-24
 Identities = 57/70 (81%), Positives = 62/70 (88%)
 Frame = -3

Query: 666 LSVADARQMLLFKTDKELSEYINEEHPEWEMKNGFVTFQKAKESAPCKEIPSLQLITQTL 487
           LS+ DARQMLLF +D EL +YI E+HPEWE+KNG V FQKAKESAPCKEIPSLQLI QTL
Sbjct: 198 LSINDARQMLLFSSDTELLQYIKEDHPEWEVKNGVVIFQKAKESAPCKEIPSLQLINQTL 257

Query: 486 SYARELERIV 457
           SYARELERIV
Sbjct: 258 SYARELERIV 267


>ref|XP_002444030.1| hypothetical protein SORBIDRAFT_07g006120 [Sorghum bicolor]
           gi|241940380|gb|EES13525.1| hypothetical protein
           SORBIDRAFT_07g006120 [Sorghum bicolor]
          Length = 267

 Score =  117 bits (293), Expect = 2e-24
 Identities = 56/70 (80%), Positives = 64/70 (91%)
 Frame = -3

Query: 666 LSVADARQMLLFKTDKELSEYINEEHPEWEMKNGFVTFQKAKESAPCKEIPSLQLITQTL 487
           LSV+DA+QML+F +D++L EYI+EEHPEWE+KNG V FQKAKES PCKEIPSLQLI QTL
Sbjct: 198 LSVSDAKQMLMFNSDQDLHEYISEEHPEWEIKNGAVFFQKAKESQPCKEIPSLQLINQTL 257

Query: 486 SYARELERIV 457
           SYARELERIV
Sbjct: 258 SYARELERIV 267


Top